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Items: 19

1.

Affymetrix SNP copy number data for embryonic stem cell samples

(Submitter supplied) Human pluripotent stem cell (hPSC) lines exhibit repeated patterns of genetic variation, which can alter in vitro properties as well as suitability for clinical use. We examined associations between copy number variations (CNVs) on chromosome 17 and hPSC mesodiencephalic dopaminergic (mDA) differentiation.
Organism:
Homo sapiens
Type:
Genome variation profiling by SNP array; SNP genotyping by SNP array
Platform:
GPL6801
17 Samples
Download data: CEL, CNCHP, CNVCHP, TXT
Series
Accession:
GSE64241
ID:
200064241
2.

[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 (ucsc=hg18; ncbi=NCBI36) August 01, 2012: annotation table updated with netaffx build 32 (ucsc=hg19; ncbi=GRCh37) Protocol: see manufacturer's web site The new Affymetrix® Genome-Wide Human SNP Array 6.0 features 1.8 million genetic markers, including more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation. more...
Organism:
Homo sapiens
404 Series
22859 Samples
Download data
Platform
Accession:
GPL6801
ID:
100006801
3.

stem cell line ESO4P65

Organism:
Homo sapiens
Source name:
stem cell line ESO4P65
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566886
ID:
301566886
4.

stem cell line ESO2P47

Organism:
Homo sapiens
Source name:
stem cell line ESO2P47
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566885
ID:
301566885
5.

stem cell line BG01V2_LATEC

Organism:
Homo sapiens
Source name:
stem cell line BG01V2_LATEC
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566884
ID:
301566884
6.

stem cell line BG01V2_LATEB

Organism:
Homo sapiens
Source name:
stem cell line BG01V2_LATEB
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566883
ID:
301566883
7.

stem cell line BG01V2_LATEA

Organism:
Homo sapiens
Source name:
stem cell line BG01V2_LATEA
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566882
ID:
301566882
8.

stem cell line BG01V2_EARLYC

Organism:
Homo sapiens
Source name:
stem cell line BG01V2_EARLYC
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566881
ID:
301566881
9.

stem cell line BG01V2_EARLYB

Organism:
Homo sapiens
Source name:
stem cell line BG01V2_EARLYB
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566880
ID:
301566880
10.

stem cell line BG01V2_EARLYA

Organism:
Homo sapiens
Source name:
stem cell line BG01V2_EARLYA
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566879
ID:
301566879
11.

stem cell line BG03C

Organism:
Homo sapiens
Source name:
stem cell line BG03C
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566878
ID:
301566878
12.

stem cell line BG03B

Organism:
Homo sapiens
Source name:
stem cell line BG03B
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566877
ID:
301566877
13.

stem cell line BG03A

Organism:
Homo sapiens
Source name:
stem cell line BG03A
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566876
ID:
301566876
14.

stem cell line BG02C

Organism:
Homo sapiens
Source name:
stem cell line BG02C
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566875
ID:
301566875
15.

stem cell line BG02B

Organism:
Homo sapiens
Source name:
stem cell line BG02B
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566874
ID:
301566874
16.

stem cell line BG02A

Organism:
Homo sapiens
Source name:
stem cell line BG02A
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566873
ID:
301566873
17.

stem cell line BG01C

Organism:
Homo sapiens
Source name:
stem cell line BG01C
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566872
ID:
301566872
18.

stem cell line BG01B

Organism:
Homo sapiens
Source name:
stem cell line BG01B
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566871
ID:
301566871
19.

stem cell line BG01A

Organism:
Homo sapiens
Source name:
stem cell line BG01A
Platform:
GPL6801
Series:
GSE64241
Download data: CEL, CNCHP, CNVCHP
Sample
Accession:
GSM1566870
ID:
301566870
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