txid60296[Organism] - GEO DataSets

(Submitter supplied) We evaluate the global chromatin changes that occur during the developmental progression and development-to-diapause transition in a closely related set of killifish species.

Organism:: Nothobranchius furzeri; Austrofundulus limnaeus; Iconisemion striatum; Aphyosemion australe

Type:: Genome binding/occupancy profiling by high throughput sequencing

4 related Platforms
30 Samples

Download data: TXT

Series

Accession:: GSE185816

ID:: 200185816

PubMed Similar studies SRA Run Selector

Select item 2001858153.

Comparative RNAseq Between Killifish Species

(Submitter supplied) We evaluate the global gene expression changes that occur during a stage-matched developmental window in a closely related set of killifish species.

Organism:: Aphyosemion australe; Nothobranchius furzeri; Iconisemion striatum

Type:: Expression profiling by high throughput sequencing

4 related Platforms
145 Samples

Download data: CSV

Series

Accession:: GSE185815

ID:: 200185815

PubMed Similar studies SRA Run Selector

Select item 2000812314.

Sequencing of smallRNAs of fish embryos in somite stage

(Submitter supplied) Sequencing of smallRNA of different Nothobranchius furzeri (Nfu) strains and 8 further anual and not anual fish species for investigation of its differential expression with and without diapause.

Organism:: Rivulus cylindraceus; Nematolebias papilliferus; Iconisemion striatum; Nothobranchius furzeri; Epiplatys dageti monroviae; Aplocheilus lineatus; Callopanchax occidentalis; Austrofundulus leohoignei

Type:: Non-coding RNA profiling by high throughput sequencing

10 related Platforms
18 Samples

Download data: XLS

Series

Accession:: GSE81231

ID:: 200081231

SRA Run Selector

Select item 2001043215.

small RNA-seq of three tissues (brain, liver, skin) of Nothobranchius furzeri (at different ages) and Brain samples of 6 other killifish species

(Submitter supplied) The RNA-seq data contain 3 tissues (brain, liver, skin) of N. furzeri strains MZM-0410 and GRZ plus 2 biological replicates of brain of 6 other killifish species. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

Organism:: Iconisemion striatum; Nothobranchius furzeri; Nothobranchius pienaari; Nothobranchius kuhntae; Nothobranchius korthausae; Nothobranchius kadleci; Nothobranchius rachovii

Type:: Non-coding RNA profiling by high throughput sequencing

7 related Platforms
162 Samples

Download data: TXT

Series

Accession:: GSE104321

ID:: 200104321

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000928546.

small RNA-seq of three tissues (brain, liver, skin) of Nothobranchius furzeri (at different ages), embryonic samples of N. furzeri and 6 other killifish species

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Nothobranchius kadleci; Nothobranchius pienaari; Nothobranchius korthausae; Iconisemion striatum; Nothobranchius furzeri; Nothobranchius kuhntae; Nothobranchius rachovii