GSE37074[Accession] - GEO DataSets - NCBI

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Select item 2000370741.

DNaseI Hypersensitivity by Digital DNaseI from ENCODE/University of Washington

(Submitter supplied) This track is produced as part of the mouse ENCODE Project. This track shows DNaseI sensitivity measured genome-wide in mouse tissues and cell lines using the Digital DNaseI methodology (see below), and DNaseI hypersensitive sites. DNaseI has long been used to map general chromatin accessibility and DNaseI hypersensitivity is a universal feature of active cis-regulatory sequences. The use of this method has led to the discovery of functional regulatory elements that include enhancers, insulators, promotors, locus control regions and novel elements. more...

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL9185
53 Samples

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Series

Accession:: GSE37074

ID:: 200037074

Mouse ENCODE SRA Run Selector

Select item 1000091852.

Illumina Genome Analyzer (Mus musculus)

Organism:: Mus musculus

554 Series
3778 Samples

Platform

Accession:: GPL9185

ID:: 100009185

Select item 3010142003.

UW_DnaseSeq_TReg-Activated_adult-8wks_C57BL/6

Organism:: Mus musculus

Source name:: TReg-Activated

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014200

ID:: 301014200

SRA Run Selector

Select item 3010141994.

UW_DnaseSeq_Fibroblast_adult-8wks_C57BL/6

Organism:: Mus musculus

Source name:: Fibroblast

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014199

ID:: 301014199

SRA Run Selector

Select item 3010141985.

UW_DnaseSeq_Retina_adult-1wks_C57BL/6

Organism:: Mus musculus

Source name:: Retina

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014198

ID:: 301014198

SRA Run Selector

Select item 3010141976.

UW_DnaseSeq_WholeBrain_E14.5_C57BL/6

Organism:: Mus musculus

Source name:: WholeBrain

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014197

ID:: 301014197

SRA Run Selector

Select item 3010141967.

UW_DnaseSeq_3134_immortalized_RIII

Organism:: Mus musculus

Source name:: 3134

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014196

ID:: 301014196

SRA Run Selector

Select item 3010141958.

UW_DnaseSeq_Liver_adult-8wks_C57BL/6

Organism:: Mus musculus

Source name:: Liver

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014195

ID:: 301014195

SRA Run Selector

Select item 3010141949.

UW_DnaseSeq_Lung_adult-8wks_C57BL/6

Organism:: Mus musculus

Source name:: Lung

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014194

ID:: 301014194

SRA Run Selector

Select item 30101419310.

UW_DnaseSeq_Kidney_adult-8wks_C57BL/6

Organism:: Mus musculus

Source name:: Kidney

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014193

ID:: 301014193

SRA Run Selector

Select item 30101419211.

UW_DnaseSeq_T-Naive_adult-8wks_C57BL/6

Organism:: Mus musculus

Source name:: T-Naive

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014192

ID:: 301014192

SRA Run Selector

Select item 30101419112.

UW_DnaseSeq_MEL_immortalized_Unknown

Organism:: Mus musculus

Source name:: MEL

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51334 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014191

ID:: 301014191

SRA Run Selector

Select item 30101419013.

UW_DnaseSeq_B-cell_(CD19+)_adult-8wks_C57BL/6

Organism:: Mus musculus

Source name:: B-cell_(CD19+)

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014190

ID:: 301014190

SRA Run Selector

Select item 30101418914.

UW_DnaseSeq_SkMuscle_adult-8wks_C57BL/6

Organism:: Mus musculus

Source name:: SkMuscle

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014189

ID:: 301014189

SRA Run Selector

Select item 30101418815.

UW_DnaseSeq_Retina_newborn-1days_C57BL/6

Organism:: Mus musculus

Source name:: Retina

Platform:: GPL9185
Series:: GSE37074 GSE49847

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014188

ID:: 301014188

SRA Run Selector

Select item 30101418716.

UW_DnaseSeq_ES-CJ7_E0_129S1/SVImJ

Organism:: Mus musculus

Source name:: ES-CJ7

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51334 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014187

ID:: 301014187

SRA Run Selector

Select item 30101418617.

UW_DnaseSeq_LgIntestine_adult-8wks_C57BL/6

Organism:: Mus musculus

Source name:: LgIntestine

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014186

ID:: 301014186

SRA Run Selector

Select item 30101418518.

UW_DnaseSeq_Thymus_adult-8wks_C57BL/6

Organism:: Mus musculus

Source name:: Thymus

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014185

ID:: 301014185

SRA Run Selector

Select item 30101418419.

UW_DnaseSeq_WholeBrain_E18.5_C57BL/6

Organism:: Mus musculus

Source name:: WholeBrain

Platform:: GPL9185
Series:: GSE37074 GSE49847

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014184

ID:: 301014184

SRA Run Selector

Select item 30101418320.

UW_DnaseSeq_Liver_E14.5_C57BL/6

Organism:: Mus musculus

Source name:: Liver

Platform:: GPL9185
Series:: GSE37074 GSE49847 GSE51336

Download data: BIGWIG, BROADPEAK, NARROWPEAK

Sample

Accession:: GSM1014183

ID:: 301014183

SRA Run Selector

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