Command-Line Argument Processing

Collaboration diagram for Command-Line Argument Processing:

Classes
class	CArgException
	CArgException –. More...
class	CArgHelpException
	CArgHelpException –. More...
class	CArgValue
	CArgValue –. More...
class	CArgs
	CArgs –. More...
class	CArgErrorHandler
	CArgErrorHandler –. More...
class	CArgDescriptions
	CArgDescriptions –. More...
struct	CArgDescriptions::SArgDependency
class	CArgDescriptions::CPrintUsage
class	CArgDescriptions::CPrintUsageXml
class	CCommandArgDescriptions
	CCommandArgDescriptions –. More...
class	CArgAllow
	CArgAllow –. More...
class	CArgAllow_Symbols
	CArgAllow_Symbols –. More...
class	CArgAllow_String
	CArgAllow_String –. More...
class	CArgAllow_Strings
	CArgAllow_Strings –. More...
class	CArgAllow_Int8s
	CArgAllow_Int8s –. More...
class	CArgAllow_Integers
	CArgAllow_Integers –. More...
class	CArgAllow_Doubles
	CArgAllow_Doubles –. More...
class	CArgDesc
	CArgDesc –. More...
class	CArgDependencyGroup
class	CArgAllow_Regexp
	CArgAllow_Regexp –. More...

Typedefs
typedef unsigned int	CArgValue::TFileFlags
	Bitwise OR of "EFileFlags". More...
typedef vector< string >	CArgValue::TStringArray
	Some values types can contain several value lists. More...
typedef unsigned int	CArgValue::TArgValueFlags
	Bitwise OR of "EArgValueFlags". More...
typedef set< CRef< CArgValue > >	CArgs::TArgs
	Type for arguments. More...
typedef TArgs::iterator	CArgs::TArgsI
	Type for iterator. More...
typedef TArgs::const_iterator	CArgs::TArgsCI
	Type for const iterator. More...
typedef unsigned int	CArgDescriptions::TFlags
	Bitwise OR of "EFlags". More...
typedef int	CArgDescriptions::TMiscFlags
	Bitwise OR of "EMiscFlags". More...
typedef int	CArgDescriptions::THideStdArgs
	Binary OR of "EHideStdArgs". More...
typedef set< AutoPtr< CArgDesc > >	CArgDescriptions::TArgs
	Argument descr. type. More...
typedef TArgs::iterator	CArgDescriptions::TArgsI
	Arguments iterator. More...
typedef TArgs::const_iterator	CArgDescriptions::TArgsCI
	Const arguments iterator. More...
typedef vector< string >	CArgDescriptions::TPosArgs
	Positional arg. vector. More...
typedef list< string >	CArgDescriptions::TKeyFlagArgs
	List of flag arguments. More...
typedef vector< string >	CArgDescriptions::TArgGroups
	Argument groups. More...
typedef multimap< string, SArgDependency >	CArgDescriptions::TDependencies
typedef TDependencies::const_iterator	CArgDescriptions::TDependency_CI
typedef unsigned int	CCommandArgDescriptions::TCommandArgFlags
	Bitwise OR of ECommandArgFlags. More...
typedef map< string, AutoPtr< CArgDescriptions > >	CCommandArgDescriptions::TDescriptions
typedef pair< ESymbolClass, string >	CArgAllow_Symbols::TSymClass
typedef set< string, PNocase_Conditional >	CArgAllow_Strings::TStrings
	Type of the container that contains the allowed string values. More...
typedef pair< Int8, Int8 >	CArgAllow_Int8s::TInterval
typedef pair< double, double >	CArgAllow_Doubles::TInterval

Enumerations
enum	CArgException::EErrCode {   CArgException::eInvalidArg , CArgException::eNoValue , CArgException::eExcludedValue , CArgException::eWrongCast ,   CArgException::eConvert , CArgException::eNoFile , CArgException::eConstraint , CArgException::eArgType ,   CArgException::eNoArg , CArgException::eSynopsis }
	Error types for improperly formatted arguments. More...
enum	CArgHelpException::EErrCode {   CArgHelpException::eHelp , CArgHelpException::eHelpFull , CArgHelpException::eHelpShowAll , CArgHelpException::eHelpXml ,   CArgHelpException::eHelpErr }
	Error type for help exception. More...
enum	CArgValue::EFileFlags {   CArgValue::fBinary = (1 << 1) , CArgValue::fText = 0 , CArgValue::fAppend = (1 << 2) , CArgValue::fTruncate = (1 << 12) ,   CArgValue::fNoCreate = (1 << 11) , CArgValue::fCreatePath = (1 << 8) }
enum	CArgValue::EArgValueFlags { CArgValue::fArgValue_HasDefault = (1 << 0) , CArgValue::fArgValue_FromDefault = (1 << 1) }
	Whether the argument: More...
enum	CArgDescriptions::EArgSetType { CArgDescriptions::eRegularArgs , CArgDescriptions::eCgiArgs }
	Type of CArgDescriptions For a CGI application positional arguments and flags does not make sense (this syntax cannot be expressed by CGI protocol) More...
enum	CArgDescriptions::EArgPositionalMode { CArgDescriptions::ePositionalMode_Strict , CArgDescriptions::ePositionalMode_Loose }
	Processing of positional arguments. More...
enum	CArgDescriptions::EType {   CArgDescriptions::eString = 0 , CArgDescriptions::eBoolean , CArgDescriptions::eInt8 , CArgDescriptions::eInteger ,   CArgDescriptions::eIntId , CArgDescriptions::eDouble , CArgDescriptions::eInputFile , CArgDescriptions::eOutputFile ,   CArgDescriptions::eIOFile , CArgDescriptions::eDirectory , CArgDescriptions::eDataSize , CArgDescriptions::eDateTime ,   CArgDescriptions::k_EType_Size }
	Available argument types. More...
enum	CArgDescriptions::EFlags {   CArgDescriptions::fPreOpen = (1 << 0) , CArgDescriptions::fBinary = (1 << 1) , CArgDescriptions::fAppend = (1 << 2) , CArgDescriptions::fTruncate = (1 << 12) ,   CArgDescriptions::fNoCreate = (1 << 11) , CArgDescriptions::fCreatePath = (1 << 8) , CArgDescriptions::fFileFlags = fPreOpen | fBinary | fAppend | fTruncate | fNoCreate | fCreatePath , CArgDescriptions::fAllowMultiple = (1 << 3) ,   CArgDescriptions::fIgnoreInvalidValue = (1 << 4) , CArgDescriptions::fWarnOnInvalidValue = (1 << 5) , CArgDescriptions::fOptionalSeparator = (1 << 6) , CArgDescriptions::fOptionalSeparatorAllowConflict = (1 << 9) ,   CArgDescriptions::fMandatorySeparator = (1 << 7) , CArgDescriptions::fHidden = (1 << 10) , CArgDescriptions::fConfidential = (1 << 13) }
	Additional flags, the first group is file related flags. More...
enum	CArgDescriptions::EFlagValue { CArgDescriptions::eFlagHasValueIfMissed = 0 , CArgDescriptions::eFlagHasValueIfSet = 1 }
	Define how flag presence affect CArgValue::HasValue(). More...
enum	CArgDescriptions::EConstraintNegate { CArgDescriptions::eConstraintInvert , CArgDescriptions::eConstraint }
	Flag to invert constraint logically. More...
enum	CArgDescriptions::EDependency { CArgDescriptions::eRequires , CArgDescriptions::eExcludes }
	Dependencies between arguments. More...
enum	CArgDescriptions::EMiscFlags {   CArgDescriptions::fNoUsage = 1 << 0 , CArgDescriptions::fUsageIfNoArgs = 1 << 1 , CArgDescriptions::fUsageSortArgs = 1 << 2 , CArgDescriptions::fDupErrToCerr = 1 << 3 ,   CArgDescriptions::fMisc_Default = 0 }
	Miscellaneous flags. More...
enum	CArgDescriptions::EHideStdArgs {   CArgDescriptions::fHideLogfile = 0x01 , CArgDescriptions::fHideConffile = 0x02 , CArgDescriptions::fHideVersion = 0x04 , CArgDescriptions::fHideFullVersion = 0x08 ,   CArgDescriptions::fHideDryRun = 0x10 , CArgDescriptions::fHideHelp = 0x20 , CArgDescriptions::fHideFullHelp = 0x40 , CArgDescriptions::fHideXmlHelp = 0x80 ,   CArgDescriptions::fHideAll = 0xFF }
	Which standard flag's descriptions should not be displayed in the usage message. More...
enum	CArgDescriptions::EPostCheckCaller { CArgDescriptions::eCreateArgs , CArgDescriptions::eConvertKeys }
enum	CCommandArgDescriptions::ECommandArgFlags { CCommandArgDescriptions::eCommandMandatory = 0 , CCommandArgDescriptions::eCommandOptional = 1 , CCommandArgDescriptions::eNoSortCommands = (1<<1) , CCommandArgDescriptions::eNoSortGroups = (1<<2) }
enum	CCommandArgDescriptions::ECommandFlags { CCommandArgDescriptions::eDefault = 0 , CCommandArgDescriptions::eHidden = 1 }
enum	CArgAllow_Symbols::ESymbolClass {   CArgAllow_Symbols::eAlnum , CArgAllow_Symbols::eAlpha , CArgAllow_Symbols::eCntrl , CArgAllow_Symbols::eDigit ,   CArgAllow_Symbols::eGraph , CArgAllow_Symbols::eLower , CArgAllow_Symbols::ePrint , CArgAllow_Symbols::ePunct ,   CArgAllow_Symbols::eSpace , CArgAllow_Symbols::eUpper , CArgAllow_Symbols::eXdigit , CArgAllow_Symbols::eUser }
	Symbol class for defining sets of characters. More...
enum	CArgDependencyGroup::EInstantSet { CArgDependencyGroup::eNoInstantSet , CArgDependencyGroup::eInstantSet }
	Control whether the "setting" of this particular member marks the whole group as "set" regardless of the value passed to SetMinMembers() More...

Functions
virtual const char *	CArgException::GetErrCodeString (void) const override
	Translate from the error code value to its string representation. More...
	CArgException::NCBI_EXCEPTION_DEFAULT (CArgException, CCoreException)
virtual const char *	CArgHelpException::GetErrCodeString (void) const override
	Translate from the error code value to its string representation. More...
	CArgHelpException::NCBI_EXCEPTION_DEFAULT (CArgHelpException, CArgException)
const string &	CArgValue::GetName (void) const
	Get argument name. More...
virtual bool	CArgValue::HasValue (void) const =0
	Check if argument holds a value. More...
	CArgValue::DECLARE_OPERATOR_BOOL (HasValue())
	Synonym for HasValue(). More...
virtual const string &	CArgValue::AsString (void) const =0
	Get the argument's string value. More...
virtual Int8	CArgValue::AsInt8 (void) const =0
	Get the argument's integer (8-byte long) value. More...
virtual int	CArgValue::AsInteger (void) const =0
	Get the argument's integer value. More...
virtual TIntId	CArgValue::AsIntId (void) const =0
	Get the argument's value as an integer id (TIntId). More...
virtual double	CArgValue::AsDouble (void) const =0
	Get the argument's double value. More...
virtual bool	CArgValue::AsBoolean (void) const =0
	Get the argument's boolean value. More...
virtual CNcbiIstream &	CArgValue::AsInputFile (TFileFlags flags=0) const =0
	Get the argument as an input file stream. More...
virtual CNcbiOstream &	CArgValue::AsOutputFile (TFileFlags flags=0) const =0
	Get the argument as an output file stream. More...
virtual CNcbiIostream &	CArgValue::AsIOFile (TFileFlags flags=0) const =0
	Get the argument as a file stream. More...
virtual const CDir &	CArgValue::AsDirectory (void) const =0
	Get the argument as a directory. More...
virtual const CTime &	CArgValue::AsDateTime (void) const =0
	Get the argument as a DateTime. More...
virtual void	CArgValue::CloseFile (void) const =0
	Close the file. More...
virtual const TStringArray &	CArgValue::GetStringList () const
	Get the value list. More...
virtual TStringArray &	CArgValue::SetStringList ()
	Get reference on value list for further modification. More...
size_t	CArgValue::GetOrdinalPosition (void) const
	Get ordinal position of the value. More...
const string &	CArgValue::GetDefault (TArgValueFlags *flags=NULL) const
	Get default value of the argument. More...
	CArgValue::CArgValue (const string &name)
	Protected constructor and destructor. More...
virtual	CArgValue::~CArgValue (void)
void	CArgValue::SetOrdinalPosition (size_t pos)
void	CArgValue::x_SetDefault (const string &def_value, bool from_def)
bool	operator< (const CRef< CArgValue > &x, const CRef< CArgValue > &y)
	CArgs::CArgs (void)
	Constructor. More...
	CArgs::~CArgs (void)
	Destructor. More...
	CArgs::CArgs (const CArgs &other)
	Creating copy of this object usually makes no sense if it is really required, please use Assign method. More...
CArgs &	CArgs::operator= (const CArgs &other)
	Creating copy of this object usually makes no sense if it is really required, please use Assign method. More...
CArgs &	CArgs::Assign (const CArgs &other)
	Copy contents of another object into this one. More...
bool	CArgs::Exist (const string &name) const
	Check existence of argument description. More...
const CArgValue &	CArgs::operator[] (const string &name) const
	Get value of argument by name. More...
size_t	CArgs::GetNExtra (void) const
	Get the number of unnamed positional (a.k.a. extra) args. More...
const CArgValue &	CArgs::operator[] (size_t idx) const
	Return N-th extra arg value, N = 1 to GetNExtra(). More...
vector< CRef< CArgValue > >	CArgs::GetAll (void) const
	Get all available arguments. More...
string &	CArgs::Print (string &str) const
	Print (append) all arguments to the string "str" and return "str". More...
void	CArgs::Add (CArgValue *arg, bool update=false, bool add_value=false)
	Add new argument name and value. More...
bool	CArgs::IsEmpty (void) const
	Check if there are no arguments in this container. More...
void	CArgs::Remove (const string &name)
	Remove argument of name "name". More...
void	CArgs::Reset (void)
	Remove all arguments. More...
string	CArgs::GetCommand (void) const
	Get current command. More...
CArgs *	CArgs::SetCommand (const string &command)
	Set current command. More...
TArgsCI	CArgs::x_Find (const string &name) const
	Find argument value with name "name". More...
TArgsI	CArgs::x_Find (const string &name)
virtual CArgValue *	CArgErrorHandler::HandleError (const CArgDesc &arg_desc, const string &value) const
	Process invalid argument value. More...
	CArgDescriptions::CArgDescriptions (bool auto_help=true, CArgErrorHandler *err_handler=0)
	Constructor. More...
virtual	CArgDescriptions::~CArgDescriptions (void)
	Destructor. More...
void	CArgDescriptions::SetArgsType (EArgSetType args_type)
	Set type of argument description (cmdline vs CGI). More...
EArgSetType	CArgDescriptions::GetArgsType () const
void	CArgDescriptions::SetPositionalMode (EArgPositionalMode positional_mode)
	Select mode for processing positional arguments. More...
EArgPositionalMode	CArgDescriptions::GetPositionalMode () const
static const char *	CArgDescriptions::GetTypeName (EType type)
	Get argument type's name. More...
void	CArgDescriptions::AddKey (const string &name, const string &synopsis, const string &comment, EType type, TFlags flags=0)
	Add description for mandatory key. More...
void	CArgDescriptions::AddOptionalKey (const string &name, const string &synopsis, const string &comment, EType type, TFlags flags=0)
	Add description for optional key without default value. More...
void	CArgDescriptions::AddDefaultKey (const string &name, const string &synopsis, const string &comment, EType type, const string &default_value, TFlags flags=0, const string &env_var=kEmptyStr, const char *display_value=nullptr)
	Add description for optional key with default value. More...
void	CArgDescriptions::AddFlag (const string &name, const string &comment, CBoolEnum< EFlagValue > set_value=eFlagHasValueIfSet, TFlags flags=0)
	Add description for flag argument. More...
void	CArgDescriptions::AddOpening (const string &name, const string &comment, EType type, TFlags flags=0)
	Add description of mandatory opening positional argument. More...
void	CArgDescriptions::AddPositional (const string &name, const string &comment, EType type, TFlags flags=0)
	Add description for mandatory positional argument. More...
void	CArgDescriptions::AddOptionalPositional (const string &name, const string &comment, EType type, TFlags flags=0)
	Add description for optional positional argument without default value. More...
void	CArgDescriptions::AddDefaultPositional (const string &name, const string &comment, EType type, const string &default_value, TFlags flags=0, const string &env_var=kEmptyStr, const char *display_value=nullptr)
	Add description for optional positional argument with default value. More...
void	CArgDescriptions::AddExtra (unsigned n_mandatory, unsigned n_optional, const string &comment, EType type, TFlags flags=0)
	Add description for the extra, unnamed positional arguments. More...
void	CArgDescriptions::AddAlias (const string &alias, const string &arg_name)
	Add argument alias. More...
void	CArgDescriptions::AddNegatedFlagAlias (const string &alias, const string &arg_name, const string &comment=kEmptyStr)
	Add negated alias for a flag argument. More...
void	CArgDescriptions::AddDependencyGroup (CArgDependencyGroup *dep_group)
	Add a dependency group. More...
void	CArgDescriptions::SetConstraint (const string &name, const CArgAllow *constraint, EConstraintNegate negate=eConstraint)
	Set additional user defined constraint on argument value. More...
void	CArgDescriptions::SetConstraint (const string &name, const CArgAllow &constraint, EConstraintNegate negate=eConstraint)
	This version of SetConstraint doesn't take the ownership of object 'constraint'. More...
void	CArgDescriptions::SetDependency (const string &arg1, EDependency dep, const string &arg2)
	Define a dependency. More...
void	CArgDescriptions::SetCurrentGroup (const string &group)
	Set current arguments group name. More...
void	CArgDescriptions::SetErrorHandler (const string &name, CArgErrorHandler *err_handler)
	Set individual error handler for the argument. More...
bool	CArgDescriptions::Exist (const string &name) const
	Check if there is already an argument description with specified name. More...
void	CArgDescriptions::Delete (const string &name)
	Delete description of argument with name "name". More...
void	CArgDescriptions::SetUsageContext (const string &usage_name, const string &usage_description, bool usage_sort_args=false, SIZE_TYPE usage_width=78)
	Set extra info to be used by PrintUsage(). More...
void	CArgDescriptions::SetDetailedDescription (const string &usage_description)
	Set detailed usage description. More...
void	CArgDescriptions::PrintUsageIfNoArgs (bool do_print=true)
	Print usage and exit. More...
void	CArgDescriptions::SetMiscFlags (TMiscFlags flags)
	Set the selected flags. More...
void	CArgDescriptions::ResetMiscFlags (TMiscFlags flags)
	Clear the selected usage flags. More...
bool	CArgDescriptions::IsSetMiscFlag (EMiscFlags flag) const
	Check if the flag is set. More...
virtual string &	CArgDescriptions::PrintUsage (string &str, bool detailed=false) const
	Print usage message to end of specified string. More...
virtual void	CArgDescriptions::PrintUsageXml (CNcbiOstream &out) const
	Print argument description in XML format. More...
static bool	CArgDescriptions::VerifyName (const string &name, bool extended=false)
	Verify if argument "name" is spelled correctly. More...
bool	CArgDescriptions::IsAutoHelpEnabled (void) const
	See if special flag "-h" is activated. More...
CArgDescriptions *	CArgDescriptions::ShowAllArguments (bool show_all)
	Include hidden arguments into USAGE. More...
virtual void	CArgDescriptions::AddStdArguments (THideStdArgs mask)
	Add standard arguments. More...
void	CArgDescriptions::AddDefaultFileArguments (const string &default_config)
	Add logfile and conffile arguments. More...
	CArgDescriptions::SArgDependency::SArgDependency (const string arg, EDependency dep)
void	CArgDescriptions::x_PrintAliasesAsXml (CNcbiOstream &out, const string &name, bool negated=false) const
TArgsI	CArgDescriptions::x_Find (const string &name, bool *negative=NULL)
	Helper method to find named parameter. More...
TArgsCI	CArgDescriptions::x_Find (const string &name, bool *negative=NULL) const
	Helper method to find named parameter – const version. More...
size_t	CArgDescriptions::x_GetGroupIndex (const string &group) const
	Get group index. More...
void	CArgDescriptions::x_AddDesc (CArgDesc &arg)
	Helper method for adding description. More...
void	CArgDescriptions::x_PreCheck (void) const
	Helper method for doing pre-processing consistency checks. More...
void	CArgDescriptions::x_PrintComment (list< string > &arr, const CArgDesc &arg, SIZE_TYPE width) const
bool	CArgDescriptions::x_CreateArg (const string &arg1, bool have_arg2, const string &arg2, unsigned *n_plain, CArgs &args) const
	Process arguments. More...
bool	CArgDescriptions::x_CreateArg (const string &arg1, const string &name, bool have_arg2, const string &arg2, unsigned int n_plain, CArgs &args, bool update=false, CArgValue **new_value=0) const
void	CArgDescriptions::x_PostCheck (CArgs &args, unsigned int n_plain, EPostCheckCaller caller) const
	Helper method for doing post-processing consistency checks. More...
bool	CArgDescriptions::x_IsMultiArg (const string &name) const
	Returns TRUE if parameter supports multiple arguments. More...
void	CArgDescriptions::x_CheckAutoHelp (const string &arg) const
	Helper method for checking if auto help requested and throw CArgHelpException if help requested. More...
	CArgDescriptions::CPrintUsage::CPrintUsage (const CArgDescriptions &desc)
	CArgDescriptions::CPrintUsage::~CPrintUsage ()
void	CArgDescriptions::CPrintUsage::AddSynopsis (list< string > &arr, const string &intro, const string &prefix) const
void	CArgDescriptions::CPrintUsage::AddDescription (list< string > &arr, bool detailed) const
void	CArgDescriptions::CPrintUsage::AddCommandDescription (list< string > &arr, const string &cmd, const map< string, string > *aliases, size_t max_cmd_len, bool detailed) const
void	CArgDescriptions::CPrintUsage::AddDetails (list< string > &arr) const
	CArgDescriptions::CPrintUsageXml::CPrintUsageXml (const CArgDescriptions &desc, CNcbiOstream &out)
	CArgDescriptions::CPrintUsageXml::~CPrintUsageXml ()
void	CArgDescriptions::CPrintUsageXml::PrintArguments (const CArgDescriptions &desc) const
template<class TSize , class TArray >
CArgs *	CArgDescriptions::CreateArgs (TSize argc, TArray argv) const
	Create parsed arguments in CArgs object. More...
virtual CArgs *	CArgDescriptions::CreateArgs (const CNcbiArguments &argv) const
	Parse command-line arguments 'argv' out of CNcbiArguments. More...
template<class T >
void	CArgDescriptions::ConvertKeys (CArgs *args, const T &arg_map, bool update) const
	Convert argument map (key-value pairs) into arguments in accordance with the argument descriptions. More...
virtual list< CArgDescriptions * >	CArgDescriptions::GetAllDescriptions (void)
	CCommandArgDescriptions::CCommandArgDescriptions (bool auto_help=true, CArgErrorHandler *err_handler=0, TCommandArgFlags cmd_flags=eCommandMandatory)
	Constructor. More...
virtual	CCommandArgDescriptions::~CCommandArgDescriptions (void)
	Destructor. More...
void	CCommandArgDescriptions::SetCurrentCommandGroup (const string &group)
	Set current command group name. More...
void	CCommandArgDescriptions::AddCommand (const string &cmd, CArgDescriptions *description, const string &alias=kEmptyStr, ECommandFlags flags=eDefault)
	Add command argument descriptions. More...
virtual CArgs *	CCommandArgDescriptions::CreateArgs (const CNcbiArguments &argv) const
	Parse command-line arguments 'argv'. More...
virtual void	CCommandArgDescriptions::AddStdArguments (THideStdArgs mask)
	Add standard arguments. More...
virtual string &	CCommandArgDescriptions::PrintUsage (string &str, bool detailed=false) const
	Print usage message to end of specified string. More...
virtual void	CCommandArgDescriptions::PrintUsageXml (CNcbiOstream &out) const
	Print argument description in XML format. More...
virtual list< CArgDescriptions * >	CCommandArgDescriptions::GetAllDescriptions (void)
void	CCommandArgDescriptions::SetArgsType (EArgSetType)
bool	CCommandArgDescriptions::x_IsCommandMandatory (void) const
size_t	CCommandArgDescriptions::x_GetCommandGroupIndex (const string &group) const
string	CCommandArgDescriptions::x_IdentifyCommand (const string &command) const
virtual bool	CArgAllow::Verify (const string &value) const =0
	Verify if specified value is allowed. More...
virtual string	CArgAllow::GetUsage (void) const =0
	Get usage information. More...
virtual void	CArgAllow::PrintUsageXml (CNcbiOstream &out) const
	Print constraints in XML format. More...
virtual	CArgAllow::~CArgAllow (void)
virtual CArgAllow *	CArgAllow::Clone (void) const
	Create object's clone, moving it from stack memory into heap. More...
	CArgAllow::CArgAllow (void)
	CArgAllow_Symbols::CArgAllow_Symbols (ESymbolClass symbol_class)
	Constructor. More...
	CArgAllow_Symbols::CArgAllow_Symbols (const string &symbol_set)
	Constructor for user defined eUser class. More...
CArgAllow_Symbols &	CArgAllow_Symbols::Allow (ESymbolClass symbol_class)
	Add allowed symbols. More...
CArgAllow_Symbols &	CArgAllow_Symbols::Allow (const string &symbol_set)
virtual bool	CArgAllow_Symbols::Verify (const string &value) const
	Verify if specified value is allowed. More...
virtual string	CArgAllow_Symbols::GetUsage (void) const
	Get usage information. More...
virtual void	CArgAllow_Symbols::PrintUsageXml (CNcbiOstream &out) const
	Print constraints in XML format. More...
	CArgAllow_Symbols::CArgAllow_Symbols (void)
virtual CArgAllow *	CArgAllow_Symbols::Clone (void) const
	Create object's clone, moving it from stack memory into heap. More...
	CArgAllow_String::CArgAllow_String (ESymbolClass symbol_class)
	Constructor. More...
	CArgAllow_String::CArgAllow_String (const string &symbol_set)
	Constructor for user defined eUser class. More...
virtual bool	CArgAllow_String::Verify (const string &value) const
	Verify if specified value is allowed. More...
virtual string	CArgAllow_String::GetUsage (void) const
	Get usage information. More...
virtual void	CArgAllow_String::PrintUsageXml (CNcbiOstream &out) const
	Print constraints in XML format. More...
	CArgAllow_String::CArgAllow_String (void)
virtual CArgAllow *	CArgAllow_String::Clone (void) const
	Create object's clone, moving it from stack memory into heap. More...
	CArgAllow_Strings::CArgAllow_Strings (NStr::ECase use_case=NStr::eCase)
	Constructor. More...
	CArgAllow_Strings::CArgAllow_Strings (initializer_list< string > values, NStr::ECase use_case=NStr::eCase)
	Constructor. More...
CArgAllow_Strings *	CArgAllow_Strings::Allow (const string &value)
	Add allowed string values. More...
CArgAllow_Strings &	CArgAllow_Strings::AllowValue (const string &value)
	Add allowed string values. More...
CArgAllow_Strings &	CArgAllow_Strings::operator, (const string &value)
	Short notation operator for adding allowed string values. More...
virtual bool	CArgAllow_Strings::Verify (const string &value) const
	Verify if specified value is allowed. More...
virtual string	CArgAllow_Strings::GetUsage (void) const
	Get usage information. More...
virtual void	CArgAllow_Strings::PrintUsageXml (CNcbiOstream &out) const
	Print constraints in XML format. More...
virtual CArgAllow *	CArgAllow_Strings::Clone (void) const
	Create object's clone, moving it from stack memory into heap. More...
	CArgAllow_Int8s::CArgAllow_Int8s (Int8 x_value)
	Constructor specifying an allowed integer value. More...
	CArgAllow_Int8s::CArgAllow_Int8s (Int8 x_min, Int8 x_max)
	Constructor specifying range of allowed integer values. More...
CArgAllow_Int8s &	CArgAllow_Int8s::AllowRange (Int8 from, Int8 to)
	Add allow values. More...
CArgAllow_Int8s &	CArgAllow_Int8s::Allow (Int8 value)
virtual bool	CArgAllow_Int8s::Verify (const string &value) const
	Verify if specified value is allowed. More...
virtual string	CArgAllow_Int8s::GetUsage (void) const
	Get usage information. More...
virtual void	CArgAllow_Int8s::PrintUsageXml (CNcbiOstream &out) const
	Print constraints in XML format. More...
	CArgAllow_Int8s::CArgAllow_Int8s (void)
virtual CArgAllow *	CArgAllow_Int8s::Clone (void) const
	Create object's clone, moving it from stack memory into heap. More...
	CArgAllow_Integers::CArgAllow_Integers (int x_value)
	Constructor specifying an allowed integer value. More...
	CArgAllow_Integers::CArgAllow_Integers (int x_min, int x_max)
	Constructor specifying range of allowed integer values. More...
virtual string	CArgAllow_Integers::GetUsage (void) const
	Get usage information. More...
	CArgAllow_Integers::CArgAllow_Integers (void)
virtual CArgAllow *	CArgAllow_Integers::Clone (void) const
	Create object's clone, moving it from stack memory into heap. More...
	CArgAllow_Doubles::CArgAllow_Doubles (double x_value)
	Constructor specifying an allowed double value. More...
	CArgAllow_Doubles::CArgAllow_Doubles (double x_min, double x_max)
	Constructor specifying range of allowed double values. More...
CArgAllow_Doubles &	CArgAllow_Doubles::AllowRange (double from, double to)
	Add allowed values. More...
CArgAllow_Doubles &	CArgAllow_Doubles::Allow (double value)
virtual bool	CArgAllow_Doubles::Verify (const string &value) const
	Verify if specified value is allowed. More...
virtual string	CArgAllow_Doubles::GetUsage (void) const
	Get usage information. More...
virtual void	CArgAllow_Doubles::PrintUsageXml (CNcbiOstream &out) const
	Print constraints in XML format. More...
	CArgAllow_Doubles::CArgAllow_Doubles (void)
virtual CArgAllow *	CArgAllow_Doubles::Clone (void) const
	Create object's clone, moving it from stack memory into heap. More...
	CArgDesc::CArgDesc (const string &name, const string &comment, CArgDescriptions::TFlags flags=0)
	Constructor. More...
virtual	CArgDesc::~CArgDesc (void)
	Destructor. More...
const string &	CArgDesc::GetName (void) const
	Get argument name. More...
const string &	CArgDesc::GetComment (void) const
	Get argument description. More...
virtual size_t	CArgDesc::GetGroup (void) const
	Get argument group. More...
virtual void	CArgDesc::SetGroup (size_t)
	Set argument group. More...
virtual string	CArgDesc::GetUsageSynopsis (bool name_only=false) const =0
	Get usage synopsis. More...
virtual string	CArgDesc::GetUsageCommentAttr (void) const =0
	Get usage comment attribute. More...
virtual CArgValue *	CArgDesc::ProcessArgument (const string &value) const =0
	Process argument with specified value. More...
virtual CArgValue *	CArgDesc::ProcessDefault (void) const =0
	Process argument default. More...
virtual void	CArgDesc::VerifyDefault (void) const
	Verify argument default value. More...
virtual void	CArgDesc::SetConstraint (const CArgAllow *constraint, CArgDescriptions::EConstraintNegate negate=CArgDescriptions::eConstraint)
	Set argument constraint. More...
virtual bool	CArgDesc::IsConstraintInverted () const
	Returns TRUE if associated constraint is inverted (NOT) More...
virtual const CArgAllow *	CArgDesc::GetConstraint (void) const
	Get argument constraint. More...
string	CArgDesc::GetUsageConstraint (void) const
	Get usage constraint. More...
virtual const CArgErrorHandler *	CArgDesc::GetErrorHandler (void) const
	Get error handler for the argument. More...
virtual void	CArgDesc::SetErrorHandler (CArgErrorHandler *)
	Set error handler for the argument. More...
CArgDescriptions::TFlags	CArgDesc::GetFlags (void) const
	Get argument flags. More...
string	CArgDesc::PrintXml (CNcbiOstream &out) const
	Print description in XML format. More...
static CRef< CArgDependencyGroup >	CArgDependencyGroup::Create (const string &name, const string &description=kEmptyStr)
	Create new dependency group. More...
virtual	CArgDependencyGroup::~CArgDependencyGroup (void)
CArgDependencyGroup &	CArgDependencyGroup::SetMinMembers (size_t min_members)
CArgDependencyGroup &	CArgDependencyGroup::SetMaxMembers (size_t max_members)
CArgDependencyGroup &	CArgDependencyGroup::Add (const string &arg_name, EInstantSet instant_set=eNoInstantSet)
	Make a regular argument a member of this dependency group. More...
CArgDependencyGroup &	CArgDependencyGroup::Add (CArgDependencyGroup *dep_group, EInstantSet instant_set=eNoInstantSet)
	Make another dependency group a member of this dependency group. More...
bool	CArgDependencyGroup::x_Evaluate (const CArgs &args, string *arg_set, string *arg_unset) const
	CArgDependencyGroup::CArgDependencyGroup (void)
	CArgDependencyGroup::CArgDependencyGroup (const CArgDependencyGroup &dep_group)
CArgDependencyGroup &	CArgDependencyGroup::operator= (const CArgDependencyGroup &)
void	CArgDependencyGroup::PrintUsage (list< string > &arr, size_t offset) const
void	CArgDependencyGroup::PrintUsageXml (CNcbiOstream &out) const
void	CArgDependencyGroup::Evaluate (const CArgs &args) const
	CArgAllow_Regexp::CArgAllow_Regexp (const string &pattern)
virtual	CArgAllow_Regexp::~CArgAllow_Regexp (void)
virtual bool	CArgAllow_Regexp::Verify (const string &value) const
virtual string	CArgAllow_Regexp::GetUsage (void) const
	Get usage information. More...
virtual void	CArgAllow_Regexp::PrintUsageXml (CNcbiOstream &out) const
	Print constraints in XML format. More...
virtual CArgAllow *	CArgAllow_Regexp::Clone (void) const
	Create object's clone, moving it from stack memory into heap. More...

Variables
string	CArgValue::m_Name
	Argument name. More...
size_t	CArgValue::m_Ordinal
string	CArgValue::m_Default
TArgValueFlags	CArgValue::m_Flags
TArgs	CArgs::m_Args
	Assoc. map of arguments' name/value. More...
size_t	CArgs::m_nExtra
	Cached # of unnamed positional arguments. More...
string	CArgs::m_Command
string	CArgDescriptions::SArgDependency::m_Arg
EDependency	CArgDescriptions::SArgDependency::m_Dep
EArgSetType	CArgDescriptions::m_ArgsType
	Type of arguments. More...
TArgs	CArgDescriptions::m_Args
	Assoc.map of arguments' name/descr. More...
TPosArgs	CArgDescriptions::m_PosArgs
	Pos. args, ordered by position in cmd.-line. More...
TPosArgs	CArgDescriptions::m_OpeningArgs
	Opening args, ordered by position in cmd.-line. More...
TKeyFlagArgs	CArgDescriptions::m_KeyFlagArgs
	Key/flag args, in order of insertion. More...
string	CArgDescriptions::m_NoSeparator
	Arguments allowed to use no separator. More...
unsigned	CArgDescriptions::m_nExtra
unsigned	CArgDescriptions::m_nExtraOpt
	> # of mandatory extra args More...
TArgGroups	CArgDescriptions::m_ArgGroups
	Argument groups. More...
size_t	CArgDescriptions::m_CurrentGroup
	Currently selected group (0 = no group) More...
EArgPositionalMode	CArgDescriptions::m_PositionalMode
	Processing of positional args. More...
TDependencies	CArgDescriptions::m_Dependencies
	Arguments' dependencies. More...
TMiscFlags	CArgDescriptions::m_MiscFlags
	Flags for USAGE, error handling etc. More...
set< CConstRef< CArgDependencyGroup > >	CArgDescriptions::m_DependencyGroups
string	CArgDescriptions::m_UsageName
	Program name. More...
string	CArgDescriptions::m_UsageDescription
	Program description. More...
string	CArgDescriptions::m_DetailedDescription
	Program long description. More...
SIZE_TYPE	CArgDescriptions::m_UsageWidth
	Maximum length of a usage line. More...
bool	CArgDescriptions::m_AutoHelp
	Special flag "-h" activated. More...
bool	CArgDescriptions::m_HasHidden
	Has hidden arguments. More...
CRef< CArgErrorHandler >	CArgDescriptions::m_ErrorHandler
	Global error handler or NULL. More...
const CArgDescriptions &	CArgDescriptions::CPrintUsage::m_desc
list< const CArgDesc * >	CArgDescriptions::CPrintUsage::m_args
const CArgDescriptions &	CArgDescriptions::CPrintUsageXml::m_desc
CNcbiOstream &	CArgDescriptions::CPrintUsageXml::m_out
TCommandArgFlags	CCommandArgDescriptions::m_Cmd_req
TDescriptions	CCommandArgDescriptions::m_Description
	command to ArgDescriptions More...
map< string, size_t >	CCommandArgDescriptions::m_Groups
	command to group # More...
map< string, string >	CCommandArgDescriptions::m_Aliases
	command to alias; one alias only More...
list< string >	CCommandArgDescriptions::m_Commands
	command names, and order More...
list< string >	CCommandArgDescriptions::m_CmdGroups
	group names, and order More...
size_t	CCommandArgDescriptions::m_CurrentCmdGroup
	current group # More...
string	CCommandArgDescriptions::m_Command
	current command More...
set< TSymClass >	CArgAllow_Symbols::m_SymClass
TStrings	CArgAllow_Strings::m_Strings
	Set of allowed string values. More...
set< TInterval >	CArgAllow_Int8s::m_MinMax
set< TInterval >	CArgAllow_Doubles::m_MinMax
string	CArgDesc::m_Name
	Argument name. More...
string	CArgDesc::m_Comment
	Argument description. More...
CArgDescriptions::TFlags	CArgDesc::m_Flags
string	CArgDependencyGroup::m_Name
string	CArgDependencyGroup::m_Description
size_t	CArgDependencyGroup::m_MinMembers
size_t	CArgDependencyGroup::m_MaxMembers
map< string, EInstantSet >	CArgDependencyGroup::m_Arguments
map< CConstRef< CArgDependencyGroup >, EInstantSet >	CArgDependencyGroup::m_Groups
const string	CArgAllow_Regexp::m_Pattern
	Regexp pattern to match against. More...
CRegexp	CArgAllow_Regexp::m_Regexp
	Pre-compiled regexp. More...

Friends
class	CArgValue::CArgs
class	CArgValue::CArgDescDefault
class	CArgValue::CArgDescMandatory
class	CArgValue::CArgDesc_Flag
class	CArgs::CCommandArgDescriptions
class	CArgDescriptions::CCommandArgDescriptions

Detailed Description

Typedef Documentation

TArgGroups

typedef vector<string> CArgDescriptions::TArgGroups

private

Argument groups.

Definition at line 1118 of file ncbiargs.hpp.

TArgs [1/2]

typedef set< CRef<CArgValue> > CArgs::TArgs

private

Type for arguments.

Definition at line 480 of file ncbiargs.hpp.

TArgs [2/2]

typedef set< AutoPtr<CArgDesc> > CArgDescriptions::TArgs

private

Argument descr. type.

Definition at line 1113 of file ncbiargs.hpp.

TArgsCI [1/2]

typedef TArgs::const_iterator CArgs::TArgsCI

private

Type for const iterator.

Definition at line 482 of file ncbiargs.hpp.

TArgsCI [2/2]

typedef TArgs::const_iterator CArgDescriptions::TArgsCI

private

Const arguments iterator.

Definition at line 1115 of file ncbiargs.hpp.

TArgsI [1/2]

typedef TArgs::iterator CArgs::TArgsI

private

Type for iterator.

Definition at line 481 of file ncbiargs.hpp.

TArgsI [2/2]

typedef TArgs::iterator CArgDescriptions::TArgsI

private

Arguments iterator.

Definition at line 1114 of file ncbiargs.hpp.

TArgValueFlags

typedef unsigned int CArgValue::TArgValueFlags

Bitwise OR of "EArgValueFlags".

Definition at line 315 of file ncbiargs.hpp.

TCommandArgFlags

typedef unsigned int CCommandArgDescriptions::TCommandArgFlags

Bitwise OR of ECommandArgFlags.

Definition at line 1390 of file ncbiargs.hpp.

TDependencies

typedef multimap<string, SArgDependency> CArgDescriptions::TDependencies

private

Definition at line 1129 of file ncbiargs.hpp.

TDependency_CI

typedef TDependencies::const_iterator CArgDescriptions::TDependency_CI

private

Definition at line 1130 of file ncbiargs.hpp.

TDescriptions

typedef map<string, AutoPtr<CArgDescriptions> > CCommandArgDescriptions::TDescriptions

private

Definition at line 1456 of file ncbiargs.hpp.

TFileFlags

typedef unsigned int CArgValue::TFileFlags

Bitwise OR of "EFileFlags".

Definition at line 270 of file ncbiargs.hpp.

TFlags

typedef unsigned int CArgDescriptions::TFlags

Bitwise OR of "EFlags".

Definition at line 676 of file ncbiargs.hpp.

THideStdArgs

typedef int CArgDescriptions::THideStdArgs

Binary OR of "EHideStdArgs".

Definition at line 1074 of file ncbiargs.hpp.

TInterval [1/2]

typedef pair<Int8, Int8> CArgAllow_Int8s::TInterval

protected

Definition at line 1733 of file ncbiargs.hpp.

TInterval [2/2]

typedef pair<double,double> CArgAllow_Doubles::TInterval

protected

Definition at line 1807 of file ncbiargs.hpp.

TKeyFlagArgs

typedef list<string> CArgDescriptions::TKeyFlagArgs

private

List of flag arguments.

Definition at line 1117 of file ncbiargs.hpp.

TMiscFlags

typedef int CArgDescriptions::TMiscFlags

Bitwise OR of "EMiscFlags".

Definition at line 1036 of file ncbiargs.hpp.

TPosArgs

typedef vector<string> CArgDescriptions::TPosArgs

private

Positional arg. vector.

Definition at line 1116 of file ncbiargs.hpp.

TStringArray

typedef vector<string> CArgValue::TStringArray

Some values types can contain several value lists.

Example: CGIs pass list selections by repeating the same name

Definition at line 293 of file ncbiargs.hpp.

TStrings

typedef set<string, PNocase_Conditional> CArgAllow_Strings::TStrings

protected

Type of the container that contains the allowed string values.

See also

m_Strings

Definition at line 1688 of file ncbiargs.hpp.

TSymClass

typedef pair<ESymbolClass, string> CArgAllow_Symbols::TSymClass

protected

Definition at line 1580 of file ncbiargs.hpp.

Enumeration Type Documentation

EArgPositionalMode

enum CArgDescriptions::EArgPositionalMode

Processing of positional arguments.

In strict mode any value starting with '-' is treated as a key/flag unless any positional arguments have already been found (e.g. after '–' argument). In loose mode any argument is treated as positional if it can not be processed as a valid key or flag.

Enumerator
ePositionalMode_Strict	Strict mode (default)
ePositionalMode_Loose	Loose mode.

Definition at line 576 of file ncbiargs.hpp.

EArgSetType

enum CArgDescriptions::EArgSetType

Type of CArgDescriptions For a CGI application positional arguments and flags does not make sense (this syntax cannot be expressed by CGI protocol)

Enumerator
eRegularArgs	Regular application.
eCgiArgs	CGI application.

Definition at line 559 of file ncbiargs.hpp.

EArgValueFlags

enum CArgValue::EArgValueFlags

Whether the argument:

See also

GetDefault()

Enumerator
fArgValue_HasDefault	Has default value.
fArgValue_FromDefault	Not provided in command line.

Definition at line 311 of file ncbiargs.hpp.

ECommandArgFlags

enum CCommandArgDescriptions::ECommandArgFlags

Enumerator
eCommandMandatory	Nonempty command is required.
eCommandOptional	Command is not necessary.
eNoSortCommands	On PrintUsage, keep commands unsorted.
eNoSortGroups	On PrintUsage, keep command groups unsorted.

Definition at line 1384 of file ncbiargs.hpp.

ECommandFlags

enum CCommandArgDescriptions::ECommandFlags

Enumerator
eDefault
eHidden	Hide command in Usage.

Definition at line 1409 of file ncbiargs.hpp.

EConstraintNegate

enum CArgDescriptions::EConstraintNegate

Flag to invert constraint logically.

Enumerator
eConstraintInvert	Logical NOT.
eConstraint	Constraint is not inverted (taken as is)

Definition at line 922 of file ncbiargs.hpp.

EDependency

enum CArgDescriptions::EDependency

Dependencies between arguments.

Enumerator
eRequires	One argument requires another.
eExcludes	One argument excludes another.

Definition at line 955 of file ncbiargs.hpp.

EErrCode [1/2]

enum CArgException::EErrCode

Error types for improperly formatted arguments.

These error conditions are checked for and caught when processing arguments.

Enumerator
eInvalidArg	Invalid argument.
eNoValue	Expecting an argument value.
eExcludedValue	The value is excluded by another argument.
eWrongCast	Incorrect cast for an argument.
eConvert	Conversion problem.
eNoFile	Expecting a file.
eConstraint	Argument value outside constraints.
eArgType	Wrong argument type.
eNoArg	No argument.
eSynopsis	Synopsis error.

Definition at line 126 of file ncbiargs.hpp.

EErrCode [2/2]

enum CArgHelpException::EErrCode

Error type for help exception.

Enumerator
eHelp	Error code for short help message.
eHelpFull	Error code for detailed help message.
eHelpShowAll	Error code for detailed help message which includes hidden arguments.
eHelpXml	Error code for XML formatted help message.
eHelpErr	Show short help message and return error.

Definition at line 161 of file ncbiargs.hpp.

EFileFlags

enum CArgValue::EFileFlags

Enumerator
fBinary	Open file in binary mode.
fText	Open file in text mode.
fAppend	Open file in append mode.
fTruncate	Open file in truncate mode.
fNoCreate	Open existing file, never create it.
fCreatePath	If needed, create directory where the file is located.

Definition at line 262 of file ncbiargs.hpp.

EFlags

enum CArgDescriptions::EFlags

Additional flags, the first group is file related flags.

Must match the argument type, or an exception will be thrown. ( File related are for eInputFile and eOutputFiler argument types.)

Enumerator
fPreOpen	Open file right away; for eInputFile, eOutputFile, eIOFile.
fBinary	Open as binary file; for eInputFile, eOutputFile, eIOFile.
fAppend	Append to end-of-file; for eOutputFile or eIOFile.
fTruncate	Delete contents of an existing file; for eOutputFile or eIOFile.
fNoCreate	If the file does not exist, do not create it; for eOutputFile or eIOFile.
fCreatePath	If needed, create directory where the file is located.
fFileFlags	Mask for all file-related flags.
fAllowMultiple	Repeated key arguments are legal (use with AddKey)
fIgnoreInvalidValue	Ignore invalid argument values. If not set, exceptions will be thrown on invalid values.
fWarnOnInvalidValue	Post warning when an invalid value is ignored (no effect if fIgnoreInvalidValue is not set).
fOptionalSeparator	Allow to ignore separator between the argument's name and value. Usual ' ' or '=' separators can still be used with the argument. The following restrictions apply to a no-separator argument: the argument must be a key (including optional or default); the argument's name must be a single char; no other argument's name can start with the same char, unless fOptionalSeparatorAllowConflict is also specified.
fOptionalSeparatorAllowConflict	For arguments with fOptionalSeparator flag, allow other arguments which names begin with the same char.
fMandatorySeparator	Require '=' separator.
fHidden	Hide it in Usage.
fConfidential	Confidential argument Such arguments can be read from command line, from file, or from console. On command line, they can appear in one of the following forms: -key – read value from console, with automatically generated prompt -key-file fname – read value from file 'fname', if 'fname' equals '-', read value from standard input (stdin) without any prompt -key-verbatim value – read value from the command line, as is

Definition at line 614 of file ncbiargs.hpp.

EFlagValue

enum CArgDescriptions::EFlagValue

Define how flag presence affect CArgValue::HasValue().

See also

AddFlag

Enumerator
eFlagHasValueIfMissed
eFlagHasValueIfSet

Definition at line 749 of file ncbiargs.hpp.

EHideStdArgs

enum CArgDescriptions::EHideStdArgs

Which standard flag's descriptions should not be displayed in the usage message.

Do not display descriptions of the standard flags such as the -h, -logfile, -conffile, -version flags in the usage message. Note that you still can pass them in the command line.

Enumerator
fHideLogfile	Hide log file description.
fHideConffile	Hide configuration file description.
fHideVersion	Hide version description.
fHideFullVersion	Hide full version description.
fHideDryRun	Hide dryrun description.
fHideHelp	Hide help description.
fHideFullHelp	Hide full help description.
fHideXmlHelp	Hide XML help description.
fHideAll	Hide all standard argument descriptions.

Definition at line 1063 of file ncbiargs.hpp.

EInstantSet

enum CArgDependencyGroup::EInstantSet

Control whether the "setting" of this particular member marks the whole group as "set" regardless of the value passed to SetMinMembers()

See also

SetMinMembers(), Add()

Enumerator
eNoInstantSet
eInstantSet

Definition at line 1935 of file ncbiargs.hpp.

EMiscFlags

enum CArgDescriptions::EMiscFlags

Miscellaneous flags.

Enumerator
fNoUsage	Do not print USAGE on argument error.
fUsageIfNoArgs	Force printing USAGE (and then exit) if no command line args are present.
fUsageSortArgs	Sort args when printing USAGE.
fDupErrToCerr	Print arg error to both log and cerr.
fMisc_Default

Definition at line 1027 of file ncbiargs.hpp.

EPostCheckCaller

enum CArgDescriptions::EPostCheckCaller

private

See also

x_PostCheck()

Enumerator
eCreateArgs	called by CreateArgs()
eConvertKeys	called by ConvertKeys()

Definition at line 1218 of file ncbiargs.hpp.

ESymbolClass

enum CArgAllow_Symbols::ESymbolClass

Symbol class for defining sets of characters.

Symbol character classes patterned after those defined in <ctype.h>.

Enumerator
eAlnum	Alphanumeric characters.
eAlpha	Alphabet characters.
eCntrl	Control characters.
eDigit	Digit characters.
eGraph	Graphical characters.
eLower	Lowercase characters.
ePrint	Printable characters.
ePunct	Punctuation characters.
eSpace	Space characters.
eUpper	Uppercase characters.
eXdigit	Hexadecimal characters.
eUser	User defined characters using constructor with string&.

Definition at line 1540 of file ncbiargs.hpp.

EType

enum CArgDescriptions::EType

Available argument types.

Enumerator
eString	An arbitrary string.
eBoolean	{'true', 't', 'false', 'f'}, case-insensitive
eInt8	Convertible into an integer number (Int8 only)
eInteger	Convertible into an integer number (int or Int8)
eIntId	Convertible to TIntId (int or Int8 depending on NCBI_INT8_GI)
eDouble	Convertible into a floating point number (double)
eInputFile	Name of file (must exist and be readable)
eOutputFile	Name of file (must be writable)
eIOFile	Name of file (must be writable)
eDirectory	Name of file directory.
eDataSize	Integer number with possible "software" qualifiers (KB, KiB, et al)
eDateTime	DateTime string, formats: "M/D/Y h:m:s", "Y-M-DTh:m:g", "Y/M/D h:m:g", "Y-M-D h:m:g". Time string can have trailing 'Z' symbol, specifying that it represent time in the UTC format.
k_EType_Size	For internal use only.

Definition at line 588 of file ncbiargs.hpp.

Function Documentation

Add() [1/3]

CArgDependencyGroup & CArgDependencyGroup::Add	(	CArgDependencyGroup *	dep_group,
		EInstantSet	instant_set = eNoInstantSet
	)

Make another dependency group a member of this dependency group.

Attention

The "dep_group" will be added by reference, and its lifetime will be managed according to the usual CObject/CRef rules.

Parameters

instant_set

"eInstantSet" means that if the added group ("dep_group") is set, then the SetMinMembers() condition doesn't apply anymore.

Returns

"*this"

Definition at line 4932 of file ncbiargs.cpp.

References CArgDependencyGroup::m_Groups.

Add() [2/3]

void CArgs::Add	(	CArgValue *	arg,
		bool	update = false,
		bool	add_value = false
	)

Add new argument name and value.

Throw an exception if the "name" is not an empty string, and if there is an argument with this name already and "update" parameter is not set.

HINT: Use empty "name" to add extra (unnamed) args, and they will be automagically assigned with the virtual names: "#1", "#2", "#3", etc.

Parameters

arg	argument value added to the collection
update	when TRUE and argument already exists it will be replaced when FALSE throws an exception
add_value	when TRUE and argument already exists the value is added to the string list (multiple argument)

Definition at line 1917 of file ncbiargs.cpp.

References _ASSERT, CArgValue::AsString(), set< Key, Compare >::end(), CArgValue::GetName(), set< Key, Compare >::insert(), CArgs::m_Args, CArgValue::m_Name, CArgs::m_nExtra, NCBI_THROW, CArgs::Remove(), s_ComposeNameExtra(), CArgValue::SetOrdinalPosition(), CArgValue::SetStringList(), set< Key, Compare >::size(), CArgDescriptions::VerifyName(), and CArgs::x_Find().

Referenced by CArgDescriptions::x_PostCheck().

Add() [3/3]

CArgDependencyGroup & CArgDependencyGroup::Add	(	const string &	arg_name,
		EInstantSet	instant_set = eNoInstantSet
	)

Make a regular argument a member of this dependency group.

An argument with this name will need to be added separately using CArgDescriptions::AddXXX().

Parameters

arg_name	Name of the argument, as specified in CArgDescriptions::AddXXX()
instant_set	"eInstantSet" means that if the added argument ("arg_name") is set, then the SetMinMembers() condition doesn't apply anymore.

Returns

"*this"

Definition at line 4926 of file ncbiargs.cpp.

References CArgDependencyGroup::m_Arguments.

AddAlias()

void CArgDescriptions::AddAlias	(	const string &	alias,
		const string &	arg_name
	)

Add argument alias.

The alias can be used in the command line instead of the original argument. Accessing argument value by its alias is not allowed (will be reported as an unknown argument). The alias will be printed in USAGE after the original argument name.

Parameters

alias	New alias for a real argument.
arg_name	The real argument's name.

Definition at line 2557 of file ncbiargs.cpp.

References kEmptyStr, and CArgDescriptions::x_AddDesc().

Referenced by s_AddLatencyOptions(), CPsgClientApp::s_InitRequest(), CGappedArgs::SetArgumentDescriptions(), and CInputStreamSource::SetStandardInputArgs().

AddCommand()

void CCommandArgDescriptions::AddCommand	(	const string &	cmd,
		CArgDescriptions *	description,
		const string &	alias = kEmptyStr,
		ECommandFlags	flags = eDefault
	)

Add command argument descriptions.

Parameters

cmd	Command string
description	Argument description
alias	Alternative name of the command
flags	Optional flags

Definition at line 4015 of file ncbiargs.cpp.

References cmd, command, CArgDescriptions::Delete(), CCommandArgDescriptions::eHidden, map_checker< Container >::erase(), CArgDescriptions::Exist(), flags, kEmptyStr, CCommandArgDescriptions::m_Aliases, CArgDescriptions::m_AutoHelp, CCommandArgDescriptions::m_Commands, CCommandArgDescriptions::m_CurrentCmdGroup, CCommandArgDescriptions::m_Description, CCommandArgDescriptions::m_Groups, CArgDescriptions::m_HasHidden, NCBI_THROW, s_AutoHelp, s_AutoHelpFull, s_AutoHelpShowAll, s_AutoHelpXml, CCommandArgDescriptions::SetCurrentCommandGroup(), and NStr::TruncateSpaces().

AddCommandDescription()

void CArgDescriptions::CPrintUsage::AddCommandDescription	(	list< string > &	arr,
		const string &	cmd,
		const map< string, string > *	aliases,
		size_t	max_cmd_len,
		bool	detailed
	)		const

Definition at line 3709 of file ncbiargs.cpp.

References a, arr, cmd, map_checker< Container >::end(), map_checker< Container >::find(), kEmptyStr, and string.

Referenced by CCommandArgDescriptions::PrintUsage().

AddDefaultFileArguments()

void CArgDescriptions::AddDefaultFileArguments

(

const string &

default_config

)

Add logfile and conffile arguments.

Definition at line 2229 of file ncbiargs.cpp.

References CArgDescriptions::AddDefaultKey(), CArgDescriptions::AddOptionalKey(), CArgDescriptions::eInputFile, CArgDescriptions::eOutputFile, CArgDescriptions::Exist(), s_ArgCfgFile, and s_ArgLogFile.

AddDefaultKey()

void CArgDescriptions::AddDefaultKey	(	const string &	name,
		const string &	synopsis,
		const string &	comment,
		EType	type,
		const string &	default_value,
		TFlags	flags = 0,
		const string &	env_var = kEmptyStr,
		const char *	display_value = nullptr
	)

Add description for optional key with default value.

Optional key with default value has the following syntax:

arg_key_dflt := [-<key>

]

Will throw exception CArgException if:

• description with name "name" already exists
• "name" contains symbols other than {alnum, '-', '_'}
• "name" starts with more than one '-'
• "synopsis" contains symbols other than {alnum, '_'}
• "flags" are inconsistent with "type"

Any argument can be later referenced using its unique name "name".

Parameters

name	Name of argument key
synopsis	Synopsis for argument
comment	Argument description
type	Argument type
default_value	Default value
flags	Optional flags
env_var	Optional name of environment variable that contains default value
display_value	Default value shown in Usage

Definition at line 2441 of file ncbiargs.cpp.

References flags, and CArgDescriptions::x_AddDesc().

Referenced by CFlatFileConfig::AddArgumentDescriptions(), CArgDescriptions::AddDefaultFileArguments(), CWinMaskConfig::AddWinMaskArgs(), CSdbapiTest::Init(), CAVApp::Init(), CId2FetchApp::Init(), CSdbapiSimpleApp::Init(), CDbapiTestSpeedApp::InitSample(), s_InitPsgOptions(), CPsgClientApp::s_InitRequest(), CStdCmdLineArgs::SetArgumentDescriptions(), CTaskCmdLineArgs::SetArgumentDescriptions(), COffDiagonalRangeArg::SetArgumentDescriptions(), CRMBlastNArg::SetArgumentDescriptions(), CGenericSearchArgs::SetArgumentDescriptions(), CFilteringArgs::SetArgumentDescriptions(), CCompositionBasedStatsArgs::SetArgumentDescriptions(), CLargestIntronSizeArgs::SetArgumentDescriptions(), CGeneticCodeArgs::SetArgumentDescriptions(), CGapTriggerArgs::SetArgumentDescriptions(), CPssmEngineArgs::SetArgumentDescriptions(), CPsiBlastArgs::SetArgumentDescriptions(), CKBlastpArgs::SetArgumentDescriptions(), CDeltaBlastArgs::SetArgumentDescriptions(), CMappingArgs::SetArgumentDescriptions(), CQueryOptionsArgs::SetArgumentDescriptions(), CMapperQueryOptionsArgs::SetArgumentDescriptions(), CIgBlastArgs::SetArgumentDescriptions(), CFormattingArgs::SetArgumentDescriptions(), CMapperFormattingArgs::SetArgumentDescriptions(), CMTArgs::SetArgumentDescriptions(), CMbIndexArgs::SetArgumentDescriptions(), CSRASearchModeArgs::SetArgumentDescriptions(), CMapperGenericSearchArgs::SetArgumentDescriptions(), CMapperNuclArgs::SetArgumentDescriptions(), CMapperLargestIntronSizeArgs::SetArgumentDescriptions(), CInputStreamSource::SetStandardInputArgs(), CAdvancedAlignCleanup::SetupArgDescriptions(), CSplignArgUtil::SetupArgDescriptions(), CAlignCollapser::SetupArgDescriptions(), CGnomonAnnotatorArgUtil::SetupArgDescriptions(), CChainerArgUtil::SetupArgDescriptions(), CMultAlign::SetupArgDescriptions(), CCompartOptions::SetupArgDescriptions(), CProSplignOptions_Base::SetupArgDescriptions(), CProSplignScoring::SetupArgDescriptions(), CProSplignOutputOptions::SetupArgDescriptions(), CDBLBClientApp::x_InitLookup(), CDBLBClientApp::x_InitWhereIs(), and CTbl2AsnApp::x_SetAlnArgs().

AddDefaultPositional()

void CArgDescriptions::AddDefaultPositional	(	const string &	name,
		const string &	comment,
		EType	type,
		const string &	default_value,
		TFlags	flags = 0,
		const string &	env_var = kEmptyStr,
		const char *	display_value = nullptr
	)

Add description for optional positional argument with default value.

Optional positional argument with default value has the following syntax:

arg_pos_dflt := [

]

Will throw exception CArgException if:

• description with name "name" already exists
• "name" contains symbols other than {alnum, '-', '_'}
• "name" starts with more than one '-'
• "flags" are inconsistent with "type"

See also

NOTE for AddPositional()

Parameters

name	Name of argument
comment	Argument description
type	Argument type
default_value	Default value
flags	Optional flags
env_var	Optional name of environment variable that contains default value
display_value	Default value shown in Usage

Definition at line 2511 of file ncbiargs.cpp.

References flags, and CArgDescriptions::x_AddDesc().

AddDependencyGroup()

void CArgDescriptions::AddDependencyGroup

(

CArgDependencyGroup *

dep_group

)

Add a dependency group.

The argument constraints specified by the dependency group(s) will be processed only after all regular dependencies for arguments and dependency groups have been processed.

Attention

The "dep_group" will be added by reference, and its lifetime will then be managed according to the usual CObject/CRef rules.

See also

SetDependency()

Definition at line 2586 of file ncbiargs.cpp.

References set< Key, Compare >::insert(), and CArgDescriptions::m_DependencyGroups.

AddDescription()

void CArgDescriptions::CPrintUsage::AddDescription	(	list< string > &	arr,
		bool	detailed
	)		const

Definition at line 3696 of file ncbiargs.cpp.

References arr, and s_PrintCommentBody().

Referenced by CArgDescriptions::PrintUsage(), and CCommandArgDescriptions::PrintUsage().

AddDetails()

void CArgDescriptions::CPrintUsage::AddDetails

(

list< string > &

arr

)

const

Definition at line 3732 of file ncbiargs.cpp.

References arr, NStr::fWrap_Hyphenate, i, kEmptyStr, kMax_UInt, s_IsFlag(), s_IsOptional(), s_PrintCommentBody(), string, NStr::UIntToString(), and NStr::Wrap().

Referenced by CArgDescriptions::PrintUsage(), and CCommandArgDescriptions::PrintUsage().

AddExtra()

void CArgDescriptions::AddExtra	(	unsigned	n_mandatory,
		unsigned	n_optional,
		const string &	comment,
		EType	type,
		TFlags	flags = 0
	)

Add description for the extra, unnamed positional arguments.

The name of this description is always an empty string. Names of the resulting arg.values will be: "#1", "#2", ... By default, no extra args are allowed.

To allow an unlimited # of optional argumens pass "n_optional" = kMax_UInt.

Will throw exception CArgException if:

• description with name "name" already exists
• "flags" are inconsistent with "type"

Parameters

n_mandatory	Number of mandatory args
n_optional	Number of optional args
comment	Argument description
type	Argument type
flags	Optional flags

Definition at line 2528 of file ncbiargs.cpp.

References flags, kEmptyStr, CArgDescriptions::m_nExtra, CArgDescriptions::m_nExtraOpt, NCBI_THROW, and CArgDescriptions::x_AddDesc().

Referenced by CPsgClientApp::s_InitRequest().

AddFlag()

void CArgDescriptions::AddFlag	(	const string &	name,
		const string &	comment,
		CBoolEnum< EFlagValue >	set_value = eFlagHasValueIfSet,
		TFlags	flags = 0
	)

Add description for flag argument.

Flag argument has the following syntax:

arg_flag := -<flag>, <flag> := "name"

If argument "set_value" is eFlagHasValueIfSet (TRUE), then:

• if the flag is provided (in the command-line), then the resultant CArgValue::HasValue() will be TRUE;
• else it will be FALSE.

Setting argument "set_value" to FALSE will reverse the above meaning.

NOTE: If CArgValue::HasValue() is TRUE, then AsBoolean() is always TRUE.

Parameters

name	Name of argument
comment	Argument description
flags	Optional flags

Definition at line 2459 of file ncbiargs.cpp.

References CArgDescriptions::eFlagHasValueIfSet, flags, and CArgDescriptions::x_AddDesc().

Referenced by CFlatFileConfig::AddArgumentDescriptions(), CLocalTaxon::AddArguments(), CArgDescriptions::AddStdArguments(), CWinMaskConfig::AddWinMaskArgs(), COMSSA::AppInit(), CArgDescriptions::CArgDescriptions(), CAVApp::Init(), SUApp::Init(), Cn3DNoWin::Init(), CId2FetchApp::Init(), CNcbiTestApplication::Init(), s_AddLatencyOptions(), s_CommandlessInit(), s_InitDataFlags(), s_InitDataOnly(), s_InitPsgOptions(), CPsgClientApp::s_InitRequest(), CStdCmdLineArgs::SetArgumentDescriptions(), CRMBlastNArg::SetArgumentDescriptions(), CNuclArgs::SetArgumentDescriptions(), CCompositionBasedStatsArgs::SetArgumentDescriptions(), CGappedArgs::SetArgumentDescriptions(), CPsiBlastArgs::SetArgumentDescriptions(), CDeltaBlastArgs::SetArgumentDescriptions(), CQueryOptionsArgs::SetArgumentDescriptions(), CMapperQueryOptionsArgs::SetArgumentDescriptions(), CBlastDatabaseArgs::SetArgumentDescriptions(), CIgBlastArgs::SetArgumentDescriptions(), CFormattingArgs::SetArgumentDescriptions(), CMapperFormattingArgs::SetArgumentDescriptions(), CRemoteArgs::SetArgumentDescriptions(), CDebugArgs::SetArgumentDescriptions(), CHspFilteringArgs::SetArgumentDescriptions(), CSRASearchModeArgs::SetArgumentDescriptions(), CMapperGenericSearchArgs::SetArgumentDescriptions(), CAdvancedAlignCleanup::SetupArgDescriptions(), CAlignCollapser::SetupArgDescriptions(), CGnomonAnnotatorArgUtil::SetupArgDescriptions(), CChainerArgUtil::SetupArgDescriptions(), CGridWorkerApp::SetupArgDescriptions(), CProSplignOptions_Base::SetupArgDescriptions(), CProSplignOutputOptions::SetupArgDescriptions(), CDBLBClientApp::x_InitLookup(), and CDBLBClientApp::x_InitWhereIs().

AddKey()

void CArgDescriptions::AddKey	(	const string &	name,
		const string &	synopsis,
		const string &	comment,
		EType	type,
		TFlags	flags = 0
	)

Add description for mandatory key.

Mandatory key has the syntax:

arg_key := -<key>

Will throw exception CArgException if:

• description with name "name" already exists
• "name" contains symbols other than {alnum, '-', '_'}
• "name" starts with more than one '-'
• "synopsis" contains symbols other than {alnum, '_'}
• "flags" are inconsistent with "type"

Any argument can be later referenced using its unique name "name".

Parameters

name	Name of argument key
synopsis	Synopsis for argument
comment	Argument description
type	Argument type
flags	Optional flags

Definition at line 2411 of file ncbiargs.cpp.

References flags, and CArgDescriptions::x_AddDesc().

Referenced by CWinMaskConfig::AddWinMaskArgs(), CAVApp::Init(), SUApp::Init(), Cn3DNoWin::Init(), CPsgClientApp::s_InitRequest(), CTaskCmdLineArgs::SetArgumentDescriptions(), CBlastDatabaseArgs::SetArgumentDescriptions(), CInputStreamSource::SetStandardInputArgs(), CGnomonAnnotatorArgUtil::SetupArgDescriptions(), CChainerArgUtil::SetupArgDescriptions(), and CDBLBClientApp::x_InitLookup().

AddNegatedFlagAlias()

void CArgDescriptions::AddNegatedFlagAlias	(	const string &	alias,
		const string &	arg_name,
		const string &	comment = kEmptyStr
	)

Add negated alias for a flag argument.

Using the alias in the command line produces the same effect as using the original flag with the opposite value. If 'arg_name' does not describe a flag argument, an exception is thrown.

See also

AddAlias()

Definition at line 2568 of file ncbiargs.cpp.

References set< Key, Compare >::end(), CArgDescriptions::m_Args, NCBI_THROW, orig, s_IsFlag(), CArgDescriptions::x_AddDesc(), and CArgDescriptions::x_Find().

AddOpening()

void CArgDescriptions::AddOpening	(	const string &	name,
		const string &	comment,
		EType	type,
		TFlags	flags = 0
	)

Add description of mandatory opening positional argument.

Mandatory opening argument has the following syntax: arg_pos :=

NOTE: In command line, mandatory opening arguments must go first, before any other arguments; their order is defined by the order in which they were described and added into CArgDescriptions.

Will throw exception CArgException if:

• description with name "name" already exists
• "name" contains symbols other than {alnum, '-', '_'}
• "name" starts with more than one '-'
• "flags" are inconsistent with "type"

Any argument can be later referenced using its unique name "name".

Parameters

name	Name of argument
comment	Argument description
type	Argument type
flags	Optional flags

Definition at line 2484 of file ncbiargs.cpp.

References flags, and CArgDescriptions::x_AddDesc().

Referenced by s_InitCreate(), and s_InitPost().

AddOptionalKey()

void CArgDescriptions::AddOptionalKey	(	const string &	name,
		const string &	synopsis,
		const string &	comment,
		EType	type,
		TFlags	flags = 0
	)

Add description for optional key without default value.

Optional key without default value has the following syntax:

arg_key_opt := [-<key>

]

Will throw exception CArgException if:

• description with name "name" already exists
• "name" contains symbols other than {alnum, '-', '_'}
• "name" starts with more than one '-'
• "synopsis" contains symbols other than {alnum, '_'}
• "flags" are inconsistent with "type"

Any argument can be later referenced using its unique name "name".

Parameters

name	Name of argument key
synopsis	Synopsis for argument
comment	Argument description
type	Argument type
flags	Optional flags

Definition at line 2426 of file ncbiargs.cpp.

References flags, and CArgDescriptions::x_AddDesc().

Referenced by CFlatFileConfig::AddArgumentDescriptions(), CGenomicCollectionsService::AddArguments(), CLocalTaxon::AddArguments(), CArgDescriptions::AddDefaultFileArguments(), CArgDescriptions::AddStdArguments(), CWinMaskConfig::AddWinMaskArgs(), SUApp::Init(), Cn3DNoWin::Init(), CId2FetchApp::Init(), CNcbiTestApplication::Init(), CDbapiTestSpeedApp::InitSample(), CLangQueryApp::InitSample(), s_InitDataOnly(), s_InitPost(), s_InitPsgOptions(), CPsgClientApp::s_InitRequest(), CStdCmdLineArgs::SetArgumentDescriptions(), CWindowSizeArg::SetArgumentDescriptions(), CWordThresholdArg::SetArgumentDescriptions(), CMatrixNameArg::SetArgumentDescriptions(), CGenericSearchArgs::SetArgumentDescriptions(), CFilteringArgs::SetArgumentDescriptions(), CNuclArgs::SetArgumentDescriptions(), CDiscontiguousMegablastArgs::SetArgumentDescriptions(), CGappedArgs::SetArgumentDescriptions(), CFrameShiftArgs::SetArgumentDescriptions(), CSearchStrategyArgs::SetArgumentDescriptions(), CPsiBlastArgs::SetArgumentDescriptions(), CPhiBlastArgs::SetArgumentDescriptions(), CMappingArgs::SetArgumentDescriptions(), CQueryOptionsArgs::SetArgumentDescriptions(), CMapperQueryOptionsArgs::SetArgumentDescriptions(), CBlastDatabaseArgs::SetArgumentDescriptions(), CIgBlastArgs::SetArgumentDescriptions(), CFormattingArgs::SetArgumentDescriptions(), CMapperFormattingArgs::SetArgumentDescriptions(), CHspFilteringArgs::SetArgumentDescriptions(), CMbIndexArgs::SetArgumentDescriptions(), CMapperStdCmdLineArgs::SetArgumentDescriptions(), CInputStreamSource::SetStandardInputArgs(), CAdvancedAlignCleanup::SetupArgDescriptions(), CSplignArgUtil::SetupArgDescriptions(), CChainerArgUtil::SetupArgDescriptions(), CGridWorkerApp::SetupArgDescriptions(), CRemoteCgiApp::SetupArgDescriptions(), CDBLBClientApp::x_InitLookup(), and CTbl2AsnApp::x_SetAlnArgs().

AddOptionalPositional()

void CArgDescriptions::AddOptionalPositional	(	const string &	name,
		const string &	comment,
		EType	type,
		TFlags	flags = 0
	)

Add description for optional positional argument without default value.

Optional positional argument, without default value has the following syntax:

arg_pos_opt := [

]

Will throw exception CArgException if:

• description with name "name" already exists
• "name" contains symbols other than {alnum, '-', '_'}
• "name" starts with more than one '-'
• "flags" are inconsistent with "type"

Any argument can be later referenced using its unique name "name".

See also

NOTE for AddPositional()

Parameters

name	Name of argument
comment	Argument descr.
type	Argument type
flags	Optional flags

Definition at line 2497 of file ncbiargs.cpp.

References flags, and CArgDescriptions::x_AddDesc().

Referenced by s_InitQuery(), and CPsgClientApp::s_InitRequest().

AddPositional()

void CArgDescriptions::AddPositional	(	const string &	name,
		const string &	comment,
		EType	type,
		TFlags	flags = 0
	)

Add description for mandatory positional argument.

Mandatory positional argument has the following syntax:

arg_pos :=

NOTE: For all types of positional arguments:

• The order is important! That is, the N-th positional argument passed in the cmd.-line will be matched against (and processed according to) the N-th added named positional argument description.
• Mandatory positional args always go first.

Will throw exception CArgException if:

• description with name "name" already exists
• "name" contains symbols other than {alnum, '-', '_'}
• "name" starts with more than one '-'
• "flags" are inconsistent with "type"

Any argument can be later referenced using its unique name "name".

Parameters

name	Name of argument
comment	Argument description
type	Argument type
flags	Optional flags

Definition at line 2471 of file ncbiargs.cpp.

References flags, and CArgDescriptions::x_AddDesc().

Referenced by CAVApp::Init(), CSdbapiSimpleApp::Init(), s_CommandlessInit(), s_InitPost(), CPsgClientApp::s_InitRequest(), CDBLBClientApp::x_InitWhatIs(), and CDBLBClientApp::x_InitWhereIs().

AddStdArguments() [1/2]

void CArgDescriptions::AddStdArguments ( THideStdArgs  mask )

virtual

Add standard arguments.

Reimplemented in CCommandArgDescriptions.

Definition at line 2253 of file ncbiargs.cpp.

References CArgDescriptions::AddFlag(), CArgDescriptions::AddOptionalKey(), CArgDescriptions::Delete(), CArgDescriptions::eInputFile, CArgDescriptions::eOutputFile, CArgDescriptions::Exist(), CArgDescriptions::fHideConffile, CArgDescriptions::fHideDryRun, CArgDescriptions::fHideFullHelp, CArgDescriptions::fHideFullVersion, CArgDescriptions::fHideHelp, CArgDescriptions::fHideLogfile, CArgDescriptions::fHideVersion, CArgDescriptions::fHideXmlHelp, CArgDescriptions::m_AutoHelp, CArgDescriptions::m_HasHidden, mask, s_ArgCfgFile, s_ArgDryRun, s_ArgFullVersion, s_ArgFullVersionJson, s_ArgFullVersionXml, s_ArgLogFile, s_ArgVersion, s_AutoHelp, s_AutoHelpFull, s_AutoHelpShowAll, and s_AutoHelpXml.

Referenced by CCommandArgDescriptions::AddStdArguments().

AddStdArguments() [2/2]

void CCommandArgDescriptions::AddStdArguments ( THideStdArgs  mask )

virtual

Add standard arguments.

Reimplemented from CArgDescriptions.

Definition at line 4121 of file ncbiargs.cpp.

References CArgDescriptions::AddStdArguments(), CArgDescriptions::fHideConffile, CArgDescriptions::fHideDryRun, CArgDescriptions::fHideLogfile, CCommandArgDescriptions::m_Description, CArgDescriptions::m_HasHidden, mask, t, and CCommandArgDescriptions::x_IsCommandMandatory().

AddSynopsis()

void CArgDescriptions::CPrintUsage::AddSynopsis	(	list< string > &	arr,
		const string &	intro,
		const string &	prefix
	)		const

Definition at line 3660 of file ncbiargs.cpp.

References arr, CArgDescriptions::eCgiArgs, CArgDescSynopsis::GetSynopsis(), prefix, s_IsFlag(), s_IsOpening(), s_IsOptional(), s_IsPositional(), and NStr::WrapList().

Referenced by CArgDescriptions::PrintUsage(), and CCommandArgDescriptions::PrintUsage().

Allow() [1/5]

CArgAllow_Symbols & CArgAllow_Symbols::Allow

(

const string &

symbol_set

)

Definition at line 4495 of file ncbiargs.cpp.

References CArgAllow_Symbols::eUser, set< Key, Compare >::insert(), and CArgAllow_Symbols::m_SymClass.

Allow() [2/5]

CArgAllow_Strings * CArgAllow_Strings::Allow

(

const string &

value

)

Add allowed string values.

Parameters

value

String to add to the set of allowed string values

Definition at line 4598 of file ncbiargs.cpp.

References set< Key, Compare >::insert(), CArgAllow_Strings::m_Strings, and rapidjson::value.

Referenced by CWinMaskConfig::AddWinMaskArgs(), CArgAllow_Strings::AllowValue(), CAppHitFilter::Init(), CAppNWA::Init(), CSplignApp::Init(), CPrimeCacheApplication::Init(), CConvert2BlastMaskApplication::Init(), CDustMaskApplication::Init(), SegMaskerApplication::Init(), CHttpSessionApp::Init(), NCBITEST_INIT_CMDLINE(), and CSplignArgUtil::SetupArgDescriptions().

Allow() [3/5]

CArgAllow_Doubles & CArgAllow_Doubles::Allow

(

double

value

)

Definition at line 4880 of file ncbiargs.cpp.

References set< Key, Compare >::insert(), CArgAllow_Doubles::m_MinMax, and rapidjson::value.

Referenced by CArgAllow_Doubles::CArgAllow_Doubles().

Allow() [4/5]

CArgAllow_Symbols & CArgAllow_Symbols::Allow

(

CArgAllow_Symbols::ESymbolClass

symbol_class

)

Add allowed symbols.

Definition at line 4489 of file ncbiargs.cpp.

References set< Key, Compare >::insert(), kEmptyStr, and CArgAllow_Symbols::m_SymClass.

Referenced by CArgAllow_Symbols::CArgAllow_Symbols().

Allow() [5/5]

CArgAllow_Int8s & CArgAllow_Int8s::Allow

(

Int8

value

)

Definition at line 4749 of file ncbiargs.cpp.

References set< Key, Compare >::insert(), CArgAllow_Int8s::m_MinMax, and rapidjson::value.

Referenced by CArgAllow_Int8s::CArgAllow_Int8s().

AllowRange() [1/2]

CArgAllow_Doubles & CArgAllow_Doubles::AllowRange	(	double	from,
		double	to
	)

Add allowed values.

Definition at line 4874 of file ncbiargs.cpp.

References set< Key, Compare >::insert(), and CArgAllow_Doubles::m_MinMax.

Referenced by CArgAllow_Doubles::CArgAllow_Doubles().

AllowRange() [2/2]

CArgAllow_Int8s & CArgAllow_Int8s::AllowRange	(	Int8	from,
		Int8	to
	)

Add allow values.

Definition at line 4743 of file ncbiargs.cpp.

References set< Key, Compare >::insert(), and CArgAllow_Int8s::m_MinMax.

Referenced by CArgAllow_Int8s::CArgAllow_Int8s().

AllowValue()

CArgAllow_Strings & CArgAllow_Strings::AllowValue

(

const string &

value

)

Add allowed string values.

Parameters

value

String to add to the set of allowed string values

Definition at line 4656 of file ncbiargs.cpp.

References CArgAllow_Strings::Allow(), and rapidjson::value.

Referenced by CArgAllow_Strings::operator,().

AsBoolean()

virtual bool CArgValue::AsBoolean ( void  ) const

pure virtual

Get the argument's boolean value.

If you request a wrong value type, such as a call to "AsBoolean()" for a "integer" argument, an exception is thrown.

NOTE: Do not confuse HasValue(), operator bool() and AsBoolean(). The former two methods check if the argument has any value, they do not return its actual value.

See also

HasValue(), AsString(), AsInt8(), AsInteger, AsDouble()

Implemented in CArg_Boolean, CArg_String, CArg_ExcludedValue, and CArg_NoValue.

AsDateTime()

virtual const CTime& CArgValue::AsDateTime ( void  ) const

pure virtual

Get the argument as a DateTime.

Implemented in CArg_String, CArg_ExcludedValue, CArg_NoValue, and CArg_DateTime.

AsDirectory()

virtual const CDir& CArgValue::AsDirectory ( void  ) const

pure virtual

Get the argument as a directory.

Implemented in CArg_String, CArg_ExcludedValue, CArg_NoValue, and CArg_Dir.

AsDouble()

virtual double CArgValue::AsDouble ( void  ) const

pure virtual

Get the argument's double value.

If you request a wrong value type, such as a call to "AsDouble()" for a "boolean" argument, an exception is thrown.

See also

AsString(), AsInt8(), AsInteger, AsBoolean()

Implemented in CArg_Double, CArg_String, CArg_ExcludedValue, and CArg_NoValue.

AsInputFile()

virtual CNcbiIstream& CArgValue::AsInputFile ( TFileFlags  flags = 0 ) const

pure virtual

Get the argument as an input file stream.

Implemented in CArg_Ios, CArg_String, CArg_ExcludedValue, and CArg_NoValue.

Referenced by CDataTool::GenerateCode(), and CSplignApp::x_ReadFastaSetId().

AsInt8()

virtual Int8 CArgValue::AsInt8 ( void  ) const

pure virtual

Get the argument's integer (8-byte long) value.

If you request a wrong value type, such as a call to "AsInt8()" for a "boolean" argument, an exception is thrown. This will however work okay for "plain integer" argument.

See also

AsInteger(), AsString(), AsDouble, AsBoolean()

Implemented in CArg_DataSize, CArg_Int8, CArg_String, CArg_ExcludedValue, and CArg_NoValue.

AsInteger()

virtual int CArgValue::AsInteger ( void  ) const

pure virtual

Get the argument's integer value.

If you request a wrong value type, such as a call to "AsInteger()" for a "boolean" or even "Int8" argument, an exception is thrown.

See also

AsInt8(), AsString(), AsDouble, AsBoolean()

Implemented in CArg_IntId, CArg_Integer, CArg_String, CArg_ExcludedValue, and CArg_NoValue.

Referenced by CProjBulderApp::ParseArguments().

AsIntId()

virtual TIntId CArgValue::AsIntId ( void  ) const

pure virtual

Get the argument's value as an integer id (TIntId).

The actual value is Int4 or Int8 depending on the NCBI_INT8_GI definition.

If you request a wrong value type, such as a call to "AsIntId()" for a "boolean", an exception is thrown. Calling AsIntId() on an integer argument is always allowed. For an Int8 argument it will throw an exception if NCBI_INT8_GI is not defined.

See also

AsInteger(), AsInt8()

Implemented in CArg_IntId, CArg_Integer, CArg_Int8, CArg_String, CArg_ExcludedValue, and CArg_NoValue.

AsIOFile()

virtual CNcbiIostream& CArgValue::AsIOFile ( TFileFlags  flags = 0 ) const

pure virtual

Get the argument as a file stream.

Implemented in CArg_Ios, CArg_String, CArg_ExcludedValue, and CArg_NoValue.

AsOutputFile()

virtual CNcbiOstream& CArgValue::AsOutputFile ( TFileFlags  flags = 0 ) const

pure virtual

Get the argument as an output file stream.

Implemented in CArg_Ios, CArg_String, CArg_ExcludedValue, and CArg_NoValue.

Assign()

CArgs & CArgs::Assign

(

const CArgs &

other

)

Copy contents of another object into this one.

Definition at line 1770 of file ncbiargs.cpp.

References CArgs::m_Args, CArgs::m_Command, and CArgs::m_nExtra.

Referenced by CArgs::CArgs(), CCgiApplication::InitArgs(), CInputStreamSource::InitArgs(), CArgs::operator=(), and CXcompareAnnotsApplication::Run().

AsString()

virtual const string& CArgValue::AsString ( void  ) const

pure virtual

Get the argument's string value.

If it is a value of a flag argument, then return either "true" or "false".

See also

AsInteger(), AsInt8(), AsDouble(), AsBoolean()

Implemented in CArg_String, CArg_ExcludedValue, and CArg_NoValue.

Referenced by CArgs::Add(), ArgToSeq_id(), CCodeGenerator::GetOpt(), CProjBulderApp::ParseArguments(), CArgs::Print(), CAsn2Asn::RunAsn2Asn(), CMakeBlastDBApp::x_ProcessMaskData(), and CSplignApp::x_ReadFastaSetId().

CArgAllow()

CArgAllow::CArgAllow ( void  )

inlineprotected

Definition at line 1515 of file ncbiargs.hpp.

CArgAllow_Doubles() [1/3]

CArgAllow_Doubles::CArgAllow_Doubles	(	double	x_min,
		double	x_max
	)

Constructor specifying range of allowed double values.

Definition at line 4814 of file ncbiargs.cpp.

References CArgAllow_Doubles::AllowRange().

CArgAllow_Doubles() [2/3]

CArgAllow_Doubles::CArgAllow_Doubles

(

double

x_value

)

Constructor specifying an allowed double value.

Definition at line 4808 of file ncbiargs.cpp.

References CArgAllow_Doubles::Allow().

CArgAllow_Doubles() [3/3]

CArgAllow_Doubles::CArgAllow_Doubles ( void  )

inlineprotected

Definition at line 1803 of file ncbiargs.hpp.

Referenced by CArgAllow_Doubles::Clone().

CArgAllow_Int8s() [1/3]

CArgAllow_Int8s::CArgAllow_Int8s	(	Int8	x_min,
		Int8	x_max
	)

Constructor specifying range of allowed integer values.

Definition at line 4679 of file ncbiargs.cpp.

References CArgAllow_Int8s::AllowRange().

CArgAllow_Int8s() [2/3]

CArgAllow_Int8s::CArgAllow_Int8s

(

Int8

x_value

)

Constructor specifying an allowed integer value.

Definition at line 4673 of file ncbiargs.cpp.

References CArgAllow_Int8s::Allow().

CArgAllow_Int8s() [3/3]

CArgAllow_Int8s::CArgAllow_Int8s ( void  )

inlineprotected

Definition at line 1728 of file ncbiargs.hpp.

Referenced by CArgAllow_Int8s::Clone().

CArgAllow_Integers() [1/3]

CArgAllow_Integers::CArgAllow_Integers	(	int	x_min,
		int	x_max
	)

Constructor specifying range of allowed integer values.

Definition at line 4773 of file ncbiargs.cpp.

CArgAllow_Integers() [2/3]

CArgAllow_Integers::CArgAllow_Integers

(

int

x_value

)

Constructor specifying an allowed integer value.

Definition at line 4768 of file ncbiargs.cpp.

CArgAllow_Integers() [3/3]

CArgAllow_Integers::CArgAllow_Integers ( void  )

inlineprotected

Definition at line 1762 of file ncbiargs.hpp.

Referenced by CArgAllow_Integers::Clone().

CArgAllow_Regexp()

CArgAllow_Regexp::CArgAllow_Regexp

(

const string &

pattern

)

Parameters

pattern

Perl regexp pattern that the argument value must match

See also

CRegexp

Definition at line 45 of file arg_regexp.cpp.

Referenced by CArgAllow_Regexp::Clone().

CArgAllow_String() [1/3]

CArgAllow_String::CArgAllow_String

(

const string &

symbol_set

)

Constructor for user defined eUser class.

Definition at line 4521 of file ncbiargs.cpp.

CArgAllow_String() [2/3]

CArgAllow_String::CArgAllow_String

(

ESymbolClass

symbol_class

)

Constructor.

Definition at line 4514 of file ncbiargs.cpp.

CArgAllow_String() [3/3]

CArgAllow_String::CArgAllow_String ( void  )

inlineprotected

Definition at line 1618 of file ncbiargs.hpp.

Referenced by CArgAllow_String::Clone().

CArgAllow_Strings() [1/2]

CArgAllow_Strings::CArgAllow_Strings	(	initializer_list< string >	values,
		NStr::ECase	use_case = NStr::eCase
	)

Constructor.

Parameters

values	Strings to add to the set of allowed string values
use_case	If to ignore the case of the characters

Definition at line 4592 of file ncbiargs.cpp.

CArgAllow_Strings() [2/2]

CArgAllow_Strings::CArgAllow_Strings

(

NStr::ECase

use_case = NStr::eCase

)

Constructor.

Parameters

use_case

If to ignore the case of the characters

Definition at line 4584 of file ncbiargs.cpp.

Referenced by CArgAllow_Strings::Clone().

CArgAllow_Symbols() [1/3]

CArgAllow_Symbols::CArgAllow_Symbols

(

const string &

symbol_set

)

Constructor for user defined eUser class.

Definition at line 4437 of file ncbiargs.cpp.

References CArgAllow_Symbols::Allow().

CArgAllow_Symbols() [2/3]

CArgAllow_Symbols::CArgAllow_Symbols

(

ESymbolClass

symbol_class

)

Constructor.

Definition at line 4429 of file ncbiargs.cpp.

References CArgAllow_Symbols::Allow().

CArgAllow_Symbols() [3/3]

CArgAllow_Symbols::CArgAllow_Symbols ( void  )

inlineprotected

Definition at line 1576 of file ncbiargs.hpp.

Referenced by CArgAllow_Symbols::Clone().

CArgDependencyGroup() [1/2]

CArgDependencyGroup::CArgDependencyGroup ( const CArgDependencyGroup &  dep_group )

private

CArgDependencyGroup() [2/2]

CArgDependencyGroup::CArgDependencyGroup ( void  )

private

Definition at line 4905 of file ncbiargs.cpp.

Referenced by CArgDependencyGroup::Create().

CArgDesc()

CArgDesc::CArgDesc	(	const string &	name,
		const string &	comment,
		CArgDescriptions::TFlags	flags = 0
	)

Constructor.

Parameters

name	Argument name
comment	Argument description

Definition at line 923 of file ncbiargs.cpp.

References CArgDesc::m_Name, NCBI_THROW, and CArgDescriptions::VerifyName().

CArgDescriptions()

CArgDescriptions::CArgDescriptions	(	bool	auto_help = true,
		CArgErrorHandler *	err_handler = 0
	)

Constructor.

If "auto_help" is passed TRUE, then a special flag "-h" will be added to the list of accepted arguments. Passing "-h" in the command line will printout USAGE and ignore all other passed arguments. Error handler is used to process errors when parsing arguments. If not set the default handler is used.

Definition at line 2189 of file ncbiargs.cpp.

References CArgDescriptions::AddFlag(), kEmptyStr, CArgDescriptions::m_ArgGroups, CArgDescriptions::m_AutoHelp, CArgDescriptions::m_ErrorHandler, CRef< C, Locker >::Reset(), s_AutoHelp, s_AutoHelpFull, s_AutoHelpShowAll, s_AutoHelpXml, and CArgDescriptions::SetUsageContext().

CArgs() [1/2]

CArgs::CArgs

(

const CArgs &

other

)

Creating copy of this object usually makes no sense if it is really required, please use Assign method.

Definition at line 1760 of file ncbiargs.cpp.

References CArgs::Assign().

CArgs() [2/2]

CArgs::CArgs

(

void

)

Constructor.

Definition at line 1749 of file ncbiargs.cpp.

References CArgs::m_nExtra.

CArgValue()

CArgValue::CArgValue ( const string &  name )

protected

Protected constructor and destructor.

Prohibit explicit instantiation of CArgValue with name.

Definition at line 151 of file ncbiargs.cpp.

References CArgValue::m_Name, NCBI_THROW, and CArgDescriptions::VerifyName().

CCommandArgDescriptions()

CCommandArgDescriptions::CCommandArgDescriptions	(	bool	auto_help = true,
		CArgErrorHandler *	err_handler = 0,
		TCommandArgFlags	cmd_flags = eCommandMandatory
	)

Constructor.

If "auto_help" is passed TRUE, then a special flag "-h" will be added to the list of accepted arguments. Passing "-h" in the command line will printout USAGE and ignore all other passed arguments. Error handler is used to process errors when parsing arguments. If not set the default handler is used.

Definition at line 3979 of file ncbiargs.cpp.

Clone() [1/8]

CArgAllow * CArgAllow::Clone ( void  ) const

virtual

Create object's clone, moving it from stack memory into heap.

The method is required only when using objects created on stack.

NOTE: Default implementation returns NULL. Inherited classes must override this method.

See also

CArgDescriptions::SetConstraint

Reimplemented in CArgAllow_Regexp, CArgAllow_Doubles, CArgAllow_Integers, CArgAllow_Int8s, CArgAllow_Strings, CArgAllow_String, and CArgAllow_Symbols.

Definition at line 4350 of file ncbiargs.cpp.

References NULL.

Referenced by CArgDescriptions::SetConstraint().

Clone() [2/8]

CArgAllow * CArgAllow_Symbols::Clone ( void  ) const

protectedvirtual

Create object's clone, moving it from stack memory into heap.

The method is required only when using objects created on stack.

NOTE: Default implementation returns NULL. Inherited classes must override this method.

See also

CArgDescriptions::SetConstraint

Reimplemented from CArgAllow.

Reimplemented in CArgAllow_String.

Definition at line 4501 of file ncbiargs.cpp.

References CArgAllow_Symbols::CArgAllow_Symbols(), and CArgAllow_Symbols::m_SymClass.

Clone() [3/8]

CArgAllow * CArgAllow_String::Clone ( void  ) const

protectedvirtual

Create object's clone, moving it from stack memory into heap.

The method is required only when using objects created on stack.

NOTE: Default implementation returns NULL. Inherited classes must override this method.

See also

CArgDescriptions::SetConstraint

Reimplemented from CArgAllow_Symbols.

Definition at line 4571 of file ncbiargs.cpp.

References CArgAllow_String::CArgAllow_String(), and CArgAllow_Symbols::m_SymClass.

Clone() [4/8]

CArgAllow * CArgAllow_Strings::Clone ( void  ) const

protectedvirtual

Create object's clone, moving it from stack memory into heap.

The method is required only when using objects created on stack.

NOTE: Default implementation returns NULL. Inherited classes must override this method.

See also

CArgDescriptions::SetConstraint

Reimplemented from CArgAllow.

Definition at line 4661 of file ncbiargs.cpp.

References CArgAllow_Strings::CArgAllow_Strings(), and CArgAllow_Strings::m_Strings.

Clone() [5/8]

CArgAllow * CArgAllow_Int8s::Clone ( void  ) const

protectedvirtual

Create object's clone, moving it from stack memory into heap.

The method is required only when using objects created on stack.

NOTE: Default implementation returns NULL. Inherited classes must override this method.

See also

CArgDescriptions::SetConstraint

Reimplemented from CArgAllow.

Reimplemented in CArgAllow_Integers.

Definition at line 4755 of file ncbiargs.cpp.

References CArgAllow_Int8s::CArgAllow_Int8s(), and CArgAllow_Int8s::m_MinMax.

Clone() [6/8]

CArgAllow * CArgAllow_Integers::Clone ( void  ) const

protectedvirtual

Create object's clone, moving it from stack memory into heap.

The method is required only when using objects created on stack.

NOTE: Default implementation returns NULL. Inherited classes must override this method.

See also

CArgDescriptions::SetConstraint

Reimplemented from CArgAllow_Int8s.

Definition at line 4796 of file ncbiargs.cpp.

References CArgAllow_Integers::CArgAllow_Integers(), and CArgAllow_Int8s::m_MinMax.

Clone() [7/8]

CArgAllow * CArgAllow_Doubles::Clone ( void  ) const

protectedvirtual

Create object's clone, moving it from stack memory into heap.

The method is required only when using objects created on stack.

NOTE: Default implementation returns NULL. Inherited classes must override this method.

See also

CArgDescriptions::SetConstraint

Reimplemented from CArgAllow.

Definition at line 4886 of file ncbiargs.cpp.

References CArgAllow_Doubles::CArgAllow_Doubles(), and CArgAllow_Doubles::m_MinMax.

Clone() [8/8]

CArgAllow * CArgAllow_Regexp::Clone ( void  ) const

virtual

Create object's clone, moving it from stack memory into heap.

The method is required only when using objects created on stack.

NOTE: Default implementation returns NULL. Inherited classes must override this method.

See also

CArgDescriptions::SetConstraint

Reimplemented from CArgAllow.

Definition at line 80 of file arg_regexp.cpp.

References CArgAllow_Regexp::CArgAllow_Regexp(), and CArgAllow_Regexp::m_Pattern.

CloseFile()

virtual void CArgValue::CloseFile ( void  ) const

pure virtual

Close the file.

Implemented in CArg_Ios, CArg_String, CArg_ExcludedValue, and CArg_NoValue.

ConvertKeys()

template<class T >

void CArgDescriptions::ConvertKeys ( CArgs *  args, const T &  arg_map, bool  update  ) const

inline

Convert argument map (key-value pairs) into arguments in accordance with the argument descriptions.

Definition at line 1320 of file ncbiargs.hpp.

References CArgDescriptions::eConvertKeys, ITERATE, CArgDescriptions::m_KeyFlagArgs, CArgValue::SetStringList(), CArgDescriptions::x_CreateArg(), CArgDescriptions::x_IsMultiArg(), CArgDescriptions::x_PostCheck(), and CArgDescriptions::x_PreCheck().

Referenced by CCgiApplication::InitArgs().

CPrintUsage()

CArgDescriptions::CPrintUsage::CPrintUsage

(

const CArgDescriptions &

desc

)

Definition at line 3555 of file ncbiargs.cpp.

References _ASSERT, set< Key, Compare >::begin(), set< Key, Compare >::end(), CArgDescriptions::fHidden, CArgDescriptions::fUsageSortArgs, CArgDesc::GetName(), CArgDescriptions::IsSetMiscFlag(), kEmptyStr, CArgDescriptions::m_Args, CArgDescriptions::CPrintUsage::m_args, CArgDescriptions::m_AutoHelp, CArgDescriptions::m_HasHidden, CArgDescriptions::m_KeyFlagArgs, CArgDescriptions::m_OpeningArgs, CArgDescriptions::m_PosArgs, s_AutoHelp, s_AutoHelpFull, s_AutoHelpShowAll, util::strcmp(), and CArgDescriptions::x_Find().

CPrintUsageXml()

CArgDescriptions::CPrintUsageXml::CPrintUsageXml	(	const CArgDescriptions &	desc,
		CNcbiOstream &	out
	)

Definition at line 3841 of file ncbiargs.cpp.

References CArgDescriptions::eCgiArgs, CArgDescriptions::eRegularArgs, CArgDescriptions::GetArgsType(), CNcbiApplication::Instance(), CArgDescriptions::m_DetailedDescription, CArgDescriptions::CPrintUsageXml::m_out, CArgDescriptions::m_UsageDescription, CArgDescriptions::m_UsageName, Print(), and s_WriteXmlLine().

Create()

CRef< CArgDependencyGroup > CArgDependencyGroup::Create ( const string &  name, const string &  description = kEmptyStr  )

static

Create new dependency group.

Parameters

name	Name of the group
description	User-provided description of the dependency group (for Usage). A generated description will be added to it.

Definition at line 4896 of file ncbiargs.cpp.

References CArgDependencyGroup::CArgDependencyGroup().

CreateArgs() [1/3]

CArgs * CArgDescriptions::CreateArgs ( const CNcbiArguments &  argv ) const

virtual

Parse command-line arguments 'argv' out of CNcbiArguments.

Reimplemented in CCommandArgDescriptions.

Definition at line 2833 of file ncbiargs.cpp.

References CArgDescriptions::CreateArgs(), kEmptyStr, CArgDescriptions::SetCurrentGroup(), and CNcbiArguments::Size().

CreateArgs() [2/3]

CArgs * CCommandArgDescriptions::CreateArgs ( const CNcbiArguments &  argv ) const

virtual

Parse command-line arguments 'argv'.

Reimplemented from CArgDescriptions.

Definition at line 4092 of file ncbiargs.cpp.

References command, CArgDescriptions::CreateArgs(), map_checker< Container >::empty(), ctll::empty(), map_checker< Container >::end(), map_checker< Container >::find(), kEmptyStr, CCommandArgDescriptions::m_Command, CCommandArgDescriptions::m_Description, NCBI_THROW, CArgs::SetCommand(), CNcbiArguments::Shift(), CNcbiArguments::Size(), CArgDescriptions::x_CheckAutoHelp(), CCommandArgDescriptions::x_IdentifyCommand(), and CCommandArgDescriptions::x_IsCommandMandatory().

CreateArgs() [3/3]

template<class TSize , class TArray >

CArgs* CArgDescriptions::CreateArgs ( TSize  argc, TArray  argv  ) const

inline

Create parsed arguments in CArgs object.

Parse command-line arguments, and create "CArgs" args object from the passed command-line arguments "argc" and "argv".

Throw

• CArgException on error
• CArgHelpException if USAGE printout was requested ("-h" flag)

Note

Deallocate the resulting "CArgs" object using 'delete'.

Attention

This function is not suitable for parsing URL-encoded _CGI_ arg outside of the CCgiApplication framework.

Definition at line 1279 of file ncbiargs.hpp.

References CArgDescriptions::eCgiArgs, CArgDescriptions::eCreateArgs, CArgDescriptions::GetArgsType(), i, kEmptyStr, kMax_UInt, CArgDescriptions::x_CheckAutoHelp(), CArgDescriptions::x_CreateArg(), CArgDescriptions::x_PostCheck(), and CArgDescriptions::x_PreCheck().

Referenced by CArgDescriptions::CreateArgs(), CCommandArgDescriptions::CreateArgs(), CBlastArgs::s_CreateBlastOptions(), and CNcbiApplicationAPI::SetupArgDescriptions().

DECLARE_OPERATOR_BOOL()

CArgValue::DECLARE_OPERATOR_BOOL

(

HasValue()

)

Synonym for HasValue().

Delete()

void CArgDescriptions::Delete

(

const string &

name

)

Delete description of argument with name "name".

Extra arguments get deleted by the name passed as "".

Throw the CArgException (eSynopsis error code) exception if the specified name cannot be found.

Definition at line 2660 of file ncbiargs.cpp.

References _ASSERT, set< Key, Compare >::end(), set< Key, Compare >::erase(), CArgDescriptions::m_Args, CArgDescriptions::m_AutoHelp, CArgDescriptions::m_KeyFlagArgs, CArgDescriptions::m_nExtra, CArgDescriptions::m_nExtraOpt, CArgDescriptions::m_PosArgs, NCBI_THROW, s_AutoHelp, and CArgDescriptions::x_Find().

Referenced by CCommandArgDescriptions::AddCommand(), and CArgDescriptions::AddStdArguments().

Evaluate()

void CArgDependencyGroup::Evaluate

(

const CArgs &

args

)

const

Definition at line 4939 of file ncbiargs.cpp.

References CArgDependencyGroup::x_Evaluate().

Exist() [1/2]

bool CArgs::Exist

(

const string &

name

)

const

Check existence of argument description.

Return TRUE if arg "name" was described in the parent CArgDescriptions.

NOTE: Do not confuse this method with CArgValue::HasValue() which checks if the argument not just exists, but was assigned a value (possibly the default one).

Definition at line 1813 of file ncbiargs.cpp.

References set< Key, Compare >::end(), CArgs::m_Args, and CArgs::x_Find().

Referenced by BuildAlgorithmParametersString(), CGenomicCollectionsService::CGenomicCollectionsService(), CBlastDBAliasApp::ConvertGiFile(), CBlastDBAliasApp::CreateAliasFile(), CWinMaskConfig::CWinMaskConfig(), CMapperMTArgs::ExtractAlgorithmOptions(), CMapperQueryOptionsArgs::ExtractAlgorithmOptions(), CMapperFormattingArgs::ExtractAlgorithmOptions(), CBlastDatabaseArgs::ExtractAlgorithmOptions(), CFormattingArgs::ExtractAlgorithmOptions(), CMbIndexArgs::ExtractAlgorithmOptions(), CStdCmdLineArgs::ExtractAlgorithmOptions(), CGenericSearchArgs::ExtractAlgorithmOptions(), CFilteringArgs::ExtractAlgorithmOptions(), CNuclArgs::ExtractAlgorithmOptions(), CCompositionBasedStatsArgs::ExtractAlgorithmOptions(), CPssmEngineArgs::ExtractAlgorithmOptions(), CPsiBlastArgs::ExtractAlgorithmOptions(), CPhiBlastArgs::ExtractAlgorithmOptions(), CKBlastpArgs::ExtractAlgorithmOptions(), CDeltaBlastArgs::ExtractAlgorithmOptions(), CMappingArgs::ExtractAlgorithmOptions(), CQueryOptionsArgs::ExtractAlgorithmOptions(), CIgBlastArgs::ExtractAlgorithmOptions(), CRemoteArgs::ExtractAlgorithmOptions(), NParamsBuilder::SOneRequest::GetDataOnlyEnabled(), NParamsBuilder::SOneRequest::GetDataOnlyOutputFormat(), CSearchStrategyArgs::GetExportStream(), CSearchStrategyArgs::GetImportStream(), GetSubjectFile(), CBlastDatabaseArgs::HasBeenSet(), CMbIndexArgs::HasBeenSet(), RecoverSearchStrategy(), CBlastnApp::Run(), CBlastpApp::Run(), CBlastxApp::Run(), CSeedTopApp::Run(), CTblastnApp::Run(), CIgBlastnApp::Run(), CNcbiApplogApp::Run(), CTbl2AsnApp::Run(), BlastdbCopyApplication::Run(), CVDBBlastnApp::Run(), CVDBTblastnApp::Run(), CClientGenomicCollectionsSvcApplication::Run(), CSampleBasicApplication::Run(), CBlastAppArgs::SetOptions(), CBlastnAppArgs::x_CreateOptionsHandle(), CBlastpAppArgs::x_CreateOptionsHandle(), CBlastxAppArgs::x_CreateOptionsHandle(), CPsiBlastAppArgs::x_CreateOptionsHandle(), CTblastnAppArgs::x_CreateOptionsHandle(), CTblastnVdbAppArgs::x_CreateOptionsHandle(), CArgDependencyGroup::x_Evaluate(), CMTArgs::x_ExtractAlgorithmOptions(), CMakeProfileDBApp::x_InitProgramParameters(), CArgDescriptions::x_PostCheck(), CDataLoadersUtil::x_SetupASNCacheDataLoader(), CDataLoadersUtil::x_SetupBlastDataLoader(), CDataLoadersUtil::x_SetupGenbankDataLoader(), CDataLoadersUtil::x_SetupLDS2DataLoader(), CDataLoadersUtil::x_SetupSRADataLoader(), and CDataLoadersUtil::x_SetupVDBDataLoader().

Exist() [2/2]

bool CArgDescriptions::Exist

(

const string &

name

)

const

Check if there is already an argument description with specified name.

Definition at line 2654 of file ncbiargs.cpp.

References set< Key, Compare >::end(), CArgDescriptions::m_Args, and CArgDescriptions::x_Find().

Referenced by CCommandArgDescriptions::AddCommand(), CArgDescriptions::AddDefaultFileArguments(), CArgDescriptions::AddStdArguments(), CProSplignOptions_Base::SetupArgDescriptions(), and CArgDescriptions::x_AddDesc().

GetAll()

vector< CRef< CArgValue > > CArgs::GetAll

(

void

)

const

Get all available arguments.

Definition at line 1864 of file ncbiargs.cpp.

References a, ITERATE, and CArgs::m_Args.

Referenced by CJniUtil::GetArgsFromNcbiApp(), CArgDescriptions::x_CreateArg(), and CBlastAppArgs::x_IssueWarningsForIgnoredOptions().

GetAllDescriptions() [1/2]

virtual list<CArgDescriptions*> CArgDescriptions::GetAllDescriptions ( void  )

inlinevirtual

Reimplemented in CCommandArgDescriptions.

Definition at line 1361 of file ncbiargs.hpp.

Referenced by CCommandArgDescriptions::GetAllDescriptions(), and CArgDescriptions::ShowAllArguments().

GetAllDescriptions() [2/2]

list< CArgDescriptions * > CCommandArgDescriptions::GetAllDescriptions ( void  )

virtual

Reimplemented from CArgDescriptions.

Definition at line 4318 of file ncbiargs.cpp.

References all, map_checker< Container >::begin(), map_checker< Container >::end(), CArgDescriptions::GetAllDescriptions(), and CCommandArgDescriptions::m_Description.

GetArgsType()

EArgSetType CArgDescriptions::GetArgsType ( ) const

inline

Definition at line 569 of file ncbiargs.hpp.

References CArgDescriptions::m_ArgsType.

Referenced by CArgDescriptions::CPrintUsageXml::CPrintUsageXml(), CArgDescriptions::CreateArgs(), and CArgDescriptions::x_PostCheck().

GetCommand()

string CArgs::GetCommand ( void  ) const

inline

Get current command.

See also

CCommandArgDescriptions

Definition at line 465 of file ncbiargs.hpp.

References CArgs::m_Command.

Referenced by CNcbiApplogApp::Redirect(), CNcbiApplogApp::Run(), and CClientGenomicCollectionsSvcApplication::RunWithService().

GetComment()

const string& CArgDesc::GetComment ( void  ) const

inline

Get argument description.

Definition at line 1840 of file ncbiargs.hpp.

References CArgDesc::m_Comment.

Referenced by CArgDesc::PrintXml(), and CArgDescriptions::x_PrintComment().

GetConstraint()

const CArgAllow * CArgDesc::GetConstraint ( void  ) const

virtual

Get argument constraint.

Reimplemented in CArgDescMandatory.

Definition at line 957 of file ncbiargs.cpp.

Referenced by CArgDesc::GetUsageConstraint(), and CArgDesc::PrintXml().

GetDefault()

const string & CArgValue::GetDefault

(

TArgValueFlags *

flags = NULL

)

const

Get default value of the argument.

Parameters

flags

Indicate whether the argument has default value, and if the arg's value was set from the command line or from the default value.

Returns

Default value, if specified for this argument. If the argument doesn't have a default value: empty string. If the argument is a flag: "false" or "true".

Definition at line 173 of file ncbiargs.cpp.

References CArgValue::m_Default, and CArgValue::m_Flags.

GetErrCodeString() [1/2]

const char * CArgException::GetErrCodeString ( void  ) const

overridevirtual

Translate from the error code value to its string representation.

Reimplemented from CCoreException.

Reimplemented in CArgHelpException.

Definition at line 5126 of file ncbiargs.cpp.

References CArgException::eArgType, CArgException::eConstraint, CArgException::eConvert, CArgException::eExcludedValue, CArgException::eInvalidArg, CArgException::eNoArg, CArgException::eNoFile, CArgException::eNoValue, CArgException::eSynopsis, CArgException::eWrongCast, CCoreException::GetErrCode(), and CException::GetErrCodeString().

GetErrCodeString() [2/2]

const char * CArgHelpException::GetErrCodeString ( void  ) const

overridevirtual

Translate from the error code value to its string representation.

Reimplemented from CArgException.

Definition at line 5143 of file ncbiargs.cpp.

References CArgHelpException::eHelp, CArgHelpException::eHelpErr, CArgHelpException::eHelpFull, CArgHelpException::eHelpShowAll, CArgHelpException::eHelpXml, CCoreException::GetErrCode(), and CException::GetErrCodeString().

GetErrorHandler()

virtual const CArgErrorHandler* CArgDesc::GetErrorHandler ( void  ) const

inlinevirtual

Get error handler for the argument.

Reimplemented in CArgDescMandatory.

Definition at line 1883 of file ncbiargs.hpp.

GetFlags()

CArgDescriptions::TFlags CArgDesc::GetFlags ( void  ) const

inline

Get argument flags.

Definition at line 1888 of file ncbiargs.hpp.

References CArgDesc::m_Flags.

Referenced by CArgDesc::GetUsageConstraint(), CArgDesc_Key::GetUsageSynopsis(), CArgDesc_KeyOpt::GetUsageSynopsis(), CArgDesc_KeyDef::GetUsageSynopsis(), CArgErrorHandler::HandleError(), CArgDesc::PrintXml(), CArgDescMandatory::ProcessArgument(), CArgDescriptions::x_AddDesc(), CArgDescriptions::x_IsMultiArg(), and CArgDescriptions::x_PrintComment().

GetGroup()

virtual size_t CArgDesc::GetGroup ( void  ) const

inlinevirtual

Get argument group.

Reimplemented in CArgDesc_Flag, and CArgDescOptional.

Definition at line 1843 of file ncbiargs.hpp.

Referenced by CArgDesc::PrintXml().

GetName() [1/2]

const string& CArgValue::GetName ( void  ) const

inline

Get argument name.

Definition at line 187 of file ncbiargs.hpp.

References CArgValue::m_Name.

Referenced by CArgs::Add(), CArg_String::AsBoolean(), CArg_String::AsDateTime(), CArg_String::AsDirectory(), CArg_String::AsDouble(), CArg_String::AsInputFile(), CArg_String::AsInt8(), CArg_String::AsInteger(), CArg_IntId::AsInteger(), CArg_String::AsIntId(), CArg_Int8::AsIntId(), CArg_String::AsIOFile(), CArg_String::AsOutputFile(), CArg_Boolean::CArg_Boolean(), CArg_DataSize::CArg_DataSize(), CArg_DateTime::CArg_DateTime(), CArg_Double::CArg_Double(), CArg_Int8::CArg_Int8(), CArg_Integer::CArg_Integer(), CArg_IntId::CArg_IntId(), CArg_String::CloseFile(), CArg_Ios::CloseFile(), operator<(), and CArg_Ios::x_Open().

GetName() [2/2]

const string& CArgDesc::GetName ( void  ) const

inline

Get argument name.

Definition at line 1837 of file ncbiargs.hpp.

References CArgDesc::m_Name.

Referenced by CArgDescMandatory::CArgDescMandatory(), CArgDescriptions::CPrintUsage::CPrintUsage(), CArgDesc_Flag::GetUsageSynopsis(), CArgDesc_Pos::GetUsageSynopsis(), CArgDesc_Opening::GetUsageSynopsis(), CArgDesc_Key::GetUsageSynopsis(), CArgDesc_KeyOpt::GetUsageSynopsis(), CArgDesc_KeyDef::GetUsageSynopsis(), CArgErrorHandler::HandleError(), operator<(), CArgDesc::PrintXml(), CArgDescMandatory::ProcessArgument(), CArgDesc_Flag::ProcessArgument(), CArgDesc_Alias::ProcessArgument(), CArgDescMandatory::ProcessDefault(), CArgDescOptional::ProcessDefault(), CArgDesc_Flag::ProcessDefault(), CArgDesc_Alias::ProcessDefault(), CArgDesc::SetConstraint(), CArgDescriptions::x_AddDesc(), CArgDescriptions::x_PostCheck(), CArgDescriptions::x_PreCheck(), CArgDescriptions::x_PrintAliasesAsXml(), and CArgDescriptions::x_PrintComment().

GetNExtra()

size_t CArgs::GetNExtra ( void  ) const

inline

Get the number of unnamed positional (a.k.a. extra) args.

Definition at line 422 of file ncbiargs.hpp.

References CArgs::m_nExtra.

Referenced by CIdMapperApp::GetSourceIds(), COMSSAMerge::Run(), CDemoSeqQaApp::Run(), CCpGDemoApp::Run(), CAgpValidateApplication::Run(), CAgpconvertApplication::Run(), CMultipatternApp::Run(), CPsgPerfApplication::Run(), CRunTestApplication::Run(), CTestApplication::Run(), CSampleBasicApplication::Run(), CGapStatsApplication::RunNoCatch(), and CAgpValidateApplication::x_ValidateUsingFiles().

GetOrdinalPosition()

size_t CArgValue::GetOrdinalPosition ( void  ) const

inline

Get ordinal position of the value.

NOTE: this is not the position in command line, rather this reflects the order in which values were added to the list.

Definition at line 304 of file ncbiargs.hpp.

References CArgValue::m_Ordinal.

GetPositionalMode()

EArgPositionalMode CArgDescriptions::GetPositionalMode ( ) const

inline

Definition at line 585 of file ncbiargs.hpp.

References CArgDescriptions::m_PositionalMode.

Referenced by CArgDescriptions::CPrintUsageXml::PrintArguments().

GetStringList()

const CArgValue::TStringArray & CArgValue::GetStringList ( ) const

virtual

Get the value list.

Reimplemented in CArg_String.

Definition at line 211 of file ncbiargs.cpp.

References THROW_CArg_NoValue.

Referenced by CArgs::Print().

GetTypeName()

const char * CArgDescriptions::GetTypeName ( EType  type )

static

Get argument type's name.

Definition at line 2385 of file ncbiargs.cpp.

References _TROUBLE, int, CArgDescriptions::k_EType_Size, and NCBI_THROW.

Referenced by CArgDescMandatory::CArgDescMandatory(), CArgDescMandatory::GetUsageCommentAttr(), CArgDesc::PrintXml(), and CArgDescriptions::x_PrintComment().

GetUsage() [1/8]

string CArgAllow_Symbols::GetUsage ( void  ) const

protectedvirtual

Get usage information.

Implements CArgAllow.

Reimplemented in CArgAllow_String.

Definition at line 4459 of file ncbiargs.cpp.

References ITERATE, CArgAllow_Symbols::m_SymClass, pi, s_GetUsageSymbol(), and usage.

GetUsage() [2/8]

string CArgAllow_String::GetUsage ( void  ) const

protectedvirtual

Get usage information.

Reimplemented from CArgAllow_Symbols.

Definition at line 4544 of file ncbiargs.cpp.

References ITERATE, CArgAllow_Symbols::m_SymClass, pi, s_GetUsageSymbol(), and usage.

GetUsage() [3/8]

string CArgAllow_Strings::GetUsage ( void  ) const

protectedvirtual

Get usage information.

Implements CArgAllow.

Definition at line 4613 of file ncbiargs.cpp.

References set< Key, Compare >::begin(), set< Key, Compare >::empty(), set< Key, Compare >::end(), CArgAllow_Strings::m_Strings, and str().

GetUsage() [4/8]

string CArgAllow_Int8s::GetUsage ( void  ) const

protectedvirtual

Get usage information.

Implements CArgAllow.

Reimplemented in CArgAllow_Integers.

Definition at line 4698 of file ncbiargs.cpp.

References set< Key, Compare >::begin(), NStr::Int8ToString(), ITERATE, kEmptyStr, kMax_I8, kMin_I8, CArgAllow_Int8s::m_MinMax, pi, set< Key, Compare >::size(), string, and usage.

Referenced by CArgAllow_Integers::GetUsage().

GetUsage() [5/8]

string CArgAllow_Integers::GetUsage ( void  ) const

protectedvirtual

Get usage information.

Reimplemented from CArgAllow_Int8s.

Definition at line 4778 of file ncbiargs.cpp.

References set< Key, Compare >::begin(), CArgAllow_Int8s::GetUsage(), NStr::Int8ToString(), kEmptyStr, kMax_Int, kMin_Int, CArgAllow_Int8s::m_MinMax, set< Key, Compare >::size(), and string.

GetUsage() [6/8]

string CArgAllow_Doubles::GetUsage ( void  ) const

protectedvirtual

Get usage information.

Implements CArgAllow.

Definition at line 4833 of file ncbiargs.cpp.

References set< Key, Compare >::begin(), NStr::DoubleToString(), ITERATE, kEmptyStr, kMax_Double, kMin_Double, CArgAllow_Doubles::m_MinMax, pi, set< Key, Compare >::size(), string, and usage.

GetUsage() [7/8]

string CArgAllow_Regexp::GetUsage ( void  ) const

virtual

Get usage information.

Implements CArgAllow.

Definition at line 66 of file arg_regexp.cpp.

References CArgAllow_Regexp::m_Pattern.

GetUsage() [8/8]

virtual string CArgAllow::GetUsage ( void  ) const

pure virtual

Get usage information.

Implemented in CArgAllowGeneticCodeInteger, CArgAllow_Regexp, CArgAllow_Doubles, CArgAllow_Integers, CArgAllow_Int8s, CArgAllow_Strings, CArgAllow_String, CArgAllow_Symbols, CArgAllowStringSet, CArgAllowIntegerSet, CArgAllowValuesBetween, CArgAllowValuesLessThanOrEqual, CArgAllowValuesGreaterThanOrEqual, and CArgAllowMaximumFileNameLength.

Referenced by CArgDesc::GetUsageConstraint(), CArgDescMandatory::ProcessArgument(), and CArgDesc::SetConstraint().

GetUsageCommentAttr()

virtual string CArgDesc::GetUsageCommentAttr ( void  ) const

pure virtual

Get usage comment attribute.

Implemented in CArgDesc_Alias, CArgDesc_Flag, CArgDescMandatory, and CArgDesc_NameOnly.

Referenced by CArgDescriptions::x_PrintComment().

GetUsageConstraint()

string CArgDesc::GetUsageConstraint

(

void

)

const

Get usage constraint.

Definition at line 963 of file ncbiargs.cpp.

References CArgDescriptions::fConfidential, CArgDesc::GetConstraint(), CArgDesc::GetFlags(), CArgAllow::GetUsage(), CArgDesc::IsConstraintInverted(), kEmptyStr, and usage.

Referenced by CArgDescMandatory::GetUsageCommentAttr(), and CArgDesc::PrintXml().

GetUsageSynopsis()

virtual string CArgDesc::GetUsageSynopsis ( bool  name_only = false ) const

pure virtual

Get usage synopsis.

Implemented in CArgDesc_NameOnly, CArgDescMandatory, CArgDesc_KeyDef, CArgDesc_KeyOpt, CArgDesc_Key, CArgDesc_Opening, CArgDesc_Pos, CArgDesc_Flag, and CArgDesc_Alias.

Referenced by CArgDescriptions::x_PrintComment().

HandleError()

CArgValue * CArgErrorHandler::HandleError ( const CArgDesc &  arg_desc, const string &  value  ) const

virtual

Process invalid argument value.

The base implementation returns NULL or throws exception depending on the CArgDesc flags.

Parameters

arg_desc	CArgDesc object which failed to initialize.
value	String value which caused the error.

Returns

Return new CArgValue object or NULL if the argument should be ignored (as if it has not been set in the command line).

Definition at line 2166 of file ncbiargs.cpp.

References ERR_POST_X, CArgDescriptions::fIgnoreInvalidValue, CArgDescriptions::fWarnOnInvalidValue, CArgDesc::GetFlags(), CArgDesc::GetName(), CArgDesc::ProcessArgument(), rapidjson::value, and Warning().

HasValue()

virtual bool CArgValue::HasValue ( void  ) const

pure virtual

Check if argument holds a value.

Argument does not hold value if it was described as optional argument without default value, and if it was not passed a value in the command line. On attempt to retrieve the value from such "no-value" argument, exception will be thrown.

NOTE: HasValue() and operator bool() check if the argument has any value, they do not return the actual value of boolean arguments. if (args["bv"]) ... - check if "bv" has any value if (args["bv"].AsBoolean()) ... - check the actual value of "bv" argument

Implemented in CArg_Flag, CArg_String, CArg_ExcludedValue, and CArg_NoValue.

Referenced by CCodeGenerator::GetOpt(), and CMakeBlastDBApp::x_ProcessMaskData().

IsAutoHelpEnabled()

bool CArgDescriptions::IsAutoHelpEnabled ( void  ) const

inline

See if special flag "-h" is activated.

Definition at line 1099 of file ncbiargs.hpp.

References CArgDescriptions::m_AutoHelp.

IsConstraintInverted()

virtual bool CArgDesc::IsConstraintInverted ( ) const

inlinevirtual

Returns TRUE if associated constraint is inverted (NOT)

See also

SetConstraint

Reimplemented in CArgDescMandatory.

Definition at line 1874 of file ncbiargs.hpp.

Referenced by CArgDesc::GetUsageConstraint(), and CArgDesc::PrintXml().

IsEmpty()

bool CArgs::IsEmpty

(

void

)

const

Check if there are no arguments in this container.

Definition at line 1955 of file ncbiargs.cpp.

References set< Key, Compare >::empty(), and CArgs::m_Args.

Referenced by CArgDescriptions::x_PostCheck().

IsSetMiscFlag()

bool CArgDescriptions::IsSetMiscFlag ( EMiscFlags  flag ) const

inline

Check if the flag is set.

Definition at line 1051 of file ncbiargs.hpp.

References CArgDescriptions::m_MiscFlags.

Referenced by CArgDescriptions::CPrintUsage::CPrintUsage(), and CArgDescriptions::x_PostCheck().

NCBI_EXCEPTION_DEFAULT() [1/2]

CArgException::NCBI_EXCEPTION_DEFAULT	(	CArgException	,
		CCoreException
	)

NCBI_EXCEPTION_DEFAULT() [2/2]

CArgHelpException::NCBI_EXCEPTION_DEFAULT	(	CArgHelpException	,
		CArgException
	)

operator,()

CArgAllow_Strings& CArgAllow_Strings::operator, ( const string &  value )

inline

Short notation operator for adding allowed string values.

Parameters

value

String to add to the set of allowed string values

See also

Allow()

Definition at line 1670 of file ncbiargs.hpp.

References CArgAllow_Strings::AllowValue(), and rapidjson::value.

operator<()

bool operator< ( const CRef< CArgValue > &  x, const CRef< CArgValue > &  y  )

inline

Definition at line 356 of file ncbiargs.hpp.

References CArgValue::GetName().

operator=() [1/2]

CArgDependencyGroup& CArgDependencyGroup::operator= ( const CArgDependencyGroup &  )

private

operator=() [2/2]

CArgs & CArgs::operator=

(

const CArgs &

other

)

Creating copy of this object usually makes no sense if it is really required, please use Assign method.

Definition at line 1765 of file ncbiargs.cpp.

References CArgs::Assign().

operator[]() [1/2]

const CArgValue & CArgs::operator[]

(

const string &

name

)

const

Get value of argument by name.

If the name starts with '-' (e.g. '-arg') the argument can also be found by 'arg' name if there is no another argument named 'arg'.

Throw an exception if such argument does not exist (not described in the CArgDescriptions).

Attention

CArgValue::operator bool() can return TRUE even if the argument was not specified in the command-line – if the argument has a default value.

See also

Exist() above.

Definition at line 1819 of file ncbiargs.cpp.

References set< Key, Compare >::end(), kMax_UInt, CArgs::m_Args, CArgs::m_nExtra, NCBI_THROW, s_ComposeNameExtra(), NStr::StringToUInt(), and CArgs::x_Find().

operator[]() [2/2]

const CArgValue & CArgs::operator[]

(

size_t

idx

)

const

Return N-th extra arg value, N = 1 to GetNExtra().

Definition at line 1859 of file ncbiargs.cpp.

References s_ComposeNameExtra().

Print()

string & CArgs::Print

(

string &

str

)

const

Print (append) all arguments to the string "str" and return "str".

Definition at line 1876 of file ncbiargs.cpp.

References CArgValue::AsString(), set< Key, Compare >::begin(), set< Key, Compare >::end(), CArgValue::GetStringList(), NStr::Join(), CArgs::m_Args, str(), and tmp.

Referenced by CXcompareAnnotsApplication::Run(), CReadBlastApp::Run(), and CSampleBasicApplication::Run().

PrintArguments()

void CArgDescriptions::CPrintUsageXml::PrintArguments

(

const CArgDescriptions &

desc

)

const

Definition at line 3870 of file ncbiargs.cpp.

References a, CArgDescriptions::eExcludes, multimap_checker< Container >::empty(), CArgDescriptions::ePositionalMode_Loose, CArgDescriptions::eRequires, CArgDescriptions::GetPositionalMode(), i, ITERATE, CArgDescriptions::m_Args, CArgDescriptions::m_Dependencies, CArgDescriptions::m_nExtra, CArgDescriptions::m_nExtraOpt, CArgDescriptions::m_OpeningArgs, CArgDescriptions::m_PosArgs, s_IsFlag(), s_IsKey(), s_IsPositional(), s_WriteXmlLine(), tag, NStr::UIntToString(), and CArgDescriptions::x_PrintAliasesAsXml().

Referenced by CArgDescriptions::PrintUsageXml(), and CCommandArgDescriptions::PrintUsageXml().

PrintUsage() [1/3]

void CArgDependencyGroup::PrintUsage	(	list< string > &	arr,
		size_t	offset
	)		const

Definition at line 5014 of file ncbiargs.cpp.

References arr, map_checker< Container >::begin(), CArgDependencyGroup::eInstantSet, map_checker< Container >::end(), first(), i, NStr::Join(), kEmptyStr, CArgDependencyGroup::m_Arguments, CArgDependencyGroup::m_Description, CArgDependencyGroup::m_Groups, CArgDependencyGroup::m_MaxMembers, CArgDependencyGroup::m_MinMembers, CArgDependencyGroup::m_Name, NStr::NumericToString(), offset, and map_checker< Container >::size().

PrintUsage() [2/3]

string & CArgDescriptions::PrintUsage ( string &  str, bool  detailed = false  ) const

virtual

Print usage message to end of specified string.

Printout USAGE and append to the string "str" using provided argument descriptions and usage context.

Returns

Appended "str"

Reimplemented in CArgDesc_agp_validate, CDiscRepArgDescriptions, and CCommandArgDescriptions.

Definition at line 3815 of file ncbiargs.cpp.

References CArgDescriptions::CPrintUsage::AddDescription(), CArgDescriptions::CPrintUsage::AddDetails(), CArgDescriptions::CPrintUsage::AddSynopsis(), arr, NStr::Join(), kEmptyStr, CArgDescriptions::m_UsageName, and str().

Referenced by CCgiRequestProcessor::OnException(), CDiscRepArgDescriptions::PrintUsage(), CMakeScoreMethodApp::Run(), and CBlastArgs::s_CreateBlastOptions().

PrintUsage() [3/3]

string & CCommandArgDescriptions::PrintUsage ( string &  str, bool  detailed = false  ) const

virtual

Print usage message to end of specified string.

Printout USAGE and append to the string "str" using provided argument descriptions and usage context.

Returns

Appended "str"

Reimplemented from CArgDescriptions.

Definition at line 4134 of file ncbiargs.cpp.

References a, CArgDescriptions::CPrintUsage::AddCommandDescription(), CArgDescriptions::CPrintUsage::AddDescription(), CArgDescriptions::CPrintUsage::AddDetails(), CArgDescriptions::CPrintUsage::AddSynopsis(), arr, map_checker< Container >::begin(), cmd, map_checker< Container >::empty(), map_checker< Container >::end(), CCommandArgDescriptions::eNoSortCommands, CCommandArgDescriptions::eNoSortGroups, map_checker< Container >::find(), CNcbiApplicationAPI::GetArguments(), CNcbiApplication::Instance(), ITERATE, NStr::Join(), kEmptyStr, map_checker< Container >::lower_bound(), CCommandArgDescriptions::m_Aliases, CArgDescriptions::m_AutoHelp, CCommandArgDescriptions::m_Cmd_req, CCommandArgDescriptions::m_CmdGroups, CCommandArgDescriptions::m_Command, CCommandArgDescriptions::m_Commands, CCommandArgDescriptions::m_Description, CCommandArgDescriptions::m_Groups, CArgDescriptions::m_HasHidden, CArgDescriptions::m_UsageName, max(), NULL, map_checker< Container >::size(), CNcbiArguments::Size(), str(), t, CCommandArgDescriptions::x_GetCommandGroupIndex(), CCommandArgDescriptions::x_IdentifyCommand(), and CCommandArgDescriptions::x_IsCommandMandatory().

PrintUsageIfNoArgs()

void CArgDescriptions::PrintUsageIfNoArgs

(

bool

do_print = true

)

Print usage and exit.

Force to print USAGE unconditionally (and then exit) if no command-line args are present.

Deprecated:

Use SetMiscFlags(fUsageIfNoArgs) instead.

Definition at line 3410 of file ncbiargs.cpp.

References CArgDescriptions::fUsageIfNoArgs, CArgDescriptions::ResetMiscFlags(), and CArgDescriptions::SetMiscFlags().

PrintUsageXml() [1/10]

void CArgDescriptions::PrintUsageXml ( CNcbiOstream &  out ) const

virtual

Print argument description in XML format.

Parameters

out	Print into this output stream

Reimplemented in CCommandArgDescriptions.

Definition at line 3953 of file ncbiargs.cpp.

References out(), and CArgDescriptions::CPrintUsageXml::PrintArguments().

Referenced by CCgiRequestProcessor::ProcessHelpRequest().

PrintUsageXml() [2/10]

void CCommandArgDescriptions::PrintUsageXml ( CNcbiOstream &  out ) const

virtual

Print argument description in XML format.

Parameters

out	Print into this output stream

Reimplemented from CArgDescriptions.

Definition at line 4285 of file ncbiargs.cpp.

References map_checker< Container >::begin(), map_checker< Container >::end(), map_checker< Container >::find(), g(), CCommandArgDescriptions::m_Aliases, CCommandArgDescriptions::m_CmdGroups, CCommandArgDescriptions::m_Commands, CCommandArgDescriptions::m_Description, CCommandArgDescriptions::m_Groups, out(), CArgDescriptions::CPrintUsageXml::PrintArguments(), s_WriteXmlLine(), CCommandArgDescriptions::x_GetCommandGroupIndex(), and CCommandArgDescriptions::x_IsCommandMandatory().

PrintUsageXml() [3/10]

void CArgAllow::PrintUsageXml ( CNcbiOstream &  out ) const

virtual

Print constraints in XML format.

Reimplemented in CArgAllow_Regexp, CArgAllow_Doubles, CArgAllow_Int8s, CArgAllow_Strings, CArgAllow_String, and CArgAllow_Symbols.

Definition at line 4346 of file ncbiargs.cpp.

Referenced by CArgDesc::PrintXml().

PrintUsageXml() [4/10]

void CArgAllow_Symbols::PrintUsageXml ( CNcbiOstream &  out ) const

protectedvirtual

Print constraints in XML format.

Reimplemented from CArgAllow.

Reimplemented in CArgAllow_String.

Definition at line 4472 of file ncbiargs.cpp.

References CArgAllow_Symbols::eUser, ITERATE, CArgAllow_Symbols::m_SymClass, out(), pi, s_GetSymbolClass(), and s_WriteXmlLine().

PrintUsageXml() [5/10]

void CArgAllow_String::PrintUsageXml ( CNcbiOstream &  out ) const

protectedvirtual

Print constraints in XML format.

Reimplemented from CArgAllow_Symbols.

Definition at line 4558 of file ncbiargs.cpp.

References CArgAllow_Symbols::eUser, ITERATE, CArgAllow_Symbols::m_SymClass, out(), pi, s_GetSymbolClass(), and s_WriteXmlLine().

PrintUsageXml() [6/10]

void CArgAllow_Strings::PrintUsageXml ( CNcbiOstream &  out ) const

protectedvirtual

Print constraints in XML format.

Reimplemented from CArgAllow.

Definition at line 4639 of file ncbiargs.cpp.

References ITERATE, CArgAllow_Strings::m_Strings, out(), and s_WriteXmlLine().

PrintUsageXml() [7/10]

void CArgAllow_Int8s::PrintUsageXml ( CNcbiOstream &  out ) const

protectedvirtual

Print constraints in XML format.

Reimplemented from CArgAllow.

Definition at line 4729 of file ncbiargs.cpp.

References NStr::Int8ToString(), ITERATE, CArgAllow_Int8s::m_MinMax, out(), pi, s_WriteXmlLine(), and tag.

PrintUsageXml() [8/10]

void CArgAllow_Doubles::PrintUsageXml ( CNcbiOstream &  out ) const

protectedvirtual

Print constraints in XML format.

Reimplemented from CArgAllow.

Definition at line 4864 of file ncbiargs.cpp.

References NStr::DoubleToString(), ITERATE, CArgAllow_Doubles::m_MinMax, out(), pi, and s_WriteXmlLine().

PrintUsageXml() [9/10]

void CArgDependencyGroup::PrintUsageXml

(

CNcbiOstream &

out

)

const

Definition at line 5092 of file ncbiargs.cpp.

References map_checker< Container >::begin(), CArgDependencyGroup::eInstantSet, map_checker< Container >::end(), i, CArgDependencyGroup::m_Arguments, CArgDependencyGroup::m_Description, CArgDependencyGroup::m_Groups, CArgDependencyGroup::m_MaxMembers, CArgDependencyGroup::m_MinMembers, CArgDependencyGroup::m_Name, and out().

PrintUsageXml() [10/10]

void CArgAllow_Regexp::PrintUsageXml ( CNcbiOstream &  out ) const

virtual

Print constraints in XML format.

Reimplemented from CArgAllow.

Definition at line 72 of file arg_regexp.cpp.

References CArgAllow_Regexp::m_Pattern, and out().

PrintXml()

string CArgDesc::PrintXml

(

CNcbiOstream &

out

)

const

Print description in XML format.

Definition at line 988 of file ncbiargs.cpp.

References CUtf8::AsUTF8(), eEncoding_Unknown, CArgDescriptions::fAllowMultiple, CArgDescriptions::fAppend, CArgDescriptions::fBinary, CArgDescriptions::fConfidential, CArgDescriptions::fCreatePath, CArgDescriptions::fHidden, CArgDescriptions::fIgnoreInvalidValue, flags, CArgDescriptions::fMandatorySeparator, CArgDescriptions::fNoCreate, CArgDescriptions::fOptionalSeparator, CArgDescriptions::fOptionalSeparatorAllowConflict, CArgDescriptions::fPreOpen, CArgDescriptions::fTruncate, CArgDescriptions::fWarnOnInvalidValue, CArgDesc::GetComment(), CArgDesc::GetConstraint(), CArgDescDefault::GetDisplayValue(), CArgDesc::GetFlags(), CArgDesc::GetGroup(), CArgDesc::GetName(), CArgDesc_Flag::GetSetValue(), CArgDescSynopsis::GetSynopsis(), CArgDescMandatory::GetType(), CArgDescriptions::GetTypeName(), CArgDesc::GetUsageConstraint(), CArgDesc::IsConstraintInverted(), out(), CArgAllow::PrintUsageXml(), s_IsFlag(), s_IsKey(), s_IsOpening(), s_IsOptional(), s_IsPositional(), s_WriteEscapedStr(), s_WriteXmlLine(), and NStr::SizetToString().

ProcessArgument()

virtual CArgValue* CArgDesc::ProcessArgument ( const string &  value ) const

pure virtual

Process argument with specified value.

Implemented in CArgDesc_Alias, CArgDesc_Flag, CArgDescMandatory, and CArgDesc_NameOnly.

Referenced by CArgErrorHandler::HandleError().

ProcessDefault()

virtual CArgValue* CArgDesc::ProcessDefault ( void  ) const

pure virtual

Process argument default.

Implemented in CArgDesc_Alias, CArgDesc_Flag, CArgDescDefault, CArgDescOptional, CArgDescMandatory, and CArgDesc_NameOnly.

Referenced by CArgDescriptions::x_PostCheck().

Remove()

void CArgs::Remove

(

const string &

name

)

Remove argument of name "name".

Definition at line 1903 of file ncbiargs.cpp.

References set< Key, Compare >::erase(), set< Key, Compare >::find(), and CArgs::m_Args.

Referenced by CArgs::Add(), and CPsiBlastApp::x_RunLocalPsiBlastIterations().

Reset()

void CArgs::Reset

(

void

)

Remove all arguments.

Definition at line 1910 of file ncbiargs.cpp.

References set< Key, Compare >::clear(), CArgs::m_Args, and CArgs::m_nExtra.

Referenced by CTbl2AsnApp::Run().

ResetMiscFlags()

void CArgDescriptions::ResetMiscFlags ( TMiscFlags  flags )

inline

Clear the selected usage flags.

Definition at line 1045 of file ncbiargs.hpp.

References flags, and CArgDescriptions::m_MiscFlags.

Referenced by CArgDescriptions::PrintUsageIfNoArgs(), and CArgDescriptions::SetUsageContext().

SArgDependency()

CArgDescriptions::SArgDependency::SArgDependency ( const string  arg, EDependency  dep  )

inline

Definition at line 1123 of file ncbiargs.hpp.

SetArgsType() [1/2]

void CArgDescriptions::SetArgsType

(

EArgSetType

args_type

)

Set type of argument description (cmdline vs CGI).

Method performs verification of arguments, throws an exception if it finds positional args set for a CGI

Definition at line 2361 of file ncbiargs.cpp.

References CArgDescriptions::eCgiArgs, CArgDescriptions::m_ArgsType, CArgDescriptions::m_nExtra, CArgDescriptions::m_nExtraOpt, CArgDescriptions::m_PosArgs, and NCBI_THROW.

Referenced by CCgiApplication::SetupArgDescriptions().

SetArgsType() [2/2]

void CCommandArgDescriptions::SetArgsType ( EArgSetType  )

inlineprivate

Definition at line 1450 of file ncbiargs.hpp.

SetCommand()

CArgs* CArgs::SetCommand ( const string &  command )

inlineprotected

Set current command.

See also

CCommandArgDescriptions

Definition at line 473 of file ncbiargs.hpp.

References command, and CArgs::m_Command.

Referenced by CCommandArgDescriptions::CreateArgs().

SetConstraint() [1/3]

void CArgDesc::SetConstraint ( const CArgAllow *  constraint, CArgDescriptions::EConstraintNegate  negate = CArgDescriptions::eConstraint  )

virtual

Set argument constraint.

Parameters

constraint

The constraint object. ATTN: A CRef must always be taken on the object by the derived class's implementation of this method!

Reimplemented in CArgDescMandatory.

Definition at line 945 of file ncbiargs.cpp.

References CArgDesc::GetName(), CArgAllow::GetUsage(), kEmptyStr, NCBI_THROW, and s_ArgExptMsg().

SetConstraint() [2/3]

void CArgDescriptions::SetConstraint	(	const string &	name,
		const CArgAllow &	constraint,
		EConstraintNegate	negate = eConstraint
	)

This version of SetConstraint doesn't take the ownership of object 'constraint'.

Rather, it creates and uses a clone of the object.

Definition at line 2605 of file ncbiargs.cpp.

References CArgAllow::Clone(), CArgDescriptions::eConstraint, NCBI_THROW, and CArgDescriptions::SetConstraint().

SetConstraint() [3/3]

void CArgDescriptions::SetConstraint	(	const string &	name,
		const CArgAllow *	constraint,
		EConstraintNegate	negate = eConstraint
	)

Set additional user defined constraint on argument value.

Constraint is defined by CArgAllow and its derived classes. The constraint object must be allocated by "new", and it must NOT be freed by "delete" after it has been passed to CArgDescriptions!

Parameters

name	Name of the parameter(flag) to check
constraint	The constraint object. NOTE: A CRef will always be taken on the object, and its lifetime will be controlled by the CObject's smart-pointer mechanism.
negate	Flag indicates if this is inverted(NOT) constaint

See also

See "CArgAllow_***" classes for some pre-defined constraints

Definition at line 2591 of file ncbiargs.cpp.

References CArgDescriptions::eConstraint, set< Key, Compare >::end(), CArgDescriptions::m_Args, NCBI_THROW, and CArgDescriptions::x_Find().

Referenced by CFlatFileConfig::AddArgumentDescriptions(), CWinMaskConfig::AddWinMaskArgs(), CAVApp::Init(), SUApp::Init(), Cn3DNoWin::Init(), CId2FetchApp::Init(), CDbapiTestSpeedApp::InitSample(), s_InitDataOnly(), CPsgClientApp::s_InitRequest(), CStdCmdLineArgs::SetArgumentDescriptions(), CTaskCmdLineArgs::SetArgumentDescriptions(), CWindowSizeArg::SetArgumentDescriptions(), COffDiagonalRangeArg::SetArgumentDescriptions(), CWordThresholdArg::SetArgumentDescriptions(), CRMBlastNArg::SetArgumentDescriptions(), CGenericSearchArgs::SetArgumentDescriptions(), CNuclArgs::SetArgumentDescriptions(), CDiscontiguousMegablastArgs::SetArgumentDescriptions(), CLargestIntronSizeArgs::SetArgumentDescriptions(), CFrameShiftArgs::SetArgumentDescriptions(), CGeneticCodeArgs::SetArgumentDescriptions(), CPsiBlastArgs::SetArgumentDescriptions(), CMappingArgs::SetArgumentDescriptions(), CQueryOptionsArgs::SetArgumentDescriptions(), CMapperQueryOptionsArgs::SetArgumentDescriptions(), CBlastDatabaseArgs::SetArgumentDescriptions(), CIgBlastArgs::SetArgumentDescriptions(), CFormattingArgs::SetArgumentDescriptions(), CMapperFormattingArgs::SetArgumentDescriptions(), CMTArgs::SetArgumentDescriptions(), CHspFilteringArgs::SetArgumentDescriptions(), CMapperGenericSearchArgs::SetArgumentDescriptions(), CMapperNuclArgs::SetArgumentDescriptions(), CMapperLargestIntronSizeArgs::SetArgumentDescriptions(), CArgDescriptions::SetConstraint(), CSplignArgUtil::SetupArgDescriptions(), CCompartOptions::SetupArgDescriptions(), CProSplignOutputOptions::SetupArgDescriptions(), CDBLBClientApp::x_InitLookup(), CDBLBClientApp::x_InitWhereIs(), and CTbl2AsnApp::x_SetAlnArgs().

SetCurrentCommandGroup()

void CCommandArgDescriptions::SetCurrentCommandGroup

(

const string &

group

)

Set current command group name.

When printing help, commands will be arranged by group name.

Definition at line 3989 of file ncbiargs.cpp.

References CCommandArgDescriptions::m_CmdGroups, CCommandArgDescriptions::m_CurrentCmdGroup, and CCommandArgDescriptions::x_GetCommandGroupIndex().

Referenced by CCommandArgDescriptions::AddCommand().

SetCurrentGroup()

void CArgDescriptions::SetCurrentGroup

(

const string &

group

)

Set current arguments group name.

When printing descriptions for optional arguments (on -help command), they will be arranged by group name. Empty group name resets the group. Arguments without group are listed first immediately after mandatory arguments.

Definition at line 2632 of file ncbiargs.cpp.

References CArgDescriptions::m_ArgGroups, CArgDescriptions::m_CurrentGroup, and CArgDescriptions::x_GetGroupIndex().

Referenced by CFlatFileConfig::AddArgumentDescriptions(), CGenomicCollectionsService::AddArguments(), CWinMaskConfig::AddWinMaskArgs(), CArgDescriptions::CreateArgs(), CStdCmdLineArgs::SetArgumentDescriptions(), CTaskCmdLineArgs::SetArgumentDescriptions(), CWindowSizeArg::SetArgumentDescriptions(), COffDiagonalRangeArg::SetArgumentDescriptions(), CWordThresholdArg::SetArgumentDescriptions(), CRMBlastNArg::SetArgumentDescriptions(), CMatrixNameArg::SetArgumentDescriptions(), CGenericSearchArgs::SetArgumentDescriptions(), CFilteringArgs::SetArgumentDescriptions(), CNuclArgs::SetArgumentDescriptions(), CDiscontiguousMegablastArgs::SetArgumentDescriptions(), CCompositionBasedStatsArgs::SetArgumentDescriptions(), CGappedArgs::SetArgumentDescriptions(), CLargestIntronSizeArgs::SetArgumentDescriptions(), CFrameShiftArgs::SetArgumentDescriptions(), CGeneticCodeArgs::SetArgumentDescriptions(), CGapTriggerArgs::SetArgumentDescriptions(), CPssmEngineArgs::SetArgumentDescriptions(), CSearchStrategyArgs::SetArgumentDescriptions(), CPsiBlastArgs::SetArgumentDescriptions(), CPhiBlastArgs::SetArgumentDescriptions(), CKBlastpArgs::SetArgumentDescriptions(), CDeltaBlastArgs::SetArgumentDescriptions(), CMappingArgs::SetArgumentDescriptions(), CQueryOptionsArgs::SetArgumentDescriptions(), CMapperQueryOptionsArgs::SetArgumentDescriptions(), CBlastDatabaseArgs::SetArgumentDescriptions(), CIgBlastArgs::SetArgumentDescriptions(), CFormattingArgs::SetArgumentDescriptions(), CMapperFormattingArgs::SetArgumentDescriptions(), CMTArgs::SetArgumentDescriptions(), CRemoteArgs::SetArgumentDescriptions(), CDebugArgs::SetArgumentDescriptions(), CHspFilteringArgs::SetArgumentDescriptions(), CMbIndexArgs::SetArgumentDescriptions(), CSRASearchModeArgs::SetArgumentDescriptions(), CMapperStdCmdLineArgs::SetArgumentDescriptions(), CMapperGenericSearchArgs::SetArgumentDescriptions(), CMapperNuclArgs::SetArgumentDescriptions(), CMapperLargestIntronSizeArgs::SetArgumentDescriptions(), CInputStreamSource::SetStandardInputArgs(), CAdvancedAlignCleanup::SetupArgDescriptions(), CSplignArgUtil::SetupArgDescriptions(), CAlignCollapser::SetupArgDescriptions(), CGnomonAnnotatorArgUtil::SetupArgDescriptions(), and CChainerArgUtil::SetupArgDescriptions().

SetDependency()

void CArgDescriptions::SetDependency	(	const string &	arg1,
		EDependency	dep,
		const string &	arg2
	)

Define a dependency.

If arg1 was specified and requires arg2, arg2 is treated as a mandatory one even if was defined as optional. If arg1 excludes arg2, arg2 must not be set even if it's mandatory. This allows to create a set of arguments exactly one of which must be set.

Definition at line 2618 of file ncbiargs.cpp.

References CArgDescriptions::eExcludes, multimap_checker< Container >::insert(), and CArgDescriptions::m_Dependencies.

Referenced by CFlatFileConfig::AddArgumentDescriptions(), CLocalTaxon::AddArguments(), s_AddLatencyOptions(), s_InitDataFlags(), s_InitDataOnly(), CPsgClientApp::s_InitRequest(), CStdCmdLineArgs::SetArgumentDescriptions(), CDiscontiguousMegablastArgs::SetArgumentDescriptions(), CFrameShiftArgs::SetArgumentDescriptions(), CSearchStrategyArgs::SetArgumentDescriptions(), CPsiBlastArgs::SetArgumentDescriptions(), CPhiBlastArgs::SetArgumentDescriptions(), CDeltaBlastArgs::SetArgumentDescriptions(), CMapperQueryOptionsArgs::SetArgumentDescriptions(), CBlastDatabaseArgs::SetArgumentDescriptions(), CFormattingArgs::SetArgumentDescriptions(), CMapperFormattingArgs::SetArgumentDescriptions(), CMTArgs::SetArgumentDescriptions(), CHspFilteringArgs::SetArgumentDescriptions(), CMapperStdCmdLineArgs::SetArgumentDescriptions(), CMapperGenericSearchArgs::SetArgumentDescriptions(), CInputStreamSource::SetStandardInputArgs(), CAdvancedAlignCleanup::SetupArgDescriptions(), CCompartOptions::SetupArgDescriptions(), CDBLBClientApp::x_InitLookup(), and CTbl2AsnApp::x_SetAlnArgs().

SetDetailedDescription()

void CArgDescriptions::SetDetailedDescription

(

const string &

usage_description

)

Set detailed usage description.

In short help message, program will print short description defined in SetUsageContext method. In detailed help message, program will use detailed description defined here.

Parameters

usage_description

Detailed usage description

See also

SetUsageContext

Definition at line 3333 of file ncbiargs.cpp.

References CArgDescriptions::m_DetailedDescription.

SetErrorHandler() [1/2]

virtual void CArgDesc::SetErrorHandler ( CArgErrorHandler *  )

inlinevirtual

Set error handler for the argument.

Reimplemented in CArgDescMandatory.

Definition at line 1885 of file ncbiargs.hpp.

Referenced by CArgDescriptions::x_AddDesc().

SetErrorHandler() [2/2]

void CArgDescriptions::SetErrorHandler	(	const string &	name,
		CArgErrorHandler *	err_handler
	)

Set individual error handler for the argument.

The handler overrides the default one (if any) provided through the constructor. The same handler may be shared by several arguments. The handler object must be allocated by "new", and it must NOT be freed by "delete" after it has been passed to CArgDescriptions!

Parameters

name	Name of the parameter (flag) to set handler for
err_handler	Error handler

Definition at line 2642 of file ncbiargs.cpp.

References set< Key, Compare >::end(), err_handler(), CArgDescriptions::m_Args, NCBI_THROW, and CArgDescriptions::x_Find().

SetGroup()

virtual void CArgDesc::SetGroup ( size_t  )

inlinevirtual

Set argument group.

Reimplemented in CArgDesc_Flag, and CArgDescOptional.

Definition at line 1845 of file ncbiargs.hpp.

Referenced by CArgDescriptions::x_AddDesc().

SetMaxMembers()

CArgDependencyGroup & CArgDependencyGroup::SetMaxMembers

(

size_t

max_members

)

Parameters

max_members

No more than "max_members" of members (args or immediate groups listed in this group) are allowed to be in the "set" state. If this condition is not met, then this group will be marked as "not set".

Returns

"*this"

Definition at line 4920 of file ncbiargs.cpp.

References CArgDependencyGroup::m_MaxMembers.

SetMinMembers()

CArgDependencyGroup & CArgDependencyGroup::SetMinMembers

(

size_t

min_members

)

Parameters

min_members

Mark this group as "set" (in the context of CArgDescriptions::EDependency) if at least "min_members" of its members (args or groups listed in this group) are set.

Note

This condition can be weakened by "eInstantSet" mechanism.

See also

EInstantSet

Returns

"*this"

Definition at line 4914 of file ncbiargs.cpp.

References CArgDependencyGroup::m_MinMembers.

SetMiscFlags()

void CArgDescriptions::SetMiscFlags ( TMiscFlags  flags )

inline

Set the selected flags.

Definition at line 1039 of file ncbiargs.hpp.

References flags, and CArgDescriptions::m_MiscFlags.

Referenced by CArgDescriptions::PrintUsageIfNoArgs(), and CArgDescriptions::SetUsageContext().

SetOrdinalPosition()

void CArgValue::SetOrdinalPosition ( size_t  pos )

inlineprotected

Definition at line 340 of file ncbiargs.hpp.

References CArgValue::m_Ordinal.

Referenced by CArgs::Add().

SetPositionalMode()

void CArgDescriptions::SetPositionalMode ( EArgPositionalMode  positional_mode )

inline

Select mode for processing positional arguments.

Definition at line 582 of file ncbiargs.hpp.

References CArgDescriptions::m_PositionalMode.

SetStringList()

CArgValue::TStringArray & CArgValue::SetStringList ( )

virtual

Get reference on value list for further modification.

Reimplemented in CArg_String.

Definition at line 167 of file ncbiargs.cpp.

References CArgValue::m_Name, and NCBI_THROW.

Referenced by CArgs::Add(), and CArgDescriptions::ConvertKeys().

SetUsageContext()

void CArgDescriptions::SetUsageContext	(	const string &	usage_name,
		const string &	usage_description,
		bool	usage_sort_args = false,
		SIZE_TYPE	usage_width = 78
	)

Set extra info to be used by PrintUsage().

If "usage_name" is empty, it will be initialized using CNcbiApplicationAPI::GetProgramDisplayName

See also

SetDetailedDescription Format width

Parameters

usage_name	Program name
usage_description	Usage descr.
usage_sort_args	Sort args.

Definition at line 3303 of file ncbiargs.cpp.

References NStr::eNocase, ERR_POST_X, CArgDescriptions::fUsageSortArgs, CNcbiApplicationAPI::GetProgramDisplayName(), CNcbiApplicationAPI::Instance(), CArgDescriptions::m_UsageDescription, CArgDescriptions::m_UsageName, CArgDescriptions::m_UsageWidth, CArgDescriptions::ResetMiscFlags(), CArgDescriptions::SetMiscFlags(), NStr::TrimSuffixInPlace(), and Warning().

Referenced by COMSSA::AppInit(), CArgDescriptions::CArgDescriptions(), CSdbapiTest::Init(), CAVApp::Init(), Cn3DNoWin::Init(), CId2FetchApp::Init(), CNcbiTestApplication::Init(), CSdbapiSimpleApp::Init(), CProgramDescriptionArgs::SetArgumentDescriptions(), CIgBlastProgramDescriptionArgs::SetArgumentDescriptions(), CMapperProgramDescriptionArgs::SetArgumentDescriptions(), CDBLBClientApp::x_InitLookup(), CDBLBClientApp::x_InitWhatIs(), and CDBLBClientApp::x_InitWhereIs().

ShowAllArguments()

CArgDescriptions * CArgDescriptions::ShowAllArguments

(

bool

show_all

)

Include hidden arguments into USAGE.

Definition at line 2353 of file ncbiargs.cpp.

References CArgDescriptions::GetAllDescriptions(), and CArgDescriptions::m_HasHidden.

Verify() [1/7]

bool CArgAllow_Symbols::Verify ( const string &  value ) const

protectedvirtual

Verify if specified value is allowed.

Implements CArgAllow.

Reimplemented in CArgAllow_String.

Definition at line 4445 of file ncbiargs.cpp.

References ITERATE, CArgAllow_Symbols::m_SymClass, pi, s_IsAllowedSymbol(), and rapidjson::value.

Verify() [2/7]

bool CArgAllow_String::Verify ( const string &  value ) const

protectedvirtual

Verify if specified value is allowed.

Reimplemented from CArgAllow_Symbols.

Definition at line 4528 of file ncbiargs.cpp.

References ITERATE, CArgAllow_Symbols::m_SymClass, pi, s_IsAllowedSymbol(), and rapidjson::value.

Verify() [3/7]

bool CArgAllow_Strings::Verify ( const string &  value ) const

protectedvirtual

Verify if specified value is allowed.

Implements CArgAllow.

Definition at line 4605 of file ncbiargs.cpp.

References set< Key, Compare >::end(), set< Key, Compare >::find(), CArgAllow_Strings::m_Strings, and rapidjson::value.

Verify() [4/7]

bool CArgAllow_Int8s::Verify ( const string &  value ) const

protectedvirtual

Verify if specified value is allowed.

Implements CArgAllow.

Definition at line 4686 of file ncbiargs.cpp.

References ITERATE, CArgAllow_Int8s::m_MinMax, pi, s_StringToInt8(), val, and rapidjson::value.

Verify() [5/7]

bool CArgAllow_Doubles::Verify ( const string &  value ) const

protectedvirtual

Verify if specified value is allowed.

Implements CArgAllow.

Definition at line 4821 of file ncbiargs.cpp.

References NStr::fDecimalPosixOrLocal, ITERATE, CArgAllow_Doubles::m_MinMax, pi, NStr::StringToDouble(), val, and rapidjson::value.

Verify() [6/7]

bool CArgAllow_Regexp::Verify ( const string &  value ) const

virtual

Parameters

value

Argument value to match against the Perl regular expression

See also

CArgAllow_Regexp()

Implements CArgAllow.

Definition at line 60 of file arg_regexp.cpp.

References CArgAllow_Regexp::m_Regexp, and rapidjson::value.

Verify() [7/7]

virtual bool CArgAllow::Verify ( const string &  value ) const

pure virtual

Verify if specified value is allowed.

Implemented in CArgAllowGeneticCodeInteger, CArgAllow_Regexp, CArgAllow_Doubles, CArgAllow_Int8s, CArgAllow_Strings, CArgAllow_String, CArgAllow_Symbols, CArgAllowStringSet, CArgAllowIntegerSet, CArgAllowValuesBetween, CArgAllowValuesLessThanOrEqual, CArgAllowValuesGreaterThanOrEqual, and CArgAllowMaximumFileNameLength.

Referenced by CArgDescMandatory::ProcessArgument().

VerifyDefault()

void CArgDesc::VerifyDefault ( void  ) const

virtual

Verify argument default value.

Reimplemented in CArgDescDefault.

Definition at line 939 of file ncbiargs.cpp.

Referenced by CArgDescriptions::x_PreCheck().

VerifyName()

bool CArgDescriptions::VerifyName ( const string &  name, bool  extended = false  )

static

Verify if argument "name" is spelled correctly.

Argument name can contain only alphanumeric characters, dashes ('-') and underscore ('_'), or be empty. If the leading dash is present, it must be followed by a non-dash char ('-' or '–foo' are not valid names).

Definition at line 3338 of file ncbiargs.cpp.

References isdigit(), and s_IsArgNameChar().

Referenced by CArgs::Add(), CArgDesc::CArgDesc(), CArgValue::CArgValue(), and CArgDescriptions::x_CreateArg().

x_AddDesc()

void CArgDescriptions::x_AddDesc ( CArgDesc &  arg )

private

Helper method for adding description.

Definition at line 3368 of file ncbiargs.cpp.

References _ASSERT, CArgDescriptions::Exist(), CArgDescriptions::fHidden, CArgDescriptions::fOptionalSeparator, CArgDesc::GetFlags(), CArgDesc::GetName(), CRef< C, Locker >::GetPointerOrNull(), set< Key, Compare >::insert(), CArgDescriptions::m_Args, CArgDescriptions::m_CurrentGroup, CArgDescriptions::m_ErrorHandler, CArgDescriptions::m_HasHidden, CArgDescriptions::m_KeyFlagArgs, CArgDescriptions::m_NoSeparator, CArgDescriptions::m_OpeningArgs, CArgDescriptions::m_PosArgs, NCBI_THROW, s_IsAlias(), s_IsFlag(), s_IsKey(), s_IsOpening(), s_IsOptional(), CArgDesc::SetErrorHandler(), CArgDesc::SetGroup(), and CArgDescriptions::x_Find().

Referenced by CArgDescriptions::AddAlias(), CArgDescriptions::AddDefaultKey(), CArgDescriptions::AddDefaultPositional(), CArgDescriptions::AddExtra(), CArgDescriptions::AddFlag(), CArgDescriptions::AddKey(), CArgDescriptions::AddNegatedFlagAlias(), CArgDescriptions::AddOpening(), CArgDescriptions::AddOptionalKey(), CArgDescriptions::AddOptionalPositional(), and CArgDescriptions::AddPositional().

x_CheckAutoHelp()

void CArgDescriptions::x_CheckAutoHelp ( const string &  arg ) const

protected

Helper method for checking if auto help requested and throw CArgHelpException if help requested.

Definition at line 2840 of file ncbiargs.cpp.

References kEmptyStr, CArgDescriptions::m_AutoHelp, NCBI_THROW, s_AutoHelp, s_AutoHelpFull, s_AutoHelpShowAll, and s_AutoHelpXml.

Referenced by CCommandArgDescriptions::CreateArgs(), and CArgDescriptions::CreateArgs().

x_CreateArg() [1/2]

bool CArgDescriptions::x_CreateArg ( const string &  arg1, bool  have_arg2, const string &  arg2, unsigned *  n_plain, CArgs &  args  ) const

private

Process arguments.

Helper method to process arguments and build a CArgs object that is passed as the args parameter.

Returns

TRUE if specified "arg2" was used.

Parameters

arg1	Argument to process
have_arg2	Is there an arg. that follows?
arg2	Following argument
n_plain	Indicates number of args
args	Contains processed args

Definition at line 2857 of file ncbiargs.cpp.

References set< Key, Compare >::end(), CArgDescriptions::ePositionalMode_Loose, eq(), CArgs::GetAll(), kEmptyStr, kMax_UInt, CArgDescriptions::m_Args, CArgDescriptions::m_nExtra, CArgDescriptions::m_nExtraOpt, CArgDescriptions::m_OpeningArgs, CArgDescriptions::m_PosArgs, CArgDescriptions::m_PositionalMode, NCBI_THROW, NPOS, s_ArgDelimiter, NStr::UIntToString(), CArgDescriptions::VerifyName(), and CArgDescriptions::x_Find().

Referenced by CArgDescriptions::ConvertKeys(), and CArgDescriptions::CreateArgs().

x_CreateArg() [2/2]

bool CArgDescriptions::x_CreateArg ( const string &  arg1, const string &  name, bool  have_arg2, const string &  arg2, unsigned int  n_plain, CArgs &  args, bool  update = false, CArgValue **  new_value = 0  ) const

private

Returns

TRUE if specified "arg2" was used.

x_Evaluate()

bool CArgDependencyGroup::x_Evaluate ( const CArgs &  args, string *  arg_set, string *  arg_unset  ) const

private

Definition at line 4944 of file ncbiargs.cpp.

References map_checker< Container >::begin(), set< Key, Compare >::begin(), CArgDependencyGroup::eInstantSet, map_checker< Container >::end(), CArgs::Exist(), i, set< Key, Compare >::insert(), NStr::Join(), CArgDependencyGroup::m_Arguments, CArgDependencyGroup::m_Groups, CArgDependencyGroup::m_MaxMembers, CArgDependencyGroup::m_MinMembers, NCBI_THROW, result, map_checker< Container >::size(), and set< Key, Compare >::size().

Referenced by CArgDependencyGroup::Evaluate().

x_Find() [1/4]

CArgs::TArgsI CArgs::x_Find ( const string &  name )

private

Definition at line 1802 of file ncbiargs.cpp.

References set< Key, Compare >::end(), set< Key, Compare >::find(), CArgs::m_Args, and s_IsArgNameChar().

x_Find() [2/4]

CArgs::TArgsCI CArgs::x_Find ( const string &  name ) const

private

Find argument value with name "name".

Definition at line 1792 of file ncbiargs.cpp.

References set< Key, Compare >::end(), set< Key, Compare >::find(), CArgs::m_Args, and s_IsArgNameChar().

Referenced by CArgs::Add(), CArgs::Exist(), and CArgs::operator[]().

x_Find() [3/4]

CArgDescriptions::TArgsI CArgDescriptions::x_Find ( const string &  name, bool *  negative = NULL  )

private

Helper method to find named parameter.

'negative' (if provided) will indicate if the name referred to a negative alias.

Definition at line 2736 of file ncbiargs.cpp.

References set< Key, Compare >::end(), set< Key, Compare >::find(), CArgDesc_Alias::GetAliasedName(), CArgDesc_Alias::GetNegativeFlag(), CArgDescriptions::m_Args, and negative().

Referenced by CArgDescriptions::AddNegatedFlagAlias(), CArgDescriptions::CPrintUsage::CPrintUsage(), CArgDescriptions::Delete(), CArgDescriptions::Exist(), CArgDescriptions::SetConstraint(), CArgDescriptions::SetErrorHandler(), CArgDescriptions::x_AddDesc(), CArgDescriptions::x_CreateArg(), CArgDescriptions::x_Find(), CArgDescriptions::x_IsMultiArg(), CArgDescriptions::x_PostCheck(), and CArgDescriptions::x_PreCheck().

x_Find() [4/4]

CArgDescriptions::TArgsCI CArgDescriptions::x_Find ( const string &  name, bool *  negative = NULL  ) const

private

Helper method to find named parameter – const version.

'negative' (if provided) will indicate if the name referred to a negative alias.

Definition at line 2718 of file ncbiargs.cpp.

References set< Key, Compare >::end(), set< Key, Compare >::find(), CArgDesc_Alias::GetAliasedName(), CArgDesc_Alias::GetNegativeFlag(), CArgDescriptions::m_Args, negative(), and CArgDescriptions::x_Find().

x_GetCommandGroupIndex()

size_t CCommandArgDescriptions::x_GetCommandGroupIndex ( const string &  group ) const

private

Definition at line 4003 of file ncbiargs.cpp.

References NStr::EqualNocase(), g(), i, ITERATE, and CCommandArgDescriptions::m_CmdGroups.

Referenced by CCommandArgDescriptions::PrintUsage(), CCommandArgDescriptions::PrintUsageXml(), and CCommandArgDescriptions::SetCurrentCommandGroup().

x_GetGroupIndex()

size_t CArgDescriptions::x_GetGroupIndex ( const string &  group ) const

private

Get group index.

Returns group index in the m_ArgGroups, 0 for empty group name or the next group number for undefined group.

Definition at line 2755 of file ncbiargs.cpp.

References NStr::EqualNocase(), i, and CArgDescriptions::m_ArgGroups.

Referenced by CArgDescriptions::SetCurrentGroup().

x_IdentifyCommand()

string CCommandArgDescriptions::x_IdentifyCommand ( const string &  command ) const

private

Definition at line 4065 of file ncbiargs.cpp.

References a, map_checker< Container >::begin(), cmd, command, map_checker< Container >::end(), map_checker< Container >::find(), kEmptyStr, CCommandArgDescriptions::m_Aliases, CCommandArgDescriptions::m_Description, and NStr::StartsWith().

Referenced by CCommandArgDescriptions::CreateArgs(), and CCommandArgDescriptions::PrintUsage().

x_IsCommandMandatory()

bool CCommandArgDescriptions::x_IsCommandMandatory ( void  ) const

private

Definition at line 3998 of file ncbiargs.cpp.

References CCommandArgDescriptions::eCommandOptional, and CCommandArgDescriptions::m_Cmd_req.

Referenced by CCommandArgDescriptions::AddStdArguments(), CCommandArgDescriptions::CreateArgs(), CCommandArgDescriptions::PrintUsage(), and CCommandArgDescriptions::PrintUsageXml().

x_IsMultiArg()

bool CArgDescriptions::x_IsMultiArg ( const string &  name ) const

private

Returns TRUE if parameter supports multiple arguments.

Definition at line 3145 of file ncbiargs.cpp.

References set< Key, Compare >::end(), CArgDescriptions::fAllowMultiple, CArgDesc::GetFlags(), CArgDescriptions::m_Args, and CArgDescriptions::x_Find().

Referenced by CArgDescriptions::ConvertKeys().

x_PostCheck()

void CArgDescriptions::x_PostCheck ( CArgs &  args, unsigned int  n_plain, EPostCheckCaller  caller  ) const

private

Helper method for doing post-processing consistency checks.

Definition at line 3162 of file ncbiargs.cpp.

References CArgs::Add(), set< Key, Compare >::begin(), CArgDescriptions::eCgiArgs, CArgDescriptions::eConstraint, CArgDescriptions::eConvertKeys, CArgDescriptions::eExcludes, map_checker< Container >::end(), set< Key, Compare >::end(), CArgDescriptions::eRequires, CArgs::Exist(), map_checker< Container >::find(), set< Key, Compare >::find(), CArgDescriptions::fUsageIfNoArgs, CArgDescriptions::GetArgsType(), CArgDesc::GetName(), i, map_checker< Container >::insert(), set< Key, Compare >::insert(), CArgs::IsEmpty(), CArgDescriptions::IsSetMiscFlag(), ITERATE, kEmptyStr, CArgDescriptions::m_Dependencies, CArgDescriptions::m_DependencyGroups, CArgDescriptions::m_KeyFlagArgs, CArgDescriptions::m_nExtra, CArgDescriptions::m_OpeningArgs, CArgDescriptions::m_PosArgs, max(), NCBI_THROW, NStr::NumericToString(), CArgDesc::ProcessDefault(), s_ArgExptMsg(), NStr::StringToUInt(), NStr::UIntToString(), and CArgDescriptions::x_Find().

Referenced by CArgDescriptions::ConvertKeys(), and CArgDescriptions::CreateArgs().

x_PreCheck()

void CArgDescriptions::x_PreCheck ( void  ) const

private

Helper method for doing pre-processing consistency checks.

Definition at line 2769 of file ncbiargs.cpp.

References _ASSERT, a, set< Key, Compare >::begin(), CArgDescriptions::eConstraint, set< Key, Compare >::end(), CArgDescriptions::fOptionalSeparator, CArgDescriptions::fOptionalSeparatorAllowConflict, CArgDesc::GetName(), i, CArgDescriptions::m_Args, CArgDescriptions::m_nExtra, CArgDescriptions::m_NoSeparator, CArgDescriptions::m_PosArgs, n, NCBI_RETHROW, NCBI_THROW, NPOS, CArgDesc::VerifyDefault(), CException::what(), and CArgDescriptions::x_Find().

Referenced by CArgDescriptions::ConvertKeys(), and CArgDescriptions::CreateArgs().

x_PrintAliasesAsXml()

void CArgDescriptions::x_PrintAliasesAsXml ( CNcbiOstream &  out, const string &  name, bool  negated = false  ) const

private

Definition at line 3959 of file ncbiargs.cpp.

References a, CArgDesc_Alias::GetAliasedName(), CArgDesc::GetName(), CArgDesc_Alias::GetNegativeFlag(), ITERATE, CArgDescriptions::m_Args, out(), s_IsAlias(), s_WriteXmlLine(), and tag.

Referenced by CArgDescriptions::CPrintUsageXml::PrintArguments().

x_PrintComment()

void CArgDescriptions::x_PrintComment ( list< string > &  arr, const CArgDesc &  arg, SIZE_TYPE  width  ) const

private

Definition at line 3428 of file ncbiargs.cpp.

References arr, CArgDescriptions::eExcludes, CArgDescriptions::eInputFile, multimap_checker< Container >::equal_range(), CArgDescriptions::eRequires, CArgDescriptions::fConfidential, CArgDescriptions::fMandatorySeparator, NStr::fWrap_Hyphenate, CArgDesc_Alias::GetAliasedName(), CArgDesc::GetComment(), CArgDescDefault::GetDisplayValue(), CArgDesc::GetFlags(), CArgDesc::GetName(), CArgDesc_Alias::GetNegativeFlag(), CArgDesc_Flag::GetSetValue(), CArgDescriptions::GetTypeName(), CArgDesc::GetUsageCommentAttr(), CArgDesc::GetUsageSynopsis(), indent(), ITERATE, kEmptyStr, CArgDescriptions::m_Args, CArgDescriptions::m_Dependencies, NPOS, s_IsFlag(), s_IsPositional(), s_PrintCommentBody(), t, and NStr::Wrap().

x_SetDefault()

void CArgValue::x_SetDefault ( const string &  def_value, bool  from_def  )

protected

Definition at line 181 of file ncbiargs.cpp.

References CArgValue::fArgValue_FromDefault, CArgValue::fArgValue_HasDefault, CArgValue::m_Default, and CArgValue::m_Flags.

Referenced by CArgDescMandatory::ProcessArgument(), CArgDesc_Flag::ProcessArgument(), CArgDescDefault::ProcessDefault(), and CArgDesc_Flag::ProcessDefault().

~CArgAllow()

CArgAllow::~CArgAllow ( void  )

virtual

Definition at line 4342 of file ncbiargs.cpp.

~CArgAllow_Regexp()

CArgAllow_Regexp::~CArgAllow_Regexp ( void  )

virtual

Definition at line 54 of file arg_regexp.cpp.

~CArgDependencyGroup()

CArgDependencyGroup::~CArgDependencyGroup ( void  )

virtual

Definition at line 4910 of file ncbiargs.cpp.

~CArgDesc()

CArgDesc::~CArgDesc ( void  )

virtual

Destructor.

Definition at line 933 of file ncbiargs.cpp.

~CArgDescriptions()

CArgDescriptions::~CArgDescriptions ( void  )

virtual

Destructor.

Definition at line 2224 of file ncbiargs.cpp.

~CArgs()

CArgs::~CArgs

(

void

)

Destructor.

Definition at line 1755 of file ncbiargs.cpp.

~CArgValue()

CArgValue::~CArgValue ( void  )

protectedvirtual

Definition at line 161 of file ncbiargs.cpp.

~CCommandArgDescriptions()

CCommandArgDescriptions::~CCommandArgDescriptions ( void  )

virtual

Destructor.

Definition at line 3985 of file ncbiargs.cpp.

~CPrintUsage()

CArgDescriptions::CPrintUsage::~CPrintUsage

(

)

Definition at line 3656 of file ncbiargs.cpp.

~CPrintUsageXml()

CArgDescriptions::CPrintUsageXml::~CPrintUsageXml

(

)

Definition at line 3865 of file ncbiargs.cpp.

Variable Documentation

m_Aliases

map<string,string> CCommandArgDescriptions::m_Aliases

private

command to alias; one alias only

Definition at line 1460 of file ncbiargs.hpp.

Referenced by CCommandArgDescriptions::AddCommand(), CCommandArgDescriptions::PrintUsage(), CCommandArgDescriptions::PrintUsageXml(), and CCommandArgDescriptions::x_IdentifyCommand().

m_Arg

string CArgDescriptions::SArgDependency::m_Arg

Definition at line 1125 of file ncbiargs.hpp.

m_ArgGroups

TArgGroups CArgDescriptions::m_ArgGroups

private

Argument groups.

Definition at line 1141 of file ncbiargs.hpp.

Referenced by CArgDescriptions::CArgDescriptions(), CArgDescriptions::SetCurrentGroup(), and CArgDescriptions::x_GetGroupIndex().

m_Args [1/2]

TArgs CArgs::m_Args

private

Assoc. map of arguments' name/value.

Definition at line 484 of file ncbiargs.hpp.

Referenced by CArgs::Add(), CArgs::Assign(), CArgs::Exist(), CArgs::GetAll(), CArgs::IsEmpty(), CArgs::operator[](), CArgs::Print(), CArgs::Remove(), CArgs::Reset(), and CArgs::x_Find().

m_Args [2/2]

TArgs CArgDescriptions::m_Args

private

Assoc.map of arguments' name/descr.

Definition at line 1134 of file ncbiargs.hpp.

Referenced by CArgDescriptions::AddNegatedFlagAlias(), CArgDescriptions::CPrintUsage::CPrintUsage(), CArgDescriptions::Delete(), CArgDescriptions::Exist(), CArgDescriptions::CPrintUsageXml::PrintArguments(), CArgDescriptions::SetConstraint(), CArgDescriptions::SetErrorHandler(), CArgDescriptions::x_AddDesc(), CArgDescriptions::x_CreateArg(), CArgDescriptions::x_Find(), CArgDescriptions::x_IsMultiArg(), CArgDescriptions::x_PreCheck(), CArgDescriptions::x_PrintAliasesAsXml(), and CArgDescriptions::x_PrintComment().

m_args

list<const CArgDesc*> CArgDescriptions::CPrintUsage::m_args

private

Definition at line 1250 of file ncbiargs.hpp.

Referenced by CArgDescriptions::CPrintUsage::CPrintUsage().

m_ArgsType

EArgSetType CArgDescriptions::m_ArgsType

private

Type of arguments.

Definition at line 1133 of file ncbiargs.hpp.

Referenced by CArgDescriptions::GetArgsType(), and CArgDescriptions::SetArgsType().

m_Arguments

map<string, EInstantSet> CArgDependencyGroup::m_Arguments

private

Definition at line 1969 of file ncbiargs.hpp.

Referenced by CArgDependencyGroup::Add(), CArgDependencyGroup::PrintUsage(), CArgDependencyGroup::PrintUsageXml(), and CArgDependencyGroup::x_Evaluate().

m_AutoHelp

bool CArgDescriptions::m_AutoHelp

protected

Special flag "-h" activated.

Definition at line 1154 of file ncbiargs.hpp.

Referenced by CCommandArgDescriptions::AddCommand(), CArgDescriptions::AddStdArguments(), CArgDescriptions::CArgDescriptions(), CArgDescriptions::CPrintUsage::CPrintUsage(), CArgDescriptions::Delete(), CArgDescriptions::IsAutoHelpEnabled(), CCommandArgDescriptions::PrintUsage(), and CArgDescriptions::x_CheckAutoHelp().

m_Cmd_req

TCommandArgFlags CCommandArgDescriptions::m_Cmd_req

private

Definition at line 1457 of file ncbiargs.hpp.

Referenced by CCommandArgDescriptions::PrintUsage(), and CCommandArgDescriptions::x_IsCommandMandatory().

m_CmdGroups

list<string> CCommandArgDescriptions::m_CmdGroups

private

group names, and order

Definition at line 1462 of file ncbiargs.hpp.

Referenced by CCommandArgDescriptions::PrintUsage(), CCommandArgDescriptions::PrintUsageXml(), CCommandArgDescriptions::SetCurrentCommandGroup(), and CCommandArgDescriptions::x_GetCommandGroupIndex().

m_Command [1/2]

string CArgs::m_Command

private

Definition at line 486 of file ncbiargs.hpp.

Referenced by CArgs::Assign(), CArgs::GetCommand(), and CArgs::SetCommand().

m_Command [2/2]

string CCommandArgDescriptions::m_Command

mutableprivate

current command

Definition at line 1464 of file ncbiargs.hpp.

Referenced by CCommandArgDescriptions::CreateArgs(), and CCommandArgDescriptions::PrintUsage().

m_Commands

list<string> CCommandArgDescriptions::m_Commands

private

command names, and order

Definition at line 1461 of file ncbiargs.hpp.

Referenced by CCommandArgDescriptions::AddCommand(), CCommandArgDescriptions::PrintUsage(), and CCommandArgDescriptions::PrintUsageXml().

m_Comment

string CArgDesc::m_Comment

private

Argument description.

Definition at line 1895 of file ncbiargs.hpp.

Referenced by CArgDesc::GetComment().

m_CurrentCmdGroup

size_t CCommandArgDescriptions::m_CurrentCmdGroup

private

current group #

Definition at line 1463 of file ncbiargs.hpp.

Referenced by CCommandArgDescriptions::AddCommand(), and CCommandArgDescriptions::SetCurrentCommandGroup().

m_CurrentGroup

size_t CArgDescriptions::m_CurrentGroup

private

Currently selected group (0 = no group)

Definition at line 1142 of file ncbiargs.hpp.

Referenced by CArgDescriptions::SetCurrentGroup(), and CArgDescriptions::x_AddDesc().

m_Default

string CArgValue::m_Default

protected

Definition at line 348 of file ncbiargs.hpp.

Referenced by CArgValue::GetDefault(), and CArgValue::x_SetDefault().

m_Dep

EDependency CArgDescriptions::SArgDependency::m_Dep

Definition at line 1126 of file ncbiargs.hpp.

m_Dependencies

TDependencies CArgDescriptions::m_Dependencies

private

Arguments' dependencies.

Definition at line 1144 of file ncbiargs.hpp.

Referenced by CArgDescriptions::CPrintUsageXml::PrintArguments(), CArgDescriptions::SetDependency(), CArgDescriptions::x_PostCheck(), and CArgDescriptions::x_PrintComment().

m_DependencyGroups

set< CConstRef<CArgDependencyGroup> > CArgDescriptions::m_DependencyGroups

private

Definition at line 1146 of file ncbiargs.hpp.

Referenced by CArgDescriptions::AddDependencyGroup(), and CArgDescriptions::x_PostCheck().

m_desc [1/2]

const CArgDescriptions& CArgDescriptions::CPrintUsage::m_desc

private

Definition at line 1249 of file ncbiargs.hpp.

m_desc [2/2]

const CArgDescriptions& CArgDescriptions::CPrintUsageXml::m_desc

private

Definition at line 1259 of file ncbiargs.hpp.

m_Description [1/2]

TDescriptions CCommandArgDescriptions::m_Description

private

command to ArgDescriptions

Definition at line 1458 of file ncbiargs.hpp.

Referenced by CCommandArgDescriptions::AddCommand(), CCommandArgDescriptions::AddStdArguments(), CCommandArgDescriptions::CreateArgs(), CCommandArgDescriptions::GetAllDescriptions(), CCommandArgDescriptions::PrintUsage(), CCommandArgDescriptions::PrintUsageXml(), and CCommandArgDescriptions::x_IdentifyCommand().

m_Description [2/2]

string CArgDependencyGroup::m_Description

private

Definition at line 1967 of file ncbiargs.hpp.

Referenced by CArgDependencyGroup::PrintUsage(), and CArgDependencyGroup::PrintUsageXml().

m_DetailedDescription

string CArgDescriptions::m_DetailedDescription

protected

Program long description.

Definition at line 1152 of file ncbiargs.hpp.

Referenced by CArgDescriptions::CPrintUsageXml::CPrintUsageXml(), and CArgDescriptions::SetDetailedDescription().

m_ErrorHandler

CRef<CArgErrorHandler> CArgDescriptions::m_ErrorHandler

private

Global error handler or NULL.

Definition at line 1160 of file ncbiargs.hpp.

Referenced by CArgDescriptions::CArgDescriptions(), and CArgDescriptions::x_AddDesc().

m_Flags [1/2]

TArgValueFlags CArgValue::m_Flags

protected

Definition at line 349 of file ncbiargs.hpp.

Referenced by CArgValue::GetDefault(), and CArgValue::x_SetDefault().

m_Flags [2/2]

CArgDescriptions::TFlags CArgDesc::m_Flags

private

Definition at line 1896 of file ncbiargs.hpp.

Referenced by CArgDesc::GetFlags().

m_Groups [1/2]

map<string, size_t > CCommandArgDescriptions::m_Groups

private

command to group #

Definition at line 1459 of file ncbiargs.hpp.

Referenced by CCommandArgDescriptions::AddCommand(), CCommandArgDescriptions::PrintUsage(), and CCommandArgDescriptions::PrintUsageXml().

m_Groups [2/2]

map<CConstRef<CArgDependencyGroup>, EInstantSet> CArgDependencyGroup::m_Groups

private

Definition at line 1970 of file ncbiargs.hpp.

Referenced by CArgDependencyGroup::Add(), CArgDependencyGroup::PrintUsage(), CArgDependencyGroup::PrintUsageXml(), and CArgDependencyGroup::x_Evaluate().

m_HasHidden

bool CArgDescriptions::m_HasHidden

protected

Has hidden arguments.

Definition at line 1155 of file ncbiargs.hpp.

Referenced by CCommandArgDescriptions::AddCommand(), CArgDescriptions::AddStdArguments(), CCommandArgDescriptions::AddStdArguments(), CArgDescriptions::CPrintUsage::CPrintUsage(), CCommandArgDescriptions::PrintUsage(), CArgDescriptions::ShowAllArguments(), and CArgDescriptions::x_AddDesc().

m_KeyFlagArgs

TKeyFlagArgs CArgDescriptions::m_KeyFlagArgs

private

Key/flag args, in order of insertion.

Definition at line 1137 of file ncbiargs.hpp.

Referenced by CArgDescriptions::ConvertKeys(), CArgDescriptions::CPrintUsage::CPrintUsage(), CArgDescriptions::Delete(), CArgDescriptions::x_AddDesc(), and CArgDescriptions::x_PostCheck().

m_MaxMembers

size_t CArgDependencyGroup::m_MaxMembers

private

Definition at line 1968 of file ncbiargs.hpp.

Referenced by CArgDependencyGroup::PrintUsage(), CArgDependencyGroup::PrintUsageXml(), CArgDependencyGroup::SetMaxMembers(), and CArgDependencyGroup::x_Evaluate().

m_MinMax [1/2]

set< TInterval > CArgAllow_Int8s::m_MinMax

protected

Definition at line 1734 of file ncbiargs.hpp.

Referenced by CArgAllow_Int8s::Allow(), CArgAllow_Int8s::AllowRange(), CArgAllow_Int8s::Clone(), CArgAllow_Integers::Clone(), CArgAllow_Int8s::GetUsage(), CArgAllow_Integers::GetUsage(), CArgAllow_Int8s::PrintUsageXml(), and CArgAllow_Int8s::Verify().

m_MinMax [2/2]

set< TInterval > CArgAllow_Doubles::m_MinMax

protected

Definition at line 1808 of file ncbiargs.hpp.

Referenced by CArgAllow_Doubles::Allow(), CArgAllow_Doubles::AllowRange(), CArgAllow_Doubles::Clone(), CArgAllow_Doubles::GetUsage(), CArgAllow_Doubles::PrintUsageXml(), and CArgAllow_Doubles::Verify().

m_MinMembers

size_t CArgDependencyGroup::m_MinMembers

private

Definition at line 1968 of file ncbiargs.hpp.

Referenced by CArgDependencyGroup::PrintUsage(), CArgDependencyGroup::PrintUsageXml(), CArgDependencyGroup::SetMinMembers(), and CArgDependencyGroup::x_Evaluate().

m_MiscFlags

TMiscFlags CArgDescriptions::m_MiscFlags

private

Flags for USAGE, error handling etc.

Definition at line 1145 of file ncbiargs.hpp.

Referenced by CArgDescriptions::IsSetMiscFlag(), CArgDescriptions::ResetMiscFlags(), and CArgDescriptions::SetMiscFlags().

m_Name [1/3]

string CArgValue::m_Name

protected

Argument name.

Definition at line 346 of file ncbiargs.hpp.

Referenced by CArgs::Add(), CArgValue::CArgValue(), CArgValue::GetName(), and CArgValue::SetStringList().

m_Name [2/3]

string CArgDesc::m_Name

private

Argument name.

Definition at line 1894 of file ncbiargs.hpp.

Referenced by CArgDesc::CArgDesc(), and CArgDesc::GetName().

m_Name [3/3]

string CArgDependencyGroup::m_Name

private

Definition at line 1966 of file ncbiargs.hpp.

Referenced by CArgDependencyGroup::PrintUsage(), and CArgDependencyGroup::PrintUsageXml().

m_nExtra [1/2]

size_t CArgs::m_nExtra

private

Cached # of unnamed positional arguments.

Definition at line 485 of file ncbiargs.hpp.

Referenced by CArgs::Add(), CArgs::Assign(), CArgs::CArgs(), CArgs::GetNExtra(), CArgs::operator[](), and CArgs::Reset().

m_nExtra [2/2]

unsigned CArgDescriptions::m_nExtra

private

Definition at line 1139 of file ncbiargs.hpp.

Referenced by CArgDescriptions::AddExtra(), CArgDescriptions::Delete(), CArgDescriptions::CPrintUsageXml::PrintArguments(), CArgDescriptions::SetArgsType(), CArgDescriptions::x_CreateArg(), CArgDescriptions::x_PostCheck(), and CArgDescriptions::x_PreCheck().

m_nExtraOpt

unsigned CArgDescriptions::m_nExtraOpt

private

> # of mandatory extra args

# of optional extra args

Definition at line 1140 of file ncbiargs.hpp.

Referenced by CArgDescriptions::AddExtra(), CArgDescriptions::Delete(), CArgDescriptions::CPrintUsageXml::PrintArguments(), CArgDescriptions::SetArgsType(), and CArgDescriptions::x_CreateArg().

m_NoSeparator

string CArgDescriptions::m_NoSeparator

private

Arguments allowed to use no separator.

Definition at line 1138 of file ncbiargs.hpp.

Referenced by CArgDescriptions::x_AddDesc(), and CArgDescriptions::x_PreCheck().

m_OpeningArgs

TPosArgs CArgDescriptions::m_OpeningArgs

private

Opening args, ordered by position in cmd.-line.

Definition at line 1136 of file ncbiargs.hpp.

Referenced by CArgDescriptions::CPrintUsage::CPrintUsage(), CArgDescriptions::CPrintUsageXml::PrintArguments(), CArgDescriptions::x_AddDesc(), CArgDescriptions::x_CreateArg(), and CArgDescriptions::x_PostCheck().

m_Ordinal

size_t CArgValue::m_Ordinal

protected

Definition at line 347 of file ncbiargs.hpp.

Referenced by CArgValue::GetOrdinalPosition(), and CArgValue::SetOrdinalPosition().

m_out

CNcbiOstream& CArgDescriptions::CPrintUsageXml::m_out

private

Definition at line 1260 of file ncbiargs.hpp.

Referenced by CArgDescriptions::CPrintUsageXml::CPrintUsageXml().

m_Pattern

const string CArgAllow_Regexp::m_Pattern

private

Regexp pattern to match against.

Definition at line 84 of file arg_regexp.hpp.

Referenced by CArgAllow_Regexp::Clone(), CArgAllow_Regexp::GetUsage(), and CArgAllow_Regexp::PrintUsageXml().

m_PosArgs

TPosArgs CArgDescriptions::m_PosArgs

private

Pos. args, ordered by position in cmd.-line.

Definition at line 1135 of file ncbiargs.hpp.

Referenced by CArgDescriptions::CPrintUsage::CPrintUsage(), CArgDescriptions::Delete(), CArgDescriptions::CPrintUsageXml::PrintArguments(), CArgDescriptions::SetArgsType(), CArgDescriptions::x_AddDesc(), CArgDescriptions::x_CreateArg(), CArgDescriptions::x_PostCheck(), and CArgDescriptions::x_PreCheck().

m_PositionalMode

EArgPositionalMode CArgDescriptions::m_PositionalMode

private

Processing of positional args.

Definition at line 1143 of file ncbiargs.hpp.

Referenced by CArgDescriptions::GetPositionalMode(), CArgDescriptions::SetPositionalMode(), and CArgDescriptions::x_CreateArg().

m_Regexp

CRegexp CArgAllow_Regexp::m_Regexp

private

Pre-compiled regexp.

Definition at line 85 of file arg_regexp.hpp.

Referenced by CArgAllow_Regexp::Verify().

m_Strings

TStrings CArgAllow_Strings::m_Strings

protected

Set of allowed string values.

Definition at line 1690 of file ncbiargs.hpp.

Referenced by CArgAllow_Strings::Allow(), CArgAllow_Strings::Clone(), CArgAllow_Strings::GetUsage(), CArgAllow_Strings::PrintUsageXml(), and CArgAllow_Strings::Verify().

m_SymClass

set< TSymClass > CArgAllow_Symbols::m_SymClass

protected

Definition at line 1581 of file ncbiargs.hpp.

Referenced by CArgAllow_Symbols::Allow(), CArgAllow_Symbols::Clone(), CArgAllow_String::Clone(), CArgAllow_Symbols::GetUsage(), CArgAllow_String::GetUsage(), CArgAllow_Symbols::PrintUsageXml(), CArgAllow_String::PrintUsageXml(), CArgAllow_Symbols::Verify(), and CArgAllow_String::Verify().

m_UsageDescription

string CArgDescriptions::m_UsageDescription

protected

Program description.

Definition at line 1151 of file ncbiargs.hpp.

Referenced by CArgDescriptions::CPrintUsageXml::CPrintUsageXml(), and CArgDescriptions::SetUsageContext().

m_UsageName

string CArgDescriptions::m_UsageName

protected

Program name.

Definition at line 1150 of file ncbiargs.hpp.

Referenced by CArgDescriptions::CPrintUsageXml::CPrintUsageXml(), CArgDescriptions::PrintUsage(), CCommandArgDescriptions::PrintUsage(), and CArgDescriptions::SetUsageContext().

m_UsageWidth

SIZE_TYPE CArgDescriptions::m_UsageWidth

protected

Maximum length of a usage line.

Definition at line 1153 of file ncbiargs.hpp.

Referenced by CArgDescriptions::SetUsageContext().

Friends

CArgDesc_Flag

friend class CArgDesc_Flag

friend

Definition at line 332 of file ncbiargs.hpp.

CArgDescDefault

friend class CArgDescDefault

friend

Definition at line 330 of file ncbiargs.hpp.

CArgDescMandatory

friend class CArgDescMandatory

friend

Definition at line 331 of file ncbiargs.hpp.

CArgs

friend class CArgs

friend

Definition at line 329 of file ncbiargs.hpp.

CCommandArgDescriptions [1/2]

friend class CCommandArgDescriptions

friend

Definition at line 491 of file ncbiargs.hpp.

CCommandArgDescriptions [2/2]

friend class CCommandArgDescriptions

friend

Definition at line 1156 of file ncbiargs.hpp.