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Platform GPL50 Query DataSets for GPL50
Status Public on Feb 12, 2002
Title intergenic_v1.0
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Saccharomyces cerevisiae
 
Description Tip Configuration: Standard 16-tip
Columns per Sector: 24
Column Spacing: 173
Row Spacing: 173
 
Submission date Feb 08, 2002
Last update date Oct 19, 2012
Organization Stanford Microarray Database (SMD)
E-mail(s) array@genome.stanford.edu
Phone 650-498-6012
URL http://genome-www5.stanford.edu/
Department Stanford University, School of Medicine
Street address 300 Pasteur Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Samples (14) GSM947, GSM948, GSM949, GSM950, GSM951, GSM952 
Series (1)
GSE19 SBF-MBF genomic distribution

Data table header descriptions
ID unique spot identifier
SPOT_ID Spot identifier
ORF spot name
GENE_NAME gene name
CHROMOSOME chromosome number
STRAND genomic DNA strand upon which gene sequence is placed
BEG_COORD beginning coordinate of gene sequence on genomic DNA
END_COORD ending coordinate of gene sequence on genomic DNA
PROCESS gene process
FUNCTION gene function
DS_GENE_1
DS_GENE_2
SECTOR sector of spot print location
SECTORROW sector row of spot print location
SECTORCOL sector column of spot print location
PLATE clone plate number
PROW clone plate row
PCOL clone plate column
FAILED
IS_CONTAMINATED

Data table
ID SPOT_ID ORF GENE_NAME CHROMOSOME STRAND BEG_COORD END_COORD PROCESS FUNCTION DS_GENE_1 DS_GENE_2 SECTOR SECTORROW SECTORCOL PLATE PROW PCOL FAILED IS_CONTAMINATED
1 GENOMIC 150 NG/UL 1 1 1 1 A 1 0 U
2 3XSSC 1 1 2 1 A 5 0 U
3 GENOMIC 50 NG/UL 1 1 3 1 A 9 0 U
4 3XSSC 1 1 4 1 A 13 0 U
5 COT1 100 NG/UL 1 1 5 1 A 17 0 U
6 HERRING SPERM 200 NG/UL 1 1 6 1 A 21 0 U
7 HERRING SPERM 50 NG/UL 1 1 7 1 E 1 0 U
8 CY5 DNA 1 1 8 1 E 5 0 U
9 EMPTY 1 1 9 1 E 9 0 U
10 EMPTY 1 1 10 1 E 13 0 U
11 EMPTY 1 1 11 1 E 17 0 U
12 EMPTY 1 1 12 1 E 21 0 U
13 EMPTY 1 1 13 1 I 1 0 U
14 EMPTY 1 1 14 1 I 5 0 U
15 EMPTY 1 1 15 1 I 9 0 U
16 EMPTY 1 1 16 1 I 13 0 U
17 EMPTY 1 1 17 1 I 17 0 U
18 EMPTY 1 1 18 1 I 21 0 U
19 EMPTY 1 1 19 1 M 1 0 U
20 EMPTY 1 1 20 1 M 5 0 U

Total number of rows: 7680

Table truncated, full table size 473 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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