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Status |
Public on Jun 23, 2013 |
Title |
Expression data from FDC-induced myeloid cells (FDMCs) |
Organism |
Mus musculus |
Experiment type |
Expression profiling by array Third-party reanalysis
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Summary |
We observed that follicular dendritic cell line induced a new type of CD11b+ myeloid cells (FDMCs) when cultured with a lineage-negative c-kit+ population from mouse spleen cells. Thus, we used microarrays to characterize gene expression of FDMCs.
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Overall design |
FDMCs were induced on FDC line for RNA extraction and hybridization on Affymetrix microarrays. Microarray data of "FDC-induced myeloid cells (FDMCs)" sample were combined with a large collection of other cell- and tissue-specific gene expression data sets (total: 205 individual data sets). Raw data (.cel) files were normalized using Robust Multichip Analysis (RMA Express; http://rmaexpress.bmbolstad.com/), annotated using the latest libraries available from Affymetrix, and arranged according to cell-type grouping.
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Contributor(s) |
Magari M, Mabbott NA, Ohmori H |
Citation(s) |
24052571 |
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Submission date |
Apr 02, 2013 |
Last update date |
Feb 11, 2019 |
Contact name |
Masaki Magari |
E-mail(s) |
magari@cc.okayama-u.ac.jp
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Organization name |
Okayama University
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Street address |
3-1-1, Tsushima-naka, Kita-ku
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City |
Okayama-shi |
ZIP/Postal code |
700-8530 |
Country |
Japan |
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Platforms (1) |
GPL1261 |
[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array |
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Samples (1) |
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BioProject |
PRJNA196693 |