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Status
Public on Jul 30, 2001
Title
ecoli_4.3
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Escherichia coli
Description
A microarray with 4896 spot features.
Submission date
Jul 30, 2001
Last update date
May 26, 2005
Organization
Stanford Microarray Database (SMD)
E-mail(s)
array@genome.stanford.edu Phone
650-498-6012
URL
http://genome-www5.stanford.edu/ Department
Stanford University, School of Medicine
Street address
300 Pasteur Drive
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Samples (46)
GSM506 , GSM507 , GSM508 , GSM509 , GSM510 , GSM511
GSM512 ,
GSM513 ,
GSM514 ,
GSM515 ,
GSM516 ,
GSM517 ,
GSM518 ,
GSM519 ,
GSM520 ,
GSM521 ,
GSM522 ,
GSM523 ,
GSM524 ,
GSM525 ,
GSM526 ,
GSM527 ,
GSM528 ,
GSM529 ,
GSM530 ,
GSM531 ,
GSM532 ,
GSM533 ,
GSM534 ,
GSM535 ,
GSM536 ,
GSM537 ,
GSM538 ,
GSM539 ,
GSM540 ,
GSM541 ,
GSM550 ,
GSM551 ,
GSM552 ,
GSM553 ,
GSM554 ,
GSM556 ,
GSM565 ,
GSM566 ,
GSM567 ,
GSM568 Series (3)
GSE7 Tryptophan metabolism response in E. coli
GSE8 Topoisomerase function in E. coli replication fork movement
GSE9 UV Exposure in Wild-Type and SOS-Deficient E. coli
Data table header descriptions ID ORF open reading frame identifier
SPOT_ID Spot identifier
GENE_SYMBOL name of the gene represented by the sequence in the spot/feature
GENE_DESC description of the gene represented by the sequence in the spot/feature
SECTOR spot sector grid coordinate
SECTORROW spot row grid coordinate
SECTORCOL spot column grid coordinate
PLATE clone plate identifier
PROW clone plate row
PCOL clone plate column
FAILED IS_CONTAMINATED
Data table ID ORF SPOT_ID GENE_SYMBOL GENE_DESC SECTOR SECTORROW SECTORCOL PLATE PROW PCOL FAILED IS_CONTAMINATED 1
GENOMIC
GENOMIC
1
1
1
1
A
1
0
U
2
GENOMIC
GENOMIC
1
1
2
1
A
5
0
U
3
GENOMIC
GENOMIC
1
1
3
1
A
9
0
U
4
GENOMIC
GENOMIC
1
1
4
1
A
13
0
U
5
GENOMIC
GENOMIC
1
1
5
1
A
17
0
U
6
GENOMIC
GENOMIC
1
1
6
1
A
21
0
U
7
EMPTY
EMPTY
1
1
7
1
E
1
0
U
8
EMPTY
EMPTY
1
1
8
1
E
5
0
U
9
EMPTY
EMPTY
1
1
9
1
E
9
0
U
10
EMPTY
EMPTY
1
1
10
1
E
13
0
U
11
EMPTY
EMPTY
1
1
11
1
E
17
0
U
12
EMPTY
EMPTY
1
1
12
1
E
21
0
U
13
EMPTY
EMPTY
1
1
13
1
I
1
0
U
14
EMPTY
EMPTY
1
1
14
1
I
5
0
U
15
EMPTY
EMPTY
1
1
15
1
I
9
0
U
16
EMPTY
EMPTY
1
1
16
1
I
13
0
U
17
EMPTY
EMPTY
1
1
17
1
I
17
0
U
18
EMPTY
EMPTY
1
1
18
1
I
21
0
U
19
EMPTY
EMPTY
1
2
1
1
M
1
0
U
20
EMPTY
EMPTY
1
2
2
1
M
5
0
U
4896 318 Kbytes .Supplementary data files not provided
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