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1532 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		BEDGRAPH
GSE216689	Mitochondria- and polyribosome-interacting lncRNA sequencing analysis in human embryonic stem cells, iPSCs and fibroblasts	Expression profiling by high throughput sequencing	Homo sapiens	9	ZIP XLSX GTF BEDGRAPH	Ji-Fan Hu	Jun 16, 2023
GSE228822	Potent and uniform fetal hemoglobin induction via base editing	Expression profiling by high throughput sequencing Other	Homo sapiens	39	YAML TXT TAR BW BEDGRAPH	Jonanthan Yen	Apr 28, 2023
GSE56648	Human nuclear Dicer restricts the deleterious accumulation of endogenous double strand RNA	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	XLSX TXT BEDGRAPH SRA Run Selector	Kinga Kamieniarz-Gdula	Apr 10, 2014
GSE60006	Genome-wide maps of HES1 binding-site in human chondrogenic cell.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	XLSX BEDGRAPH BED SRA Run Selector	Shurei Sugita	Aug 02, 2014
GSE60988	Tracking distinct RNA populations using efficient and reversible covalent chemistry	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	24	XLSX BEDGRAPH SRA Run Selector	Erin Elizabeth Duffy	Sep 03, 2015
GSE68890	MBNL Sequestration by Toxic RNAs and RNA Mis-Processing in the Myotonic Dystrophy Brain	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	39	XLSX TXT BEDGRAPH SRA Run Selector	Maurice Swanson	Jul 30, 2015
GSE76091	Diverse fates of uracilated HIV DNA during infection of myeloid lineage cells	Other	Homo sapiens	2	XLSX VCF BEDGRAPH SRA Run Selector	Jay R. Hesselberth	Jan 19, 2016
GSE84157	Major MLL fusion partners regulate promoter-proximal pausing and release of RNA polymerase II	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	49	XLSX XLS TXT BEDGRAPH SRA Run Selector	Gang Wei	Jun 30, 2021
GSE84432	Analysis of active enhancers and direct androgen receptor target genes in VCaP prostate cancer cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	20	XLSX BEDGRAPH BED SRA Run Selector	Sari Toropainen	Oct 06, 2016
GSE86791	RNA binding protein CPEB1 remodels host and viral RNA landscapes [RNA-Seq]	Expression profiling by high throughput sequencing Other	Homo sapiens	9	XLSX BEDGRAPH SRA Run Selector	Gene Yeo	Sep 17, 2016
GSE87785	Sequencing-based analyses characterize a tumor suppressive role of mir-1271 repressed by DNA hypermethylation in gastric cancer	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	19	XLSX BEDGRAPH SRA Run Selector	Jong Hwan Kim	Jun 12, 2018
GSE93845	Nuclear mTOR acts as a transcriptional integrator of the androgen signaling pathway in prostate cancer progression [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	XLSX CSV BEDGRAPH SRA Run Selector	Etienne Audet-Walsh	Jul 18, 2017
GSE93846	Nuclear mTOR acts as a transcriptional integrator of the androgen signaling pathway in prostate cancer progression	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	XLSX CSV BEDGRAPH	Etienne Audet-Walsh	Jul 18, 2017
GSE100636	Epigenetic characterization of NKG2C high cells of primigravid decidual NK, multigravid decidual NK, nulligravid endometrial NK and multigravid endometrial NK	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	XLSX TXT BIGWIG BEDGRAPH SRA Run Selector	Ofer Mandelbaum	May 25, 2018
GSE103405	OMICS assisted N-terminal proteoform and protein expression profiling upon methionine aminopeptidase 1 (MetAP1) deletion	Expression profiling by high throughput sequencing	Homo sapiens	5	XLSX BEDGRAPH SRA Run Selector	Petra Van Damme	Jan 12, 2018
GSE103408	H3K9me3 chIP-seq 5 days following disruption of the SETDB1 H3K9 trimethylase with two different sgRNAs (6, and 9) or non-targeting control	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	XLSX XLS BEDGRAPH SRA Run Selector	Trinna L. Cuellar	Sep 06, 2017
GSE113045	ONECUT2 is a putative oncogene associated with CpG hypomethylation at promoter-proximal DNA in gastric cancer and triggers ACSL5, a member of the ACS family	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	12	XLSX BEDGRAPH SRA Run Selector	Jong Hwan Kim	Feb 16, 2020
GSE119187	Tri-4C: efficient and quantitative analysis of enhancer loops at hundred base pair resolution (Tri-4C)	Other	Homo sapiens	38	XLSX BEDGRAPH SRA Run Selector	Yizhou Zhu	Aug 28, 2020
GSE119744	Enhancer profiling of chronic lymphocytic leukemia cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	36	XLSX BEDGRAPH SRA Run Selector	James Bradner	Nov 29, 2018
GSE124963	Suppression of oncogenic super enhancers in MYC-dependent AMLs by NR4A Nuclear Receptors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	XLSX BEDGRAPH SRA Run Selector	Steven Gregory Call	Jan 11, 2020