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Links from GEO DataSets

Items: 20

1.

Differentially expressed genes after miRNA or siRNA transfection in human cancer cell lines (SK-MES, MDA-MB-231, MKN and 786-O)

(Submitter supplied) To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines (lung cancer, breast cancer, gastric cancer and renal cancer) were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
8 Samples
Download data: TXT
Series
Accession:
GSE113066
ID:
200113066
2.

Differentially expressed genes after miRNA or siRNA transfection in human cancer cell lines (II)

(Submitter supplied) To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines (bladder cancer, prostate cancer, renal cell carcinoma, oral squamous cell carcinoma and lung squamous cell carcinoma) were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL16699
32 Samples
Download data: TXT
Series
Accession:
GSE66498
ID:
200066498
3.

Differentially expressed genes after miRNA or siRNA transfection in human cancer cell lines (A-498, 786-O, A549, TE-8, PANC-1, SW1990, PC3 and PC3M)

(Submitter supplied) To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines ( renal cell carcinoma, lung adenocarcinoma, esophageal, pancreatic and prostate cancer) were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
16 Samples
Download data: TXT
Series
Accession:
GSE93290
ID:
200093290
4.

miRNA sequence analysis of drug-resistant small cell lung cancer

(Submitter supplied) We obtained small cell lung cancer specimens and normal lung specimens from patients who died of drug-resistant SCLC. The small lung cancer specimens include primary lesions and metastatic lesions. Next generation sequencing was performed to assess the expression of miRNA in drug-resistant small cell lung cancer.
Organism:
Homo sapiens
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL16791
12 Samples
Download data: TXT
Series
Accession:
GSE176198
ID:
200176198
5.

Differentially expressed genes after miRNA or siRNA transfection in human cancer cell lines (III)

(Submitter supplied) To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines (pancreatic cancer, esophageal cancer, tongue squamous cell carcinoma, hypopharyngeal squamous cell carcinoma and lung squamous cell carcinoma) were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
16 Samples
Download data: TXT
Series
Accession:
GSE82108
ID:
200082108
6.

Differentially expressed genes after miRNA or siRNA transfection in human cancer cell lines II

(Submitter supplied) To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines (pancreatic cancer, esophageal cancer, bladder cancer, prostate cancer, renal cell carcinoma and lung squamous cell carcinoma) were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
32 Samples
Download data: TXT, XLSX
Series
Accession:
GSE77790
ID:
200077790
7.

Differentially expressed genes in human brest cancer specimens

(Submitter supplied) To identify differentially expressed genes in human brest cancer specimens were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
4 Samples
Download data: TXT
Series
Accession:
GSE118539
ID:
200118539
8.

Differentially expressed genes in HNSCC tissues, normal oral epithelial tissues and CAFs

(Submitter supplied) To identify differentially expressed genes by HNSCC tissues, normal oral epithelial tissues and CAFs were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL21185
8 Samples
Download data: TXT, XLSX
Series
Accession:
GSE172120
ID:
200172120
9.

Differentially expressed genes in head and neck cancer cell line (Sa3), control Sa3 and miR-30e-3p transfected Sa3

(Submitter supplied) Differentially expressed genes in head and neck cancer cell line (Sa3), control Sa3 and miR-30e-3p transfected Sa3
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL21185
1 Sample
Download data: TXT, XLSX
Series
Accession:
GSE189290
ID:
200189290
10.

microRNA expression changes after knocking out MYEOV in two human pancreatic cancer cell lines

(Submitter supplied) Pancreatic cancer (PC) remains a highly lethal malignancy worldwide. As metastasis and malignant proliferation are primarily responsible for poor clinical outcomes of PC, it is imminent to dig out the pivotal gene involved in the process as well as its underlying molecular mechanism. In this study, through analysis of TCGA and GTEx data, we found that the expression level of MYEOV was obviously increased in carcinoma tissues relative to healthy ones and associated with poor survival in PC patients. more...
Organism:
Homo sapiens
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL11154
12 Samples
Download data: TXT
Series
Accession:
GSE143828
ID:
200143828
11.

Identification of miR-29a-mediated target transcriptome in human pancreatic stellate cells (hPSCs) using RNAseq approach

(Submitter supplied) In this study, we aim to understand the role of miR-29a in in regulating hPSCs. Identification of the differentially expressed direct and indirect miR-29a targets and the associated pathways from the RNASeq data delineates gene interactions and networks essential for activated PSCs in pancreatic ductal adenocarcinoma (PDAC) in regulating desmoplasia and tumor-stomal crosstalk, which are crucial mechanisms for PDAC progression.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL20301
6 Samples
Download data: XLSX
12.

Differentially expressed genes after miRNA or siRNA transfection in human cancer cell lines IV

(Submitter supplied) To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines (pancreatic cancer, esophageal cancer and lung squamous cell carcinoma) were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
8 Samples
Download data: TXT
Series
Accession:
GSE107008
ID:
200107008
13.

Differentially expressed genes after miRNA or siRNA transfection in human cancer cell lines (T24, BOY, A549 and SK-MES)

(Submitter supplied) To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines (pancreatic cancer, esophageal cancer and lung squamous cell carcinoma) were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
8 Samples
Download data: TXT
Series
Accession:
GSE123318
ID:
200123318
14.

microRNA modulated networks of adaptive and innate immune response in pancreatic ductal adenocarcinoma

(Submitter supplied) Despite progress in treatment strategies, only ~24% of pancreatic ductal adenocarcinoma (PDAC) patients survive >1 year. Our goal was to elucidate deregulated pathways modulated by microRNAs (miRNAs) in PDAC and Vater ampulla (AMP) cancers.
Organism:
synthetic construct; Homo sapiens
Type:
Non-coding RNA profiling by array
Platform:
GPL19117
28 Samples
Download data: CEL, CHP
Series
Accession:
GSE125179
ID:
200125179
15.

microRNA expression signature of colorectal cancer

(Submitter supplied) To elucidate novel aspects of the molecular pathogenesis of colorectal cancer (CRC), we have created a new microRNA (miRNA) expression signature based on RNA-sequencing. Analysis of the signature showed that 84 miRNAs were upregulated and 70 were downregulated in CRC tissues. Interestingly, our signature indicated that both guide and passenger strands of some miRNAs were significantly dysregulated in CRC tissues. more...
Organism:
Homo sapiens
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL16791
10 Samples
Download data: TXT
Series
Accession:
GSE183437
ID:
200183437
16.

Differentially expressed genes after siRNA transfection in human cancer cell lines II

(Submitter supplied) To identify differentially expressed genes by anti cancer treatments (miRNA and siRNAs) in human cancer, several cell lines (breast cancer, colorectal cancer and renal cancer) were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
8 Samples
Download data: TXT
Series
Accession:
GSE129043
ID:
200129043
17.

Gene expression profiling of pancreatic epithelial cells in response to tissue contextual changes

(Submitter supplied) To understand the molecular process associated with tissue morphogenesis of pancreatic epithelial cells, we profiled the transcriptomes of normal or malignant pancreatic organoids formed in three-dimenstional reconsitututed basement membrance (rBM). Cell monolayers cultured on rBM-coated culture plastics were used as controls.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL570
12 Samples
Download data: CEL, CHP
Series
Accession:
GSE42270
ID:
200042270
18.

Analyses of mIRNA transcript level following exposure to triptolide

(Submitter supplied) Analyses of mirna transcript levels following exposure to the drug triptolide in vitro and prodrug minnelide in xenograft pancreatic tumor mouse models.
Organism:
Homo sapiens
Type:
Non-coding RNA profiling by array
Platform:
GPL8179
42 Samples
Download data: TXT
Series
Accession:
GSE46188
ID:
200046188
19.

Differentially expressed genes after miRNA or siRNA transfection in multiple human cancer cell lines

(Submitter supplied) To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines ( pancreatic cancer, renal cell carcinoma, oral squamous cell carcinoma, prostate cancer and bladder cancer) were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
16 Samples
Download data: TXT
Series
Accession:
GSE106791
ID:
200106791
20.

Differentially expressed genes after miRNA or siRNA transfection in human cancer cell lines Panc-1, FaDu and PC3

(Submitter supplied) To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines (pancreatic cancer, hypopharyngeal squamous cell carcinoma and prostate cancer) were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
8 Samples
Download data: TXT
Series
Accession:
GSE85614
ID:
200085614
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