api Directory Reference

Directory dependency graph for api:

Files
file	aalookup_unit_test.cpp [code]
file	aascan_unit_test.cpp [code]
file	bl2seq_unit_test.cpp [code]
file	blast_test_util.cpp [code]
	Utilities to develop and debug unit tests for BLAST.
file	blast_test_util.hpp [code]
	Utilities to develop and debug unit tests for BLAST.
file	blast_unit_test.cpp [code]
	Unit tests for the CBl2Seq class.
file	blastdiag_unit_test.cpp [code]
file	blastengine_unit_test.cpp [code]
file	blastextend_unit_test.cpp [code]
file	blastfilter_unit_test.cpp [code]
file	blasthits_unit_test.cpp [code]
file	blastoptions_unit_test.cpp [code]
	Unit tests for the BLAST options.
file	blastsetup_unit_test.cpp [code]
file	delta_unit_test.cpp [code]
	Unit test module for deltablast.
file	ensure_enough_corelib.hpp [code]
	Ensure direct dependencies on enough of the core xncbi library to satisfy shared libraries that depend on it.
file	gapinfo_unit_test.cpp [code]
file	gencode_singleton_unit_test.cpp [code]
file	hspfilter_besthit_unit_test.cpp [code]
file	hspfilter_culling_unit_test.cpp [code]
	Unit tests for the culling.
file	hspstream_test_util.cpp [code]
	Auxiliary utilities needed for testing HSP stream interface.
file	hspstream_test_util.hpp [code]
	Auxiliary utilities needed for testing HSP stream interface.
file	hspstream_unit_test.cpp [code]
file	linkhsp_unit_test.cpp [code]
file	magicblast_unit_test.cpp [code]
file	mockseqsrc1_unit_test.cpp [code]
file	mockseqsrc2_unit_test.cpp [code]
file	msa2pssm_unit_test.cpp [code]
file	neutral_seqalign.hpp [code]
	Neutral representation of a sequence alignment produced by BLAST.
file	ntlookup_unit_test.cpp [code]
file	ntscan_unit_test.cpp [code]
file	nuclwordfinder_unit_test.cpp [code]
file	optionshandle_unit_test.cpp [code]
file	phiblast_unit_test.cpp [code]
file	prelimsearch_unit_test.cpp [code]
file	psibl2seq_unit_test.cpp [code]
file	psiblast_iteration_unit_test.cpp [code]
file	psiblast_unit_test.cpp [code]
file	pssm_test_util.cpp [code]
file	pssm_test_util.hpp [code]
	Utilities to develop and debug unit tests that deal with PSSM computation.
file	pssmcreate_cdd_unit_test.cpp [code]
	Unit test module for creation of PSSMs from multiple alignments of conserved domains.
file	pssmcreate_unit_test.cpp [code]
file	pssmenginefreqratios_unit_test.cpp [code]
file	querydata_unit_test.cpp [code]
file	queryinfo_unit_test.cpp [code]
file	redoalignment_unit_test.cpp [code]
file	remote_blast_unit_test.cpp [code]
file	rmblast_blasthits_unit_test.cpp [code]
file	rmblast_traceback_unit_test.cpp [code]
file	rps_unit_test.cpp [code]
file	scoreblk_unit_test.cpp [code]
file	search_strategy_unit_test.cpp [code]
file	seqalign_cmp.cpp [code]
	API to compare CSeq-aligns produced by BLAST.
file	seqalign_cmp.hpp [code]
	API to compare CSeq-aligns produced by BLAST.
file	seqalign_set_convert.cpp [code]
	Converts a Seq-align-set into a neutral seqalign for use with the CSeqAlignCmp class.
file	seqalign_set_convert.hpp [code]
	Converts a Seq-align-set into a neutral seqalign for use with the CSeqAlignCmp class.
file	seqinfosrc_unit_test.cpp [code]
file	seqsrc_mock.cpp [code]
	Mock object implementations of the BlastSeqSrc interface.
file	seqsrc_mock.hpp [code]
	Mock object which implements the BlastSeqSrc interface for testing purposes.
file	seqsrc_unit_test.cpp [code]
file	setupfactory_unit_test.cpp [code]
file	split_query_unit_test.cpp [code]
file	stat_unit_test.cpp [code]
file	subj_ranges_unit_test.cpp [code]
	Unit tests for the functionality to keep track of HSP ranges to fetch during the traceback stage.
file	test_objmgr.cpp [code]
file	test_objmgr.hpp [code]
file	traceback_unit_test.cpp [code]
file	tracebacksearch_unit_test.cpp [code]
file	uniform_search_unit_test.cpp [code]
	Unit tests for the uniform search API.
file	version_reference_unit_test.cpp [code]