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Items: 4

1.

Identification of herpes simplex virus 1 and host targets of miR-138 by combined RNAseq/PARCLIP

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens; Mus musculus; Human alphaherpesvirus 1
Type:
Expression profiling by high throughput sequencing; Other
5 related Platforms
36 Samples
Download data: TXT
Series
Accession:
GSE127504
ID:
200127504
2.

Identification of targets of miR-138 in Neuro-2a and 293T cells by RNAseq

(Submitter supplied) We previously showed that miR-138 can repress herpes simplex virus 1 (HSV-1) ICP0 expression by binding to ICP0 mRNA. However, in this study we found that miR-138 can also repress viral gene expression independent of ICP0. We did not find other confirmed viral targets of miR-138. Therefore we conducted these RNAseq experiments (in combination with PAR-CLIP experiments whose results are uploaded separately) to identify host targets of miR-138 in two cell lines to explain the ICP0-independent effects on HSV-1 gene expression.
Organism:
Homo sapiens; Mus musculus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL19057 GPL18573
12 Samples
Download data: TXT
Series
Accession:
GSE127502
ID:
200127502
3.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
4.

miR-138_293T2

Organism:
Homo sapiens
Source name:
293T cells
Platform:
GPL18573
Series:
GSE127502 GSE127504
Download data: TXT
Sample
Accession:
GSM3635616
ID:
303635616
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