GEO DataSets

(Submitter supplied) Transctriptome profiling of CTD-14 repeats, 2A, 5A mutants responding to 0.7N NaCl for 30mins. The study shows that phosphorylation at Ser5 sites plays a role in normal induction and repression of genes upon NaCl stress. The CTD14 strains harbors a plasmid expressing RPB1 with 14 wild-type CTD repeats. 5A strains carries a plasmid expressing a chimeric RPB1 in which the CTD was composed of 5 repeats of CTD-serine 5 substituted with Ala followed by 7 wild-type-sequenced repeats. more...

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array

Platform:

GPL15778

9 Samples

Download data: FTR

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array; Genome binding/occupancy profiling by genome tiling array

Platforms:

GPL17856 GPL15778 GPL9529

92 Samples

Download data: FTR, PAIR, TXT

(Submitter supplied) Transcriptome profiling of cdc14-3 and cdc14-3_snf1 mutants at non-permissive temp (35C) for 90min or 2hr followed by 30min NaCl stress. The experiment showed the aberrant cell cycle induction in cdc14-3 mutants upon NaCl response is abrogated with snf1 deletion in cdc14-3 background.

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array

Platform:

GPL15778

8 Samples

Download data: FTR

(Submitter supplied) A six array study using total gDNA recovered from two separate cultures of each of three different strains of Saccharomyces cerevisiae (YB-210 or CRB, Y389 or MUSH, and Y2209 or LEP) and two separate cultures of Saccharomyces cerevisiae DBY8268. Each array measures the hybridization of probes tiled across the Saccharomyces cerevisiae genome.

Organism:

Saccharomyces cerevisiae

Type:

Genome variation profiling by array

Platform:

GPL15778

6 Samples

Download data: FTR

(Submitter supplied) Transcriptome profiling of yeast strains responding to 0.7M NaCl treatment for 30 or 60 minutes. This study identified affected genes under both conditions tested. Transcript and protein changes were compared to determine mRNAs contribution to protein levels during salt acclimation.

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array

Platform:

GPL15778

2 Samples

Download data: FTR

(Submitter supplied) BY4741 (S288c haploid) cells have different gene expression in response to 0.4mM H2O2 when pretreated with 0.7M NaCl compared to cells that are not pretreated with NaCl (mock cells). Cells lacking Nup42p do not exhibit a different gene expression in response to H2O2 between naive cells and cells pretreated with 0.7M NaCl

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array

Platforms:

GPL15778 GPL5915

43 Samples

Download data: FTR, GPR

(Submitter supplied) designname=2006-10-12_Ansari_tiling_51mer designid=4770 51mer oligos Protocol: Standard NimbleGen synthesis procedures

Organism:

Saccharomyces cerevisiae

6 Series

1 Related Platform

36 Samples

Download data: NDF, NGD

(Submitter supplied) Standard NimbleGen synthesis procedures.

Organism:

Saccharomyces cerevisiae

10 Series

2 Related Platforms

68 Samples

Download data: NDF, TXT