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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 16, 2015 |
| Title |
Illumina NextSeq 500 (Xenopus laevis) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Xenopus laevis |
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| Submission date |
Dec 16, 2015 |
| Last update date |
Jan 19, 2016 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (747)
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GSM1973500, GSM2042204, GSM2042205, GSM2042206, GSM2042207, GSM2042215
GSM2042216, GSM2042217, GSM2042218, GSM3171642, GSM3171643, GSM3171644, GSM3171645, GSM3171646, GSM3171647, GSM3171680, GSM3171681, GSM3171682, GSM3171683, GSM3171684, GSM3171685, GSM3523319, GSM3609528, GSM3609529, GSM3609530, GSM3609531, GSM3609532, GSM3609533, GSM3609534, GSM3609535, GSM3609536, GSM3609537, GSM3609538, GSM3609539, GSM3609540, GSM3609541, GSM3609542, GSM3609543, GSM3609544, GSM3609545, GSM3609546, GSM3609547, GSM3609548, GSM3609549, GSM3609550, GSM3609551, GSM3609552, GSM3609553, GSM3609554, GSM3609555, GSM3609556, GSM3832849, GSM3832850, GSM3832851, GSM3832852, GSM4013175, GSM4013176, GSM4089657, GSM4089658, GSM4089659, GSM4089660, GSM4089661, GSM4089662, GSM4089663, GSM4089664, GSM4089665, GSM4089666, GSM4089667, GSM4089668, GSM4089669, GSM4089670, GSM4089671, GSM4089672, GSM4089673, GSM4089674, GSM4089675, GSM4089676, GSM4089677, GSM4089678, GSM4089679, GSM4089680, GSM4089681, GSM4089682, GSM4089683, GSM4089684, GSM4089685, GSM4089686, GSM4089687, GSM4089688, GSM4089689, GSM4089690, GSM4089691, GSM4089692, GSM4089693, GSM4089694, GSM4089695, GSM4089696, GSM4089697, GSM4089698, GSM4089699, GSM4089700, GSM4089701, GSM4089702, GSM4089703, GSM4089704, GSM4089705, GSM4089706, GSM4089707, GSM4435518, GSM4435519, GSM4435520, GSM4435521, GSM4435522, GSM4435523, GSM4435524, GSM4435525, GSM4435526, GSM4435527, GSM4435528, GSM4435529, GSM4435530, GSM4435531, GSM4435532, GSM4435533, GSM4435534, GSM4435535, GSM4435536, GSM4435537, GSM4435538, GSM4435539, GSM4435540, GSM4435541, GSM4435542, GSM4435543, GSM4435544, GSM4435545, GSM4435546, GSM4435547, GSM4435548, GSM4435549, GSM4435550, GSM4435551, GSM4435552, GSM4435553, GSM4435554, GSM4435555, GSM4435556, GSM4435557, GSM4435558, GSM4435559, GSM4629156, GSM4629157, GSM4629158, GSM4629159, GSM4629160, GSM4658472, GSM4658473, GSM4658474, GSM4658475, GSM4658476, GSM4658477, GSM4658478, GSM4658479, GSM4658480, GSM4658481, GSM4658482, GSM4658483, GSM4658484, GSM4658485, GSM4658486, GSM4812178, GSM4812179, GSM4813824, GSM4813825, GSM4813826, GSM4879075, GSM4879076, GSM4879077, GSM4879078, GSM4879079, GSM4879080, GSM4879081, GSM4879082, GSM4879083, GSM4879084, GSM4879085, GSM4879086, GSM4879087, GSM4879088, GSM4879089, GSM4879090, GSM4879091, GSM4879092, GSM4879093, GSM4879094, GSM4879095, GSM4879096, GSM4879097, GSM4879098, GSM5182717, GSM5555985, GSM5555986, GSM5555987, GSM5555988, GSM5555989, GSM5555990, GSM5555991, GSM5555992, GSM5555993, GSM5555994, GSM5555995, GSM5555996, GSM5555997, GSM5555998, GSM5555999, GSM5556000, GSM5556001, GSM5556002, GSM5556003, GSM5556004, GSM5556005, GSM5556006, GSM5556007, GSM5556008, GSM5556009, GSM5556010, GSM5556011, GSM5556012, GSM5556013, GSM5556014, GSM5556015, GSM5556016, GSM5556017, GSM5556018, GSM5556019, GSM5556020, GSM5556021, GSM5556022, GSM5556023, GSM5556024, GSM5556025, GSM5556026, GSM5556027, GSM5556028, GSM5556029, GSM5556030, GSM5556031, GSM5556032, GSM5556033, GSM5556034, GSM5556035, GSM5556036, GSM5556037, GSM5556038, GSM5556039, GSM5556040, GSM5556041, GSM5556042, GSM5556043, GSM5556044, GSM5556045, GSM5556046, GSM5556047, GSM5556048, GSM5556049, GSM5556050, GSM5556051, GSM5556052, GSM5556053, GSM5556054, GSM5556055, GSM5556056, GSM5556057, GSM5556058, GSM5556059, GSM5556060, GSM5829477, GSM5829478, GSM5829479, GSM5829480, GSM5829481, GSM5829482, GSM5829483, GSM5829484, GSM5829485, GSM5829486, GSM5953273, GSM5953274, GSM5953275, GSM5953276, GSM5953277, GSM5953278, GSM5953279, GSM5953280, GSM5953281, GSM5953282, GSM5953283, GSM5953284, GSM5953285, GSM5953286, GSM5953287, GSM5953288, GSM5953289, GSM5953290, GSM5953291, GSM5953292, GSM5953293, GSM5953294, GSM5953295, GSM5953296, GSM5953297, GSM5953298, GSM5953299, GSM5953300, GSM5953301, GSM5953302, GSM5953303, GSM5953304, GSM5953305, GSM5953306, GSM5953307, GSM5953308, GSM5953329, GSM5953330, GSM5953331, GSM5953332, GSM5953333, GSM5953334, GSM5953335, GSM5953336, GSM5953337, GSM5953338, GSM5953339, GSM5953340, GSM5953341, GSM5953342, GSM5953343, GSM5953344, GSM5953345, GSM5953346, GSM6076888, GSM6076889, GSM6076890, GSM6076891, GSM6076892, GSM6076893, GSM6076894, GSM6076895, GSM6076896, GSM6076897, GSM6076898, GSM6076899, GSM6076900, GSM6076901, GSM6076902, GSM6076903, GSM6076904, GSM6076905, GSM6076906, GSM6076907, GSM6076908, GSM6076909, GSM6076910, GSM6076911, GSM6076912, GSM6076913, GSM6076914, GSM6076915, GSM6076916, GSM6076917, GSM6076918, GSM6076919, GSM6076920, GSM6076921, GSM6076922, GSM6076923, GSM6076924, GSM6076925, GSM6076926, GSM6076927, GSM6076928, GSM6076929, GSM6076930, GSM6076931, GSM6076932, GSM6076933, GSM6076934, GSM6076935, GSM6076936, GSM6076937, GSM6076938, GSM6076939, GSM6076940, GSM6076941, GSM6076942, GSM6076943, GSM6076944, GSM6076945, GSM6076946, GSM6076947, GSM6076948, GSM6076949, GSM6076950, GSM6076951, GSM6076952, GSM6076953, GSM6076954, GSM6076955, GSM6076956, GSM6076957, GSM6076958, GSM6076959, GSM6076960, GSM6076961, GSM6076962, GSM6076963, GSM6076964, GSM6076965, GSM6076966, GSM6076967, GSM6076968, GSM6076969, GSM6076970, GSM6076971, GSM6076972, GSM6076973, GSM6076974, GSM6076975, GSM6076976, GSM6076977, GSM6076978, GSM6076979, GSM6076980, GSM6076981, GSM6076982, GSM6076983, GSM6076984, GSM6076985, GSM6076986, GSM6076987, GSM6076988, GSM6076989, GSM6076990, GSM6076991, GSM6076992, GSM6076993, GSM6212636, GSM6212637, GSM6212638, GSM6212639, GSM6212640, GSM6212641, GSM6212642, GSM6212643, GSM6212644, GSM6212645, GSM6212646, GSM6212647, GSM6212648, GSM6212649, GSM6212650, GSM6212651, GSM6212652, GSM6212653, GSM6268519, GSM6268520, GSM6268521, GSM6268522, GSM6268523, GSM6268524, GSM6268525, GSM6268526, GSM6268527, GSM6268528, GSM6268529, GSM6268530, GSM6268531, GSM6268532, GSM6268533, GSM6268534, GSM6268535, GSM6268536, GSM6268537, GSM6268538, GSM6268539, GSM6268540, GSM6268541, GSM6268542, GSM6268543, GSM6268544, GSM6268545, GSM6268546, GSM6268547, GSM6268548, GSM6268549, GSM6268550, GSM6268551, GSM6268552, GSM6268559, GSM6268560...
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| Series (45)
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| GSE76059 |
ChIP-sequencing in stage 10.5 Xenopus laevis embryos |
| GSE76991 |
Differential expression analysis of Gcn5 knockdown embryos at early developmental stage 10.5 in Xenopus laevis |
| GSE76994 |
Differential expression analysis of triple knockdown of TBP and TBP-related factors (TKD) in Xenopus laevis embryos at early developmental stage 10.5 |
| GSE76995 |
Differential expression analysis of Gcn5 knockdown and triple knockdown of TBP and TBP-related factors (TKD) in Xenopus laevis embryos at early developmental stage 10.5 |
| GSE115220 |
Etv6-dependent positive and negative gene regulatory network controls vegfa expression in vivo [RNA-seq] |
| GSE115224 |
Etv6-dependent positive and negative gene regulatory network controls vegfa expression in vivo [ChIP-seq] |
| GSE115225 |
Etv6-dependent positive and negative gene regulatory network controls vegfa expression in vivo |
| GSE124168 |
Axonal precursor miRNAs hitchhike on endosomes and locally regulate the development of neural circuits |
| GSE126597 |
Bap1 loss leads to decreased expression of lineage specific commitment genes, and increased expression of pluripotency genes [RNA-seq] |
| GSE126598 |
Loss of Bap1 leads to an increased global methylation and decrease in H3K27AC enhancer marks around key lineage commitment genes in Xenopus laevis embryos [ChIP-seq] |
| GSE126599 |
Loss of Bap1 in Xenopus laevis embryos |
| GSE131962 |
Nascent transcriptome of Xenopus laevis embryos at mid-blastula transition (MBT) stages |
| GSE135502 |
Regulated local synthesis of ribosomal proteins maintains ribosome function in axons |
| GSE137844 |
Comparative Gene Expression Profiling between Xenopus Optic Nerve and Spinal Cord Injury to Identify Genes Involved in Successful Regeneration of Vertebrate CNS Axons |
| GSE147621 |
Proteomic and Transcriptomic Analysis of Neural Cell Fate in Developing Xenopus laevis Embryos and Explants |
| GSE152902 |
Optimized design of antisense oligomers for targeted rRNA depletion |
| GSE153925 |
Comprehensive expression profile reveals dynamic changes in Xenopus gene expression depending on the duration of activin A treatment. |
| GSE158849 |
Spatio-temporal mRNA tracking in the early zebrafish embryo |
| GSE160777 |
A temporally resolved transcriptome for developing “Keller” explants of the Xenopus laevis dorsal marginal zone |
| GSE169088 |
3D genomics across the tree of life reveals condensin II as a determinant of architecture type |
| GSE183350 |
Developmental and Injury-induced Changes in DNA Methylation in Regenerative versus Non-regenerative Regions of the Vertebrate (Xenopus laevis) Central Nervous System assayed by 5hmC MeDIP and by ChIP-seq for Histone Markers |
| GSE183357 |
Developmental and Injury-induced Changes in DNA Methylation in Regenerative versus Non-regenerative Regions of the Vertebrate (Xenopus laevis) Central Nervous System |
| GSE194146 |
RNA-seq Analysis of intestinal tubes from the Unfed and Fed Xenopus laevis tadpoles |
| GSE198598 |
Transcriptome sequencing of Xenopus laevis animal caps at six time points in transit from pluripotency to 4 lineages: epidermal, neural, ventral mesoderm and endoderm |
| GSE201833 |
Nascent Transcriptome of AP and VP from Xenopus laevis Embryos at 5-9 hpf (stage 7-9) |
| GSE201834 |
Nascent Transcriptome of Cycloheximide (CHX)-arrested Xenopus laevis Embryos from 5-7.5 hpf |
| GSE201835 |
Total and Nascent Transcriptome of Xenopus laevis Embryos at 5-9 hpf (stage 7-9) |
| GSE201874 |
Timing of Germ Layer Initiation Linked to Spatially Patterned Onset of Genome Activation |
| GSE205436 |
Shared features of blastula and neural crest stem cells evolved at the base of vertebrates |
| GSE207024 |
Hybridization led to a rewired pluripotency network in Xenopus laevis [ATAC-seq] |
| GSE207025 |
Hybridization led to a rewired pluripotency network in Xenopus laevis [CUT&RUN] |
| GSE207026 |
Hybridization led to a rewired pluripotency network in Xenopus laevis [RNA-seq] |
| GSE207027 |
Hybridization led to a rewired pluripotency network in the allotetraploid Xenopus laevis |
| GSE211415 |
Comparison of RNA localization during oogenesis within Acipenser ruthenus and Xenopus laevis [Xenopus laevis] |
| GSE211416 |
Comparison of RNA localization during oogenesis within Acipenser ruthenus and Xenopus laevis |
| GSE212518 |
A comparative study of cellular diversity between the Xenopus pronephric and mouse metanephric nephron |
| GSE221330 |
BET activity plays an essential role in control of stem cell attributes in Xenopus |
| GSE223829 |
A mixture of chemicals found in human amniotic fluid disrupts brain gene expression and behavior in Xenopus laevis |
| GSE224304 |
Xenopus laevis lack the critical sperm factor PLCz |
| GSE245317 |
Characterization of regeneration initiating cells during Xenopus laevis tail regeneration [bulk RNA-Seq 1] |
| GSE245318 |
Characterization of regeneration initiating cells during Xenopus laevis tail regeneration [bulk RNA-Seq 2] |
| GSE245320 |
Characterization of regeneration initiating cells during Xenopus laevis tail regeneration |
| GSE252573 |
SoxB1 transcription factors are essential for intiating and maintaining neural plate border gene expression [RNA-seq] |
| GSE252615 |
SoxB1 transcription factors are essential for intiating and maintaining neural plate border gene expression [ChIP-seq] |
| GSE252617 |
SoxB1 transcription factors are essential for intiating and maintaining neural plate border gene expression |
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| Supplementary data files not provided |
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