Similar studies for GEO DataSets (Select 3504) - GEO DataSets

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Items: 11

Select item 35041.

Dendritic cell response to 2,3,7,8-tetrachlorodibenzo-p-dioxin-induced aryl hydrocarbon receptor activation

Analysis of MACS-sorted splenic dendritic cells (DC) from aryl hydrocarbon receptor (AHR) +/+, C57BL6 females after 24hr in vivo treatment with TCDD. The TCDD ligand is an AHR agonist and a potent immunotoxicant. Results provide insight into the consequences of TCDD-induced AHR activation in DCs.

Organism:: Mus musculus

Type:: Expression profiling by array, transformed count, 2 agent sets

Platform:: GPL339
Series:: GSE13719
4 Samples

Download data: CEL

DataSet

Accession:: GDS3504

ID:: 3504

Select item 2000137202.

AHR mediated gene expression changes in immature DN thymocytes and thymic emigrants

(Submitter supplied) Effect of an immunosupressive dose of TCDD, a ligand for the aryl hydrocarbon receptor, on the gene expression profile of fetal DN thymocytes and thymic emigrants

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL339
6 Samples

Download data: CEL

Series

Accession:: GSE13720

ID:: 200013720

Select item 2000137193.

TCDD induced gene expression changes in dendritic cells

(Submitter supplied) Effect of the over activation of the aryl hydrocarbon receptor on gene expression of spleen derived dendritic cells.

Organism:: Mus musculus

Type:: Expression profiling by array

Dataset:: GDS3504
Platform:: GPL339
4 Samples

Download data: CEL

Series

Accession:: GSE13719

ID:: 200013719

Select item 2000100934.

Effect of TCDD Exposure on purified splenic CD8 T cells

(Submitter supplied) 8-12 week, female C57BL/6 mice were injected with 10 µg/kg TCDD or solvent control. CD8+ T cells from spleen were FACS purified and submitted to transcription profiling Keywords: TCDD, AHR, Immunosupression peripheral T cells, CD8 T cells, Toxicogenomics

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL339
4 Samples

Download data: CEL

Series

Accession:: GSE10093

ID:: 200010093

Select item 2000100845.

Effect of an AhR-/- on transcription in CD4 T cells from the spleen.

(Submitter supplied) CD4+ T cells from 8-12 week female mice were isolated from wt and AhR-/- mice 24h after injection of 10µg/kg TCDD or solvent control. Keywords: TCDD, AHR, immunosuppression

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL339
8 Samples

Download data: CEL

Series

Accession:: GSE10084

ID:: 200010084

Select item 2000100826.

Aryl Hydrocarbon Receptor Regulates Distinct Dioxin-Dependent and Dioxin-Independent Gene Batteries

(Submitter supplied) Conventional biochemical and molecular techniques identified previously several genes whose expression is regulated by the aryl hydrocarbon receptor (AHR). We sought to map the complete spectrum of AHR-dependent genes in male adult liver using expression arrays to contrast mRNA profiles in Ahr-null mice (Ahr–/–) with those in mice with wild-type AHR (Ahr+/+). Transcript profiles were determined both in untreated mice and in mice treated 19 h earlier with 1000 µg/kg 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). more...

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL1261
17 Samples

Download data: CEL, DAT, EXP

Series

Accession:: GSE10082

ID:: 200010082

Select item 2001438947.

RNA-sequencing of CD4+ T cells from mice prior to and after infection with influenza virus, and that were exposed developmentally to vehicle or TCDD

(Submitter supplied) We used next generation RNAsequencing to identify how developmental exposure to TCDD alters gene expression in CD4+ T cells. Specifically, mice were developmentally exposed to vehicle or TCDD. At adulthood, CD4+ T cells were purified from peripheral lymph nodes of naive animals or the mediastinal lymph nodes of influenza A virus (IAV) infected mice (9 days post infection). RNA was isolated from these cells, and RNA-seq was performed. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL17021
12 Samples

Download data: TXT

Series

Accession:: GSE143894

ID:: 200143894

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001438938.

Whole Genome Bisulfite Sequencing of CD4+ T cells from mice developmentally exposed to vehicle or TCDD prior to and during influenza infection

(Submitter supplied) We used Whole Genome Bisulfite Sequencing (WGBS) to compare DNA methylation patterns across the genome of CD4+ T cells. Specifically, mice were developmentally exposed to vehicle or TCDD. At adulthood, CD4+ T cells were purified from peripheral lymph nodes of naive animals or the mediastinal lymph nodes of influenza A virus (IAV) infected mice (9 days post infection). DNA was isolated from these cells, and WGBS was performed. more...

Organism:: Mus musculus

Type:: Methylation profiling by high throughput sequencing

Platform:: GPL17021
12 Samples

Download data: TXT

Series

Accession:: GSE143893

ID:: 200143893

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000101669.

Role of AhR in thymocyte emigration in vivo

(Submitter supplied) Over-activation of the aryl hydrocarbon receptor by TCDD in mice leads among other phenotypes to a severe thymic atrophy accompanied by immunosuppression. TCDD causes a block in thymocyte maturation and a preferential emigration of immature CD4-CD8- DN thymocytes (recent thymic emigrants) into the periphery. As part of this study gene expression profiles from DN thymocytes and thymic emigrants were generated from TCDD and solvent control mice Keywords: Affymetrix, TCDD, CD4-CD8- thymocytes, Thymus involution, thymic emigration, Ahr

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL339
8 Samples

Download data: CEL

Series

Accession:: GSE10166

ID:: 200010166

Select item 20013717110.

Ahr-Foxp3-RORγt Axis Controls Gut Homing of CD4+ T Cells by Regulating GPR15

(Submitter supplied) The orphan chemoattractant receptor GPR15 is important for homing T lymphocytes to the large intestine, thereby maintaining intestinal immune homeostasis. However, the molecular mechanisms underlying the regulation of GPR15 expression remain elusive. Here we show a central role of the aryl hydrocarbon receptor (Ahr) in promoting GPR15 expression both in mice and human, thus gut homing of T lymphocytes. more...

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL21103
8 Samples

Download data: BEDGRAPH

Series

Accession:: GSE137171

ID:: 200137171

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20019807811.

The Aryl Hydrocarbon Receptor Regulates Th17/Th22 Effector Functions and HIV Replication/Outgrowth in Human CD4+ T-cells

(Submitter supplied) Aryl Hydrocarbon Receptor Regulates Th17/Th22 Effector Functions and HIV Replication/Outgrowth in Human CD4+ T-cells. 6 patients (HIV + ART) Memory CD4+ T-cells and 2 conditions (DMSO andCH223191).