GEO Browser - GEO

Series

Samples

Platforms

DataSets

37 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Saccharum officinarum
GSE31492	miRNA expression data from low nitrate cultures in maize	Non-coding RNA profiling by array	Arabidopsis thaliana Glycine max Medicago truncatula Oryza sativa Physcomitrium patens Populus trichocarpa Saccharum officinarum Sorghum bicolor Zea mays Zea mays subsp. mays synthetic construct	21	CEL	Chuanxiao Xie	Sep 01, 2011
GSE31373	miRNA expression data from low nitrate culture in leaf and root of maize	Non-coding RNA profiling by array	Arabidopsis thaliana Glycine max Medicago truncatula Oryza sativa Physcomitrium patens Populus trichocarpa Saccharum officinarum Sorghum bicolor Zea mays	12		Chuanxiao Xie	Sep 01, 2011
GSE35606	miR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells (miRNA)	Non-coding RNA profiling by array	Anopheles gambiae Apis mellifera Arabidopsis thaliana Ateles geoffroyi Betapolyomavirus macacae Bombyx mori Bos taurus Caenorhabditis briggsae Caenorhabditis elegans Canis lupus familiaris Danio rerio Drosophila melanogaster Drosophila pseudoobscura Gallid alphaherpesvirus 2 Gallus gallus Glycine max Gorilla gorilla Homo sapiens Human betaherpesvirus 5 Human gammaherpesvirus 8 Lagothrix lagotricha Lemur catta Macaca mulatta Macaca nemestrina Macacine gammaherpesvirus 4 Medicago truncatula Monodelphis domestica Murid gammaherpesvirus 4 Mus musculus Oryza sativa Ovis aries Pan paniscus Pan troglodytes Physcomitrium patens Pongo pygmaeus Populus trichocarpa Rattus norvegicus Saccharum officinarum Saguinus labiatus Schmidtea mediterranea Sorghum bicolor Sus scrofa Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis Zea mays human gammaherpesvirus 4	4	GPR	Janet M. Young	Apr 02, 2012
GSE35921	miR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells	Expression profiling by array Non-coding RNA profiling by array	Anopheles gambiae Apis mellifera Arabidopsis thaliana Ateles geoffroyi Betapolyomavirus macacae Bombyx mori Bos taurus Caenorhabditis briggsae Caenorhabditis elegans Canis lupus familiaris Danio rerio Drosophila melanogaster Drosophila pseudoobscura Gallid alphaherpesvirus 2 Gallus gallus Glycine max Gorilla gorilla Homo sapiens Human betaherpesvirus 5 Human gammaherpesvirus 8 Lagothrix lagotricha Lemur catta Macaca mulatta Macaca nemestrina Macacine gammaherpesvirus 4 Medicago truncatula Monodelphis domestica Murid gammaherpesvirus 4 Mus musculus Oryza sativa Ovis aries Pan paniscus Pan troglodytes Physcomitrium patens Pongo pygmaeus Populus trichocarpa Rattus norvegicus Saccharum officinarum Saguinus labiatus Schmidtea mediterranea Sorghum bicolor Sus scrofa Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis Zea mays human gammaherpesvirus 4	16	GPR	Janet M. Young	Apr 02, 2012
GSE243804	aChIP: efficient, sensitive, robust ChIP-seq for economically important plant organs [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Brassica napus Citrus sinensis Dianthus caryophyllus Glycine max Oryza sativa Populus Saccharum officinarum Solanum lycopersicum Solanum tuberosum Zea mays	152	BROADPEAK NARROWPEAK	Wenying Zhong	Apr 28, 2024
GSE243806	aChIP: efficient, sensitive, robust ChIP-seq for economically important plant organs	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana Brassica napus Citrus sinensis Dianthus caryophyllus Glycine max Oryza sativa Populus Saccharum officinarum Solanum lycopersicum Solanum tuberosum Zea mays	160	BROADPEAK NARROWPEAK	Wenying Zhong	Apr 28, 2024
GSE129543	Vast differences in organ-specific rhythms of transcription in field-grown sugarcane	Expression profiling by array	Saccharum hybrid cultivar SP80-3280 Saccharum officinarum	84		Carlos T Hotta	Apr 10, 2019
GSE19768	UV-B regulation of microRNAs in maize	Non-coding RNA profiling by array	Arabidopsis thaliana Brassica napus Glycine max Gossypium hirsutum Medicago truncatula Oryza sativa Physcomitrium patens Pinus taeda Populus trichocarpa Saccharum officinarum Selaginella moellendorffii Solanum lycopersicum Sorghum bicolor Triticum aestivum Vitis vinifera Zea mays	2	TXT	Paula Casati	Oct 31, 2013
GSE5021	Transcripts associated with cell wall metabolism and development in the sugarcane stem by GeneChip expression profiling	Expression profiling by array	Saccharum hybrid cultivar Q117 Saccharum officinarum	12	CEL	Rosanne Elena Casu	Nov 19, 2006
GSE1702	The SUCAST catalogue	Expression profiling by array	Saccharum officinarum	54		Renato Vicentini	Aug 24, 2005
GSE87826	Sugarcane transcriptome: Lxx inoculated (LxxI) vs. mocked inoculated (MI) plants	Expression profiling by array	Saccharum officinarum	4		Luis Eduardo Aranha Camargo	Nov 13, 2017
GSE4967	Sugarcane transcriptome - Response to herbivory by Diatraea saccharalis	Expression profiling by array	Saccharum hybrid cultivar SP80-3280 Saccharum officinarum	8		Milton Yutaka Nishiyama Jr	May 20, 2007
GSE4970	Sugarcane transcriptome - Response to N2-fixing endophytic bacteria association	Expression profiling by array	Saccharum hybrid cultivar SP70-1143 Saccharum officinarum	8		Milton Yutaka Nishiyama Jr	May 20, 2007
GSE4966	Sugarcane transcriptome - Phosphate starvation	Expression profiling by array	Saccharum hybrid cultivar SP80-3280 Saccharum officinarum	16		Milton Yutaka Nishiyama Jr	May 20, 2007
GSE4969	Sugarcane transcriptome - MeJa treatment	Expression profiling by array	Saccharum hybrid cultivar SP80-3280 Saccharum officinarum	12		Milton Yutaka Nishiyama Jr	May 20, 2007
GSE4971	Sugarcane transcriptome - Drought response	Expression profiling by array	Saccharum hybrid cultivar SP90-1638 Saccharum officinarum	12		Milton Yutaka Nishiyama Jr	May 20, 2007
GSE4968	Sugarcane transcriptome - ABA treatment	Expression profiling by array	Saccharum hybrid cultivar SP80-3280 Saccharum officinarum	16		Milton Yutaka Nishiyama Jr	May 20, 2007
GSE14732	Sugarcane genes associated with sucrose content relate to drought and cell wall metabolism	Expression profiling by array	Saccharum hybrid cultivar (mixed) Saccharum hybrid cultivar SP80-3280 Saccharum hybrid cultivar SP90-1638 Saccharum officinarum	80	TXT	Milton Yutaka Nishiyama Jr	Feb 12, 2009
GSE125070	Sugarcane drought experiment under field conditions	Expression profiling by array	Saccharum hybrid cultivar (mixed) Saccharum officinarum	12	TXT	Augusto Lima Diniz	Jan 14, 2021
GSE33574	Sugarcane Expression Data from Stress Time Series	Expression profiling by array	Saccharum hybrid cultivar (mixed) Saccharum officinarum	6		Milton Yutaka Nishiyama Jr	Aug 01, 2012