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Items: 4

1.

Epigenetic and transcriptional consequences of chemically induced transposon mobilization in the endosperm (CUT&Tag)

(Submitter supplied) Genomic imprinting, an epigenetic phenomenon leading to parent-of-origin-specific gene expression, has independently evolved in the endosperm of flowering plants and the placenta of mammals—tissues crucial for nurturing embryos. While transposable elements (TEs) frequently colocalize with imprinted genes and are implicated in imprinting establishment, direct investigations of the impact of de novo TE transposition on genomic imprinting remain scarce. more...
Organism:
Arabidopsis thaliana
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL34120
24 Samples
Download data: BW
Series
Accession:
GSE260818
ID:
200260818
2.

Epigenetic and transcriptional consequences in the endosperm of chemically induced transposon mobilization in Arabidopsis

(Submitter supplied) Genomic imprinting, an epigenetic phenomenon leading to parent-of-origin-specific gene expression, has independently evolved in the endosperm of flowering plants and the placenta of mammals-tissues crucial for nurturing embryos. While transposable elements (TEs) frequently colocalize with imprinted genes and are implicated in imprinting establishment, direct investigations of the impact of de novo TE transposition on genomic imprinting remain scarce. more...
Organism:
Arabidopsis thaliana
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platforms:
GPL17639 GPL34120 GPL26208
40 Samples
Download data: TXT
Series
Accession:
GSE260822
ID:
200260822
3.

NextSeq 1000 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
2 Series
24 Samples
Download data
Platform
Accession:
GPL34120
ID:
100034120
4.

at-endosperm-H3_replicate1_ler_x_col_Cm

Organism:
Arabidopsis thaliana
Source name:
endosperm
Platform:
GPL34120
Series:
GSE260818 GSE260822
Download data
Sample
Accession:
GSM8125036
ID:
308125036
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Supplemental Content

db=gds|term=GSM8125036[Accession]|query=1|qty=2|blobid=MCID_673927e0c6023e543c258552|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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