Similar studies for GEO DataSets (Select 200031344) - GEO DataSets

Warning: The NCBI web site requires JavaScript to function. more...

Links from GEO DataSets

Items: 20

Select item 2000313441.

smRNA sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator

(Submitter supplied) Deep sequencing of smRNA from queen and virgin queen of two Ants: Camponotus floridanus and Harpegnathos saltator

Organism:: Camponotus floridanus; Harpegnathos saltator

Type:: Non-coding RNA profiling by high throughput sequencing

Platforms:: GPL14138 GPL14137
4 Samples

Download data: FA

Series

Accession:: GSE31344

ID:: 200031344

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000315772.

Genome-wide analysis of global and caste-specific DNA methylation in two ant species: Camponotus floridanus and Harpegnathos saltator

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Harpegnathos saltator; Camponotus floridanus

Type:: Methylation profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Expression profiling by high throughput sequencing

4 related Platforms
47 Samples

Download data: BEDGRAPH, FA

Series

Accession:: GSE31577

ID:: 200031577

PubMed Full text in PMC Similar studies

Select item 2000315763.

Single base resolution methylome of two ants: Camponotus floridanus and Harpegnathos saltator

(Submitter supplied) Deep BS-Seq of two Ants: Camponotus floridanus and Harpegnathos saltator.

Organism:: Harpegnathos saltator; Camponotus floridanus

Type:: Methylation profiling by high throughput sequencing

4 related Platforms
39 Samples

Download data: TXT

Series

Accession:: GSE31576

ID:: 200031576

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000313464.

Transcriptome sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator

(Submitter supplied) Deep sequencing of mRNA from queen and virgin queen of two Ants: Camponotus floridanus and Harpegnathos saltator

Organism:: Camponotus floridanus; Harpegnathos saltator

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL14137 GPL14138
4 Samples

Download data: BEDGRAPH

Series

Accession:: GSE31346

ID:: 200031346

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000226805.

High-throughput sequencing analyses of two ants: Camponotus floridanus and Harpegnathos saltator

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Harpegnathos saltator; Camponotus floridanus

Type:: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing

Platforms:: GPL10645 GPL10644
20 Samples

Download data: BEDGRAPH, FA

Series

Accession:: GSE22680

ID:: 200022680

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000226796.

Small RNA sequencing and analysis of two ants: Camponotus floridanus and Harpegnathos saltator

(Submitter supplied) Deep sequencing of small RNA from two Ants: Camponotus floridanus and Harpegnathos saltator

Organism:: Harpegnathos saltator; Camponotus floridanus

Type:: Non-coding RNA profiling by high throughput sequencing

Platforms:: GPL10645 GPL10644
10 Samples

Download data: FA

Series

Accession:: GSE22679

ID:: 200022679

PubMed Full text in PMC Similar studies

Select item 2000226787.

Transcriptome sequencing and analysis of two ants: Camponotus floridanus and Harpegnathos saltator

(Submitter supplied) Deep sequencing of mRNA from two Ants: Camponotus floridanus and Harpegnathos saltator

Organism:: Harpegnathos saltator; Camponotus floridanus

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL10645 GPL10644
10 Samples

Download data: BEDGRAPH

Series

Accession:: GSE22678

ID:: 200022678

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001128438.

RNA-seq from Harpegnathos tissues and brain regions

(Submitter supplied) Transcriptome sequencing of Harpegnathos ovary, fat body, antenna, non-visual brain, optic lobe, and retina

Organism:: Harpegnathos saltator

Type:: Expression profiling by high throughput sequencing

Platform:: GPL22089
18 Samples

Download data: RPKM

Series

Accession:: GSE112843

ID:: 200112843

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001026059.

RNA-seq from Camponotus and Harpegnathos ants for genome annotation

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Harpegnathos saltator; Camponotus floridanus

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL22089 GPL20286
47 Samples

Download data

Series

Accession:: GSE102605

ID:: 200102605

PubMed Full text in PMC Similar studies

Select item 20010260410.

Whole body RNA-seq from developmental stages of Harpegnathos ants

(Submitter supplied) RNA from Harpegnathos embryos, instar 1 larvae, instar 4 larvae, early pupae, late pupae, adult workers, and males was sequenced to look for gene expression changes throughout development.

Organism:: Harpegnathos saltator

Type:: Expression profiling by high throughput sequencing

Platform:: GPL22089
14 Samples

Download data: RPKM

Series

Accession:: GSE102604

ID:: 200102604

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20010260311.

Whole body RNA-seq from developmental stages of Camponotus ants

(Submitter supplied) RNA from Camponotus embryos, instar 1 larvae, instar 4 larvae, early pupae, late pupae (minor and major), adult workers, and males was sequenced to look for gene expression changes throughout development.

Organism:: Camponotus floridanus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL20286
15 Samples

Download data: RPKM

Series

Accession:: GSE102603

ID:: 200102603

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20003752312.

A chromatin link to caste identity in the carpenter ant Camponotus floridanus

(Submitter supplied) The goal of this study was to assay the extent of variation in chromatin organization between 3 ant castes (major and minor female workers and males) in one colony of Camponotus floridanus carpenter ant using ChIPseq.

Organism:: Camponotus floridanus

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL15483 GPL14137
45 Samples

Download data: GTF, TXT

Series

Accession:: GSE37523

ID:: 200037523

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20005099013.

Intronic Non-CG DNA Hydroxymethylation and Alternative mRNA Splicing in Honey Bees

(Submitter supplied) Honey bee non-CG DNA hydroxymethylation is enriched in the introns, which supplements previous findings that honey bee CG DNA methylation is enriched in exons.

Organism:: Apis mellifera scutellata; Apis mellifera

Type:: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing

Platforms:: GPL9909 GPL17742
8 Samples

Download data: BED, TXT, VCF

Series

Accession:: GSE50990

ID:: 200050990

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20006955314.

Epigenetic (re)programming of caste-specific behavior in the ant Camponotus floridanus

(Submitter supplied) Comparison of transcriptome and histone acetylation in Camponotus floridanus minor scout brains following 45 day treatment with small molecule pharmacologicals. The goal of this study was to characterize the molecular changes in gene expression and histone modification caused by ad lib feeding small molecule HAT and HDAC inhibitors

Organism:: Camponotus floridanus

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL14137 GPL20286
64 Samples

Download data: TXT, WIG

Series

Accession:: GSE69553

ID:: 200069553

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20009913015.

Brain RNA-seq one day after knockdown of the corazonin receptor in Harpegnathos ants

(Submitter supplied) This experiment aimed at determining the immediate (d1) transcriptional consequences of knockding down the corazonin receptor in the ant brain.

Organism:: Harpegnathos saltator

Type:: Expression profiling by high throughput sequencing

Platform:: GPL22089
36 Samples

Download data: TXT

Series

Accession:: GSE99130

ID:: 200099130

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20008380716.

Caste-specific gene expression in ants

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Monomorium pharaonis; Camponotus floridanus; Harpegnathos saltator

Type:: Expression profiling by high throughput sequencing

4 related Platforms
152 Samples

Download data

Series

Accession:: GSE83807

ID:: 200083807

PubMed Full text in PMC Similar studies

Select item 20008380617.

Brain RNA-seq one day intra-head injection of corazonin or control peptide in Harpegnathos ants.

(Submitter supplied) This experiment aimed at determining the immediate (d1) transcriptional consequences of corazonin in the brain.

Organism:: Harpegnathos saltator

Type:: Expression profiling by high throughput sequencing

Platform:: GPL22089
23 Samples

Download data: TXT, XLSX

Series

Accession:: GSE83806

ID:: 200083806

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20008380418.

Brain RNA-seq during the worker-gamergate transitions in Harpegnathos ants

(Submitter supplied) Harpegnathos workers were induced to transition to reproductive gamergates and mRNA from their brains was sequenced to determine changes in gene expression at different time points (0, 6, 13, and 110 days after transition onset)

Organism:: Harpegnathos saltator

Type:: Expression profiling by high throughput sequencing

Platform:: GPL14138
20 Samples

Download data: TXT

Series

Accession:: GSE83804

ID:: 200083804

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20008380319.

RNA-seq in heads from Monomorium pharaonis nurses and foragers

(Submitter supplied) Replicate pools of heads from 10 individual Monomorium pharaonis workers, collected in the act of nursing larvae or foraging for food, each from a separate replicate colony

Organism:: Monomorium pharaonis

Type:: Expression profiling by high throughput sequencing

Platform:: GPL22090
23 Samples

Download data: TXT

Series

Accession:: GSE83803

ID:: 200083803

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20008379920.

Whole-body RNA-seq from Camponotus floridanus workers and queen

(Submitter supplied) RNA-seq from whole bodies of workers (major and minor) and queen from C. floridanus to increase replicate number from 2010 genome study