Search Toolkit Book for CGraph_CI
#include <objmgr/graph_ci.hpp>
Inheritance diagram for CGraph_CI:
Collaboration diagram for CGraph_CI:
Public Member Functions | |
| CGraph_CI (void) | |
| Create an empty iterator. More... | |
| CGraph_CI (const CBioseq_Handle &bioseq) | |
| Create an iterator that enumerates CSeq_graph objects related to the given bioseq. More... | |
| CGraph_CI (const CBioseq_Handle &bioseq, const SAnnotSelector &sel) | |
| Create an iterator that enumerates CSeq_graph objects related to the given bioseq. More... | |
| CGraph_CI (const CBioseq_Handle &bioseq, const CRange< TSeqPos > &range, ENa_strand strand=eNa_strand_unknown) | |
| Create an iterator that enumerates CSeq_graph objects related to the given bioseq. More... | |
| CGraph_CI (const CBioseq_Handle &bioseq, const CRange< TSeqPos > &range, const SAnnotSelector &sel) | |
| Create an iterator that enumerates CSeq_graph objects related to the given bioseq. More... | |
| CGraph_CI (const CBioseq_Handle &bioseq, const CRange< TSeqPos > &range, ENa_strand strand, const SAnnotSelector &sel) | |
| Create an iterator that enumerates CSeq_graph objects related to the given bioseq. More... | |
| CGraph_CI (CScope &scope, const CSeq_loc &loc) | |
| Create an iterator that enumerates CSeq_graph objects related to the given seq-loc. More... | |
| CGraph_CI (CScope &scope, const CSeq_loc &loc, const SAnnotSelector &sel) | |
| Create an iterator that enumerates CSeq_graph objects related to the given seq-loc. More... | |
| CGraph_CI (const CSeq_annot_Handle &annot) | |
| Iterate all graphs from the seq-annot regardless of their location. More... | |
| CGraph_CI (const CSeq_annot_Handle &annot, const SAnnotSelector &sel) | |
| Iterate all graphs from the seq-annot regardless of their location. More... | |
| CGraph_CI (const CSeq_loc &loc, const CSeq_annot_Handle &annot) | |
| Iterate all graphs from the seq-annot that annotate the location. More... | |
| CGraph_CI (const CSeq_loc &loc, const CSeq_annot_Handle &annot, const SAnnotSelector &sel) | |
| Iterate all graphs from the seq-annot that annotate the location. More... | |
| CGraph_CI (const CSeq_entry_Handle &entry) | |
| Iterate all graphs from the seq-entry regardless of their location. More... | |
| CGraph_CI (const CSeq_entry_Handle &entry, const SAnnotSelector &sel) | |
| Iterate all graphs from the seq-entry regardless of their location. More... | |
| CGraph_CI (const CGraph_CI &iter) | |
| CGraph_CI & | operator= (const CGraph_CI &iter) |
| virtual | ~CGraph_CI (void) |
| CGraph_CI & | operator++ (void) |
| CGraph_CI & | operator-- (void) |
| void | Rewind (void) |
| DECLARE_OPERATOR_BOOL (IsValid()) | |
| const CGraph_CI & | begin () const |
| CGraph_CI | end () const |
| bool | operator!= (const CGraph_CI &it) const |
| const CMappedGraph & | operator* (void) const |
| const CMappedGraph * | operator-> (void) const |
| Public Member Functions inherited from CAnnotTypes_CI | |
| CAnnotTypes_CI (void) | |
| CAnnotTypes_CI (CScope &scope) | |
| CAnnotTypes_CI (TAnnotType type, const CBioseq_Handle &bioseq, const CRange< TSeqPos > &range, ENa_strand strand, const SAnnotSelector *params=0) | |
| CAnnotTypes_CI (TAnnotType type, CScope &scope, const CSeq_loc &loc, const SAnnotSelector *params=0) | |
| CAnnotTypes_CI (TAnnotType type, const CSeq_annot_Handle &annot, const SAnnotSelector *params=0) | |
| CAnnotTypes_CI (TAnnotType type, const CSeq_loc &loc, const CSeq_annot_Handle &annot, const SAnnotSelector *params=0) | |
| CAnnotTypes_CI (TAnnotType type, const CSeq_entry_Handle &entry, const SAnnotSelector *params=0) | |
| virtual | ~CAnnotTypes_CI (void) |
| void | Rewind (void) |
| CSeq_annot_Handle | GetAnnot (void) const |
| const CSeq_annot_Handle & | GetSeq_annot_Handle (void) const |
| size_t | GetSize (void) const |
| bool | MaxSearchSegmentsLimitIsReached (void) const |
| const TAnnotTypes & | GetAnnotTypes (void) const |
| const TAnnotNames & | GetAnnotNames (void) const |
| Uint8 | GetCostOfLoadingInBytes (void) const |
| Get collected cost of loading requested data in bytes. More... | |
| double | GetCostOfLoadingInSeconds (void) const |
| Get collected cost of loading requested data in seconds. More... | |
Private Member Functions | |
| void | x_Update (void) |
| CGraph_CI | operator++ (int) |
| CGraph_CI | operator-- (int) |
| CGraph_CI (const CGraph_CI &it, EAtEnd) | |
Private Attributes | |
| CMappedGraph | m_Graph |
Additional Inherited Members | |
| Public Types inherited from CAnnotTypes_CI | |
| typedef SAnnotSelector::TAnnotType | TAnnotType |
| typedef vector< SAnnotTypeSelector > | TAnnotTypes |
| typedef set< CAnnotName > | TAnnotNames |
| Protected Types inherited from CAnnotTypes_CI | |
| enum | EAtEnd { at_end } |
| typedef vector< CAnnotObject_Ref > | TAnnotSet |
| typedef TAnnotSet::const_iterator | TIterator |
| Protected Member Functions inherited from CAnnotTypes_CI | |
| bool | IsValid (void) const |
| void | Next (void) |
| void | Prev (void) |
| const CAnnotObject_Ref & | Get (void) const |
| CScope & | GetScope (void) const |
| CAnnot_Collector & | GetCollector (void) |
| const TIterator & | GetIterator (void) const |
| CAnnotTypes_CI (const CAnnotTypes_CI &src, EAtEnd) | |
| bool | operator!= (const CAnnotTypes_CI &it) const |
Detailed Description
CGraph_CI –.
Definition at line 233 of file graph_ci.hpp.
The documentation for this class was generated from the following files:
- include/objmgr/graph_ci.hpp
- src/objmgr/graph_ci.cpp
