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| Status |
Public on Mar 01, 2007 |
| Title |
expression profiling of wild type and the hy5 mutant in arabidopsis |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
|
| Summary |
To determine the functional relevance of the HY5 binding sites to the transcriptional regulation, we performed genome wide expression analysis using WT and hy5 grown in continuous white light for 4 days.
Keywords: mutant/widetype comparative
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| Overall design |
For this analysis, we used 70mer oligo microarray that covers 25,676 unique genes (Ma et al. 2005). Four biological replicate experiments were done with dye-swap design.
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| |
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| Contributor(s) |
Lee J, He K, Lee I, Deng X |
| Citation(s) |
17337630 |
| |
| Submission date |
Dec 13, 2006 |
| Last update date |
Mar 16, 2012 |
| Contact name |
Kun He |
| E-mail(s) |
hek@mail.cbi.pku.edu.cn
|
| Phone |
203-432-8909
|
| Organization name |
Yale University
|
| Department |
Molecular, Cellular & Developmental Biology
|
| Lab |
Denglab
|
| Street address |
165 Prospect
|
| City |
New Haven |
| State/province |
CT |
| ZIP/Postal code |
06520 |
| Country |
USA |
| |
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| Platforms (1) |
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| Samples (4)
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| GSM149828 |
hy5 mutant vs wildtype expression, rep1 |
| GSM149830 |
hy5 mutant vs wildtype expression, rep2 |
| GSM149834 |
hy5 mutant vs wildtype expression, rep3 |
| GSM149840 |
hy5 mutant vs wildtype expression, rep4 |
|
| Relations |
| BioProject |
PRJNA98605 |
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