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Series GSE229961 Query DataSets for GSE229961
Status Public on Jul 27, 2024
Title Upstream regulator of genomic imprinting in rice is a small RNA-associated chromatin remodeler
Organism Oryza sativa
Experiment type Non-coding RNA profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 39242590
Submission date Apr 18, 2023
Last update date Oct 08, 2024
Contact name Shivaprasad Padubidri V.
E-mail(s) shivaprasad@ncbs.res.in, epigeneticsncbsindia@gmail.com, harshith200cy@gmail.com
Phone +91-80-2366-6511
Organization name National Centre for Biological Sciences - TIFR
Street address UAS-GKVK Campus
City Bangalore
ZIP/Postal code 560065
Country India
 
Platforms (1)
GPL27660 Illumina NovaSeq 6000 (Oryza sativa)
Samples (14)
GSM8121720 Endosperm, CR_ARF22_SHH1
GSM8121721 Endosperm, CR_CLSY3
GSM8121722 clsy3-kd, Endosperm
This SuperSeries is composed of the following SubSeries:
GSE229958 Upstream regulator of genomic imprinting in rice is a small RNA-associated chromatin remodeler [ncRNA-Seq]
GSE229959 Upstream regulator of genomic imprinting in rice is a small RNA-associated chromatin remodeler [RNA-seq]
GSE229960 Upstream regulator of genomic imprinting in rice is a small RNA-associated chromatin remodeler [targeted bisulfite PCR]
Relations
BioProject PRJNA956895

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE229961_RAW.tar 2.0 Gb (http)(custom) TAR (of BIGWIG, FA, TXT)
SRA Run SelectorHelp

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