GEO Browser - GEO

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19 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Human immunodeficiency virus 1		XLSX
GSE245526	Replication-competent HIV-1 gRNA Constructs for CRISPR/Cas9-based Discovery of Antiviral Factors	Other	Human immunodeficiency virus 1	49	TAB XLSX	Konstantin MJ Sparrer	Apr 15, 2024
GSE253747	Aging aggravates aortic aneurysm and dissection via the miR-1204-MYLK signaling axis	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Herpesvirus saimiri (strain 11) Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6B Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Macacine alphaherpesvirus 1 Merkel cell polyomavirus human gammaherpesvirus 4	12	GPR XLSX	Jingsong Ou	Apr 02, 2024
GSE213777	MiRNAs array after SH3BP2 silencing in Gastrointestinal stromal tumor cells	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Herpesvirus saimiri (strain 11) Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6B Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Macacine alphaherpesvirus 1 Merkel cell polyomavirus human gammaherpesvirus 4	12	TXT XLSX	Margarita Martin	Sep 23, 2022
GSE196698	MicroRNAs profile in Human Circulating CD4+ T Cells in Patients with Atherosclerosis Obliterans：Healthy persons vs. patients	Non-coding RNA profiling by array	Homo sapiens Human alphaherpesvirus 2 Human immunodeficiency virus 1 JC polyomavirus Lymphocryptovirus Merkel cell polyomavirus Rhadinovirus	14	GPR XLSX	Siwen Wang	Feb 15, 2022
GSE126136	A focused deep mutational scan on the Env transmembrane and proximal cytosolic regions reveals an absence of sequence features for MA association	Other	Human immunodeficiency virus 1	5	XLSX SRA Run Selector	Erik Procko	Feb 07, 2019
GSE102276	Mutational tolerance of HIV-1 Env in the CD4, VRC01 and PG16 bound states	Other	Human immunodeficiency virus 1	21	XLSX SRA Run Selector	Erik Procko	Feb 03, 2019
GSE117328	Deep mutational scanning of Env from the HIV-1 strain DU422 for binding to CD4 and PG16	Other	Human immunodeficiency virus 1	22	XLSX SRA Run Selector	Erik Procko	Feb 01, 2019
GSE104277	Control of microRNA expression by mitochondrial function	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Mus musculus Rattus norvegicus human gammaherpesvirus 4	3	TXT XLSX	Keshav Singh	Oct 19, 2017
GSE77825	miR-195-5p Regulates Hair Follicle Inductivity of Dermal Papilla Cells by Suppressing Wnt/β-catenin Activation	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus human gammaherpesvirus 4	6	GPR XLS XLSX	Yang Liu	Feb 11, 2016
GSE74209	MiRNA Profiling of Whole Trabecular Bone: Identification of Osteoporosis-Related Changes in MiRNAs in Human Hip Bones	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Herpesvirus saimiri (strain 11) Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6B Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Macacine alphaherpesvirus 1 Merkel cell polyomavirus human gammaherpesvirus 4	12	TXT XLSX	Júlia Perera-Bel	Dec 21, 2015
GSE74211	Primary Human Osteoblasts miRNA array	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Herpesvirus saimiri (strain 11) Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6B Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Macacine alphaherpesvirus 1 Merkel cell polyomavirus human gammaherpesvirus 4	4	TXT XLSX	Júlia Perera-Bel	Dec 21, 2015
GSE66932	Role of miRNA in inflammatory bowel disease	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Cytomegalovirus Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human immunodeficiency virus 1 JC polyomavirus Lymphocryptovirus Merkel cell polyomavirus Rhadinovirus	6	CSV TXT XLSX	Raju Ranjha	Nov 02, 2015
GSE70851	HIV-1 RNAs are not part of the Argonaute 2 associated RNA interference pathway in macrophages	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Human immunodeficiency virus 1	14	XLSX SRA Run Selector	Pejman Mohammadi	Jul 14, 2015
GSE65277	Autoimmune peptide antigen reactivity in normal B6 mice Pepperchip 2.0	Protein profiling by protein array	Betapolyomavirus macacae Chlamydia pneumoniae Chlamydia trachomatis Coxsackievirus A20 Coxsackievirus A9 Coxsackievirus B4 Coxsackievirus B4 (strain E2) Escherichia coli Haemophilus influenzae Helicobacter pylori Hepacivirus hominis Hepatitis C virus isolate HC-J6 Homo sapiens Human Endogenous Retrovirus IDDMK1,2-22 Human T-cell leukemia virus type I Human T-cell lymphotrophic virus type 1 (isolate MT-2) Human adenovirus 12 Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6 Human endogenous retrovirus K Human herpesvirus 4 strain B95-8 Human herpesvirus 4 type 1 Human herpesvirus 4 type 2 Human immunodeficiency virus 1 Human poliovirus 3 strain Sabin Human rotavirus MP409 Klebsiella pneumoniae Lactobacillus delbrueckii subsp. bulgaricus Mus musculus Mycobacterium avium Mycobacterium avium subsp. paratuberculosis Mycobacterium avium subsp. paratuberculosis K-10 Mycobacterium gordonae Mycobacterium tuberculosis Mycobacterium tuberculosis variant bovis Paraburkholderia fungorum Porphyromonas gingivalis Porphyromonas gingivalis W83 Prochlorococcus marinus str. MIT 9202 Proteus mirabilis Shigella flexneri Staphylococcus aureus Staphylococcus aureus A9635 Streptococcus pyogenes Torque teno virus Trypanosoma cruzi Yersinia enterocolitica human gammaherpesvirus 4	2	XLSX	Jennie Hamilton	Feb 28, 2015
GSE65278	Autoimmune peptide antigen reactivity in BXD2 mice with spontaneous systemic autoimmune disease Pepperchip 2.0	Protein profiling by protein array	Betapolyomavirus macacae Chlamydia pneumoniae Chlamydia trachomatis Coxsackievirus A20 Coxsackievirus A9 Coxsackievirus B4 Coxsackievirus B4 (strain E2) Escherichia coli Haemophilus influenzae Helicobacter pylori Hepacivirus hominis Hepatitis C virus isolate HC-J6 Homo sapiens Human Endogenous Retrovirus IDDMK1,2-22 Human T-cell leukemia virus type I Human T-cell lymphotrophic virus type 1 (isolate MT-2) Human adenovirus 12 Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6 Human endogenous retrovirus K Human herpesvirus 4 strain B95-8 Human herpesvirus 4 type 1 Human herpesvirus 4 type 2 Human immunodeficiency virus 1 Human poliovirus 3 strain Sabin Human rotavirus MP409 Klebsiella pneumoniae Lactobacillus delbrueckii subsp. bulgaricus Mus musculus Mycobacterium avium Mycobacterium avium subsp. paratuberculosis Mycobacterium avium subsp. paratuberculosis K-10 Mycobacterium gordonae Mycobacterium tuberculosis Mycobacterium tuberculosis variant bovis Paraburkholderia fungorum Porphyromonas gingivalis Porphyromonas gingivalis W83 Prochlorococcus marinus str. MIT 9202 Proteus mirabilis Shigella flexneri Staphylococcus aureus Staphylococcus aureus A9635 Streptococcus pyogenes Torque teno virus Trypanosoma cruzi Yersinia enterocolitica human gammaherpesvirus 4	2	XLSX	Jennie Hamilton	Feb 28, 2015
GSE65290	General Approach for Tetramer Based Identification of Autoantigen Reactive B Cells: Characterization of La and snRNP Reactive B Cells in Autoimmune BXD2 Mice	Protein profiling by protein array	Betapolyomavirus macacae Caprine arthritis encephalitis virus Chlamydia pneumoniae Chlamydia trachomatis Coxsackievirus A20 Coxsackievirus A9 Coxsackievirus B4 Coxsackievirus B4 (strain E2) Escherichia coli Haemophilus influenzae Helicobacter pylori Hepacivirus hominis Hepatitis C virus isolate HC-J6 Homo sapiens Human Endogenous Retrovirus IDDMK1,2-22 Human T-cell leukemia virus type I Human T-cell lymphotrophic virus type 1 (isolate MT-2) Human adenovirus 12 Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6 Human endogenous retrovirus K Human herpesvirus 4 strain B95-8 Human herpesvirus 4 type 1 Human herpesvirus 4 type 2 Human immunodeficiency virus 1 Human poliovirus 3 strain Sabin Human rotavirus MP409 Klebsiella pneumoniae Lactobacillus delbrueckii subsp. bulgaricus Mus musculus Mycobacterium avium Mycobacterium avium subsp. paratuberculosis Mycobacterium avium subsp. paratuberculosis K-10 Mycobacterium gordonae Mycobacterium tuberculosis Mycobacterium tuberculosis variant bovis Paraburkholderia fungorum Porphyromonas gingivalis Porphyromonas gingivalis W83 Prochlorococcus marinus str. MIT 9202 Proteus mirabilis Shigella flexneri Staphylococcus aureus Staphylococcus aureus A9635 Streptococcus pyogenes Torque teno virus Trypanosoma cruzi Yersinia enterocolitica human gammaherpesvirus 4	29	XLSX	Jennie Hamilton	Feb 28, 2015
GSE60839	miRCURY LNATM microRNA Array (7th Gen) profiling of monocyte-derived macrophages and monocyte-derived dendritic cells.	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Cytomegalovirus Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human immunodeficiency virus 1 JC polyomavirus Lymphocryptovirus Merkel cell polyomavirus Rhadinovirus	90	TXT XLSX	Jezrom Bokcaerin Self-Fordham	Dec 01, 2014
GSE60840	miRCURY LNATM microRNA Array (7th Gen) profiling of monocyte-derived osteoclasts and macrophages.	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Cytomegalovirus Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human immunodeficiency virus 1 JC polyomavirus Lymphocryptovirus Merkel cell polyomavirus Rhadinovirus	72	TXT XLSX	Jezrom Bokcaerin Self-Fordham	Dec 01, 2014
GSE59072	miRNA and consolidation of cued fear memory	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Mus musculus cytomegalovirus 2 Rattus norvegicus human gammaherpesvirus 4	8	XLSX	Brian George Dias	Sep 30, 2014