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Links from GEO DataSets

Items: 12

1.

Comparative transcriptomic profiling of peripheral blood mononuclear cells (PBMNCs) isolated from pigs exposed to a high-fat diet (H-F) or to a high-fat diet plus resveratrol (H-F+RES)

(Submitter supplied) We used Affymetrix microarrays to investigate gene expression changes in PBMNCs isolated from female and male pigs to determine significant modulatory effects that may have been induced by the intake of resveratrol during 9 months in high-fat fed animals .
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL3533
22 Samples
Download data: CEL
Series
Accession:
GSE23503
ID:
200023503
2.

Comparative transcriptomic profiling of peripheral blood mononuclear cells (PBMNCs) isolated from pigs exposed to an atherogenic diet (AD) or to an AD supplemented with Grape Extract (GE) and/or Resveratrol (RES).

(Submitter supplied) We used Affymetrix microarrays to investigate gene expression changes in PBMNCs isolated from female and male pigs to determine significant modulatory effects that may have been induced by the intake of GE and (or) RES during 4 months in animals fed an atherogenic diet (AD) .
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL3533
24 Samples
Download data: CEL
Series
Accession:
GSE30874
ID:
200030874
3.

Comparative transcriptomic profiling of peripheral blood mononuclear cells (PBMCs) isolated from patients in secondary prevention of CVD taking placebo, grape extract or resveratrol-enriched grape extract

(Submitter supplied) We used Affymetrix microarrays to investigate gene expression changes in PBMCs isolated from male patients ongoing secondary prevention of CVD to determine significant modulatory effects that may have been induced by the intake of an initial dose of 8 mg of resveratrol-enriched grape extract for 6 months and then, 16 mg for a further 6 months.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL6244
54 Samples
Download data: CEL
Series
Accession:
GSE36930
ID:
200036930
4.

Expression data from Bama minipig hearts - high-fat, high-sucrose diet

(Submitter supplied) In order to study the heart disorder that the long term, high energy diet caused, Bama miniature pigs were fed a high-fat, high-sucrose diet for 23 months. These pigs developed symptoms of metabolic syndrome and showed cardiac steatosis and hypertrophy with a greatly increased heart weight (1.82-fold, P<0.05) and heart volume (1.60-fold, P<0.05) compared with the control pigs. To understand the molecular mechanisms of cardiac steatosis and hypertrophy, nine pig heart cRNA samples were hybridized to porcine GeneChips.
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL3533
9 Samples
Download data: CEL, CHP, TXT
Series
Accession:
GSE67890
ID:
200067890
5.

Testosterone deficiency induces changes of the transcriptomes of visceral adipose tissue in miniature pigs fed a high-fat and high-cholesterol diet

(Submitter supplied) Testosterone deficiency causes fat deposit, particularly in the visceral region, and its replacement might reverse fat accumulation, but the underlying mechanisms of such processes are largely unclear. To gain insights into the genome-wide role of testosterone on visceral adipose tissue (VAT), RNA-Seq was used to investigate testosterone deficiency induced changes of VAT in miniature pigs fed a high-fat and high-cholesterol (HFC) diet among intact male pigs (IM), castrated male pigs (CM), and castrated male pigs with testosterone replacement (CMT) treatments. more...
Organism:
Sus scrofa
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21332
3 Samples
Download data: TXT
Series
Accession:
GSE77544
ID:
200077544
6.

Identification of coordinately regulated microRNA-gene networks that differ in baboons discordant for LDL-Cholesterol

(Submitter supplied) Although the mechanisms underlying development of atherosclerosis are not well understood, LDL-C is known to influence expression of endothelial microRNAs (miRNAs) and gene-targets of miRNAs to promote cell senescence. However, the impact of LDL-C on expression of PBMC miRNAs and miRNA targeted genes in response to an atherogenic diet is not known. We hypothesized that miRNA expression profiles differ between baboons with low and high serum low-density lipoprotein cholesterol (LDL-C) concentrations in response to diet, and that microRNA-gene networks in baboons discordant for LDL-Cholesterol We generated small RNA libraries from baboons differing in their LDL-C response to dietary fat and cholesterol (low LDL-C, n = 3; high LDL-C, n = 3) using liver biopsies collected before and after a high-cholesterol, high-fat (HCHF) challenge diet. more...
Organism:
Papio hamadryas
Type:
Expression profiling by high throughput sequencing
Platform:
GPL25014
12 Samples
Download data: XLSX
Series
Accession:
GSE114722
ID:
200114722
7.

Human in vivo nutrigenomic effect of olive oil

(Submitter supplied) Olive oil is protective against risk factors for cardiovascular and cancer diseases. A nutrigenomic approach was performed to assess whether olive oil, the main fat of the Mediterranean diet modifies the gene expression in human peripheral blood mononuclear cells. Six healthy male volunteers ingested, at fasting state, 50 ml of olive oil, and continued with the same olive oil as a source of raw fat (25ml/day) during 3 weeks. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Dataset:
GDS3691
Platform:
GPL6511
9 Samples
Download data: TXT
Series
Accession:
GSE10590
ID:
200010590
8.

ABI Human Genome Survey Microarray Version 1

(Submitter supplied) see manufacturer's web site https://products.appliedbiosystems.com/ab/en/US/adirect/ab;jsessionid=HyNBrYvlwy6ncF1Kn3KVLSLwlbXWyxZLRyZJthLvtFdht7vG2L2T!161467451?cmd=catProductDetail&productID=4359030&catID=602388&backButton=true
Organism:
Homo sapiens
1 DataSet
1 Series
9 Samples
Download data
Platform
Accession:
GPL6511
ID:
100006511
9.
Full record GDS3691

Sustained olive oil consumption effect on peripheral blood mononuclear cells

Analysis of PBMCs from healthy males after 3 weeks of virgin olive oil (VOO) consumption at doses common in the Mediterranean diet. The Mediterranean diet protects against cardiovascular diseases. Results provide insight into the molecular mechanisms underlying the beneficial action of VOO.
Organism:
Homo sapiens
Type:
Expression profiling by array, count, 2 protocol, 3 time sets
Platform:
GPL6511
Series:
GSE10590
9 Samples
Download data: TXT
DataSet
Accession:
GDS3691
ID:
3691
10.

Cocoa polyphenols and fiber modify colonic gene expression in rats

(Submitter supplied) Cocoa intake has been associated with health benefits, improving cardiovascular function and metabolism, as well as modulating intestinal immune function. The aim of this study was to take an in-depth look into the mechanisms affected by the cocoa intake by evaluating the colonic gene expression after nutritional intervention, and to ascertain the role of the fiber of cocoa in these effects. To achieve this, Wistar rats were fed for 3-weeks with either a reference diet, a diet containing 10% cocoa (C10), a diet based on cocoa fiber (CF) or a diet containing inulin (I). more...
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platform:
GPL14797
8 Samples
Download data: TXT
Series
Accession:
GSE70950
ID:
200070950
11.

Colon Transcriptome is Modified by a Dietary Pattern/Atorvastatin Interaction in the Ossabaw Pig

(Submitter supplied) Overall diet quality and statin therapy are important modulators of inflammation and CAD progression, yet their effects on colon is not well understood. Our objective was to examine the effects and interaction of dietary patterns and statin therapy on colonic mucosa gene expression in the Ossabaw pig.
Organism:
Sus scrofa
Type:
Expression profiling by high throughput sequencing
Platform:
GPL20983
29 Samples
Download data: CSV
Series
Accession:
GSE163159
ID:
200163159
12.

The gene expression pattern of mice fed the resveratrol-enriched rice DJ526 was very different from mice fed either resveratrol or Dongjin rice alone

(Submitter supplied) The gene expression profiling analyses by DNA chip showed that the gene expression pattern of mice fed resveratrol-enriched rice DJ526 was very different from mice fed either resveratrol or Dongjin rice alone, respectively, modifying expression of genes related to aging regulation, cell differentiation, extracellular matrix, neurogenesis, or secretion.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL11202
12 Samples
Download data: TXT
Series
Accession:
GSE79109
ID:
200079109
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