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Items: 11

1.

Expression in Intergenic Regions

(Submitter supplied) Contains a row for each intergenic region in each sample, indicating whether our analysis called a window within the region "present" or "absent" in the sample. Intergenic regions are regions containing neither annotated genes nor intergenic clusters. Region coordinates refer to version 3 of the TIGR annotation as submitted to GenBank (GI numbers 22330780, 22326553, 22331929, 22329272, 22328163). Keywords: other
Organism:
Arabidopsis thaliana
Type:
Expression profiling by genome tiling array
16 related Platforms
72 Samples
Download data
Series
Accession:
GSE639
ID:
200000639

PubMed Similar studies Analyze with GEO2R

2.

Expression of Intergenic Clusters

(Submitter supplied) Contains a row for each intergenic cluster in each sample, indicating whether our analysis called the cluster "present" or "absent" in the sample. Intergenic clusters are novel (unannotated) genes detected by aligning Arabidopsis cDNAs/ESTs to the genome. Cluster coordinates refer to version 3 of the TIGR annotation as submitted to GenBank (GI numbers 22330780, 22326553, 22331929, 22329272, 22328163). more...
Organism:
Arabidopsis thaliana
Type:
Expression profiling by genome tiling array
16 related Platforms
72 Samples
Download data
Series
Accession:
GSE638
ID:
200000638

PubMed Similar studies Analyze with GEO2R

3.

Antisense Expression of Annotated Genes

(Submitter supplied) Contains a row for each annotated gene in each sample, indicating whether our analysis called the region antisense to the coding region of the gene "present" or "absent" in the sample. Gene names and coordinates refer to version 3 of the TIGR annotation as submitted to GenBank (GI numbers 22330780, 22326553, 22331929, 22329272, 22328163). Keywords: other
Organism:
Arabidopsis thaliana
Type:
Expression profiling by genome tiling array
16 related Platforms
72 Samples
Download data
Series
Accession:
GSE637
ID:
200000637

PubMed Similar studies Analyze with GEO2R

4.

Expression of Annotated Genes

(Submitter supplied) Contains a row for each annotated gene in each sample, indicating whether our analysis called the gene "present" or "absent" in the sample. Gene names and coordinates refer to version 3 of the TIGR annotation as submitted to GenBank (GI numbers 22330780, 22326553, 22331929, 22329272, 22328163). Keywords: other
Organism:
Arabidopsis thaliana
Type:
Expression profiling by genome tiling array
16 related Platforms
72 Samples
Download data
Series
Accession:
GSE636
ID:
200000636

PubMed Similar studies Analyze with GEO2R

5.

Identification of new full length Arabidopsis genes - whole genome arrays

(Submitter supplied) Identification of new and unpredicted full length Arabidopsis genes. Examination of cRNA prepared from Arabidopsis thaliana ecotype Columbia light grown 7-day old seedlings using whole genome tiling arrays. Keywords: other
Organism:
Arabidopsis thaliana
Type:
Expression profiling by genome tiling array
12 related Platforms
12 Samples
Download data
Series
Accession:
GSE605
ID:
200000605

PubMed Similar studies Analyze with GEO2R

6.

Identification of new and unpredicted full length Arabidopsis genes

(Submitter supplied) Examination of cRNA from Arabidopsis flowers, roots and suspension cell culture using custom high-density Affymetrix genome tiling arrays in order to identify new and unpredicted genes. Keywords: other
Organism:
Arabidopsis thaliana
Type:
Expression profiling by genome tiling array
16 related Platforms
48 Samples
Download data
Series
Accession:
GSE601
ID:
200000601

PubMed Similar studies Analyze with GEO2R

7.

Arabidopsis Whole Genome Tiling Array 1-rc-2

(Submitter supplied) This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was used to make these chips and the position coordinates in the table refer to this version of the sequence. Six chips were required to tile one strand of the genome. This chip tiles the opposite strand of the sequence of Chromosome 1 (GenBank accession # NC_003070.2 GI:18426880) from base 19,658,476 to base 30,080,809 (end) and Chromosome 2 (GenBank accession # NC_003071.1 GI:15224037) from base 1 to base 9,108,425. more...
Organism:
Arabidopsis thaliana
6 Series
4 Samples
Download data
Platform
Accession:
GPL439
ID:
100000439

8.

whole-genome 1-rc-2 L+

Organism:
Arabidopsis thaliana
Source name:
Ecotype Columbia, Light grown 7-day old seedlings
Platform:
GPL439
Series:
GSE605 GSE636 GSE637 GSE638 GSE639
Download data
Sample
Accession:
GSM9212
ID:
300009212

9.

SC 1-RC-2

Organism:
Arabidopsis thaliana
Source name:
Arabidopsis suspension cell culture
Platform:
GPL439
Series:
GSE601 GSE636 GSE637 GSE638 GSE639
Download data
Sample
Accession:
GSM8965
ID:
300008965

10.

RT 1-RC-2

Organism:
Arabidopsis thaliana
Source name:
Arabidopsis roots
Platform:
GPL439
Series:
GSE601 GSE636 GSE637 GSE638 GSE639
Download data
Sample
Accession:
GSM8964
ID:
300008964

11.

FL 1-RC-2

Organism:
Arabidopsis thaliana
Source name:
Arabidopsis flowers
Platform:
GPL439
Series:
GSE601 GSE636 GSE637 GSE638 GSE639
Download data
Sample
Accession:
GSM8963
ID:
300008963

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