GSE208561[Accession] - GEO DataSets - NCBI

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Select item 2002085611.

Patterns of heterochromatin distribution alterations linked to transcriptional changes at Plasmodium falciparum clonally variant gene loci

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Plasmodium falciparum

Type:: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL21078 GPL26985
43 Samples

Download data: BEDGRAPH, NARROWPEAK, TXT

Series

Accession:: GSE208561

ID:: 200208561

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000269852.

Agilent-085763 Pfalciparum15KArray_Sept18

(Submitter supplied) Based on designs 037237 (Llinas lab) and 084561 (Cortes lab), with some new probes added by Cortes lab. Arrays of this design have barcodes that begin with 16085763 or 2585763. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. more...

Organism:: Plasmodium falciparum

6 Series
84 Samples

Platform

Accession:: GPL26985

ID:: 100026985

Select item 1000210783.

Illumina HiSeq 2500 (Plasmodium falciparum)

Organism:: Plasmodium falciparum

31 Series
365 Samples

Platform

Accession:: GPL21078

ID:: 100021078

Select item 3063378604.

B11, timepoint 43-48 hpi

Organism:: Plasmodium falciparum

Source name:: B11_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337860

ID:: 306337860

Select item 3063378595.

B11, timepoint 40-45 hpi

Organism:: Plasmodium falciparum

Source name:: B11_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337859

ID:: 306337859

Select item 3063378586.

B11, timepoint 37-42 hpi

Organism:: Plasmodium falciparum

Source name:: B11_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337858

ID:: 306337858

Select item 3063378577.

B11, timepoint 30-35 hpi

Organism:: Plasmodium falciparum

Source name:: B11_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337857

ID:: 306337857

Select item 3063378568.

B11, timepoint 20-25 hpi

Organism:: Plasmodium falciparum

Source name:: B11_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337856

ID:: 306337856

Select item 3063378559.

B11, timepoint 10-15 hpi

Organism:: Plasmodium falciparum

Source name:: B11_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337855

ID:: 306337855

Select item 30633785410.

E5, timepoint 43-48 hpi

Organism:: Plasmodium falciparum

Source name:: E5_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337854

ID:: 306337854

Select item 30633785311.

E5, timepoint 40-45 hpi

Organism:: Plasmodium falciparum

Source name:: E5_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337853

ID:: 306337853

Select item 30633785212.

E5, timepoint 37-42 hpi

Organism:: Plasmodium falciparum

Source name:: E5_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337852

ID:: 306337852

Select item 30633785113.

E5, timepoint 30-35 hpi

Organism:: Plasmodium falciparum

Source name:: E5_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337851

ID:: 306337851

Select item 30633785014.

E5, timepoint 20-25 hpi

Organism:: Plasmodium falciparum

Source name:: E5_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337850

ID:: 306337850

Select item 30633784915.

E5, timepoint 10-15 hpi

Organism:: Plasmodium falciparum

Source name:: E5_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337849

ID:: 306337849

Select item 30633784816.

A7, timepoint 43-48 hpi

Organism:: Plasmodium falciparum

Source name:: A7_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337848

ID:: 306337848

Select item 30633784717.

A7, timepoint 40-45 hpi

Organism:: Plasmodium falciparum

Source name:: A7_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337847

ID:: 306337847

Select item 30633784618.

A7, timepoint 37-42 hpi

Organism:: Plasmodium falciparum

Source name:: A7_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337846

ID:: 306337846

Select item 30633784519.

A7, timepoint 30-35 hpi

Organism:: Plasmodium falciparum

Source name:: A7_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337845

ID:: 306337845

Select item 30633784420.

A7, timepoint 20-25 hpi

Organism:: Plasmodium falciparum

Source name:: A7_subclone (channel 1) 3D7-A and 3D7-B mixed stage Reference Pool (channel 2)

Platform:: GPL26985
Series:: GSE208131 GSE208561

Download data: TXT

Sample

Accession:: GSM6337844

ID:: 306337844

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