Similar studies for GEO DataSets (Select 200057451) - GEO DataSets

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Items: 20

Select item 2000574511.

Comparative phenotypic analysis of the major fungal pathogens Candida parapsilosis and Candida albicans

(Submitter supplied) Abstract: Candida parapsilosis and Candida albicans are human fungal pathogens that belong to the CUG clade in the Saccharomycotina. In contrast to C. albicans, relatively little is known about the virulence properties of C. parapsilosis, a pathogen particularly associated with infections of premature neonates. We describe here the construction of >200 C. parapsilosis strains carrying double allele deletions of transcription factors, protein kinases and species-specific genes. more...

Organism:: Candida parapsilosis

Type:: Expression profiling by high throughput sequencing

Platform:: GPL18663
24 Samples

Download data: TXT

Series

Accession:: GSE57451

ID:: 200057451

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000334902.

Conserved and divergent roles of Bcr1 and CFEM proteins in Candida parapsilosis and Candida albicans

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Candida parapsilosis; Candida albicans

Type:: Expression profiling by array

Platforms:: GPL13192 GPL10903
18 Samples

Download data: GPR

Series

Accession:: GSE33490

ID:: 200033490

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000334623.

Transcriptional profile of Candida parapsilosis CLIB214 culture in low iron conditions

(Submitter supplied) Whole genome microarrays were used to generate the transcriptional profile of Candida parapsilosis in low iron conditions

Organism:: Candida parapsilosis

Type:: Expression profiling by array

Platform:: GPL13192
7 Samples

Download data: GPR

Series

Accession:: GSE33462

ID:: 200033462

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000334614.

Transcriptional profile of Candida parapsilosis bcr1 knockout.

(Submitter supplied) Whole genome microarrays were used to compare the transcriptional profile of Candida parapsilosis bcr1 knockout to wild type cells.

Organism:: Candida parapsilosis

Type:: Expression profiling by array

Platform:: GPL13192
7 Samples

Download data: GPR

Series

Accession:: GSE33461

ID:: 200033461

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000334605.

Transcriptional profile of Candida albicans bcr1 knockout.

(Submitter supplied) Whole genome microarrays were used to compare the transcriptional profile of Candida albicans bcr1 knockout to wild type cells.

Organism:: Candida albicans

Type:: Expression profiling by array

Platform:: GPL10903
4 Samples

Download data: GPR

Series

Accession:: GSE33460

ID:: 200033460

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Select item 2000444496.

Pheromone-induced biofilm arrays in the planktonic and pheromone-induced biofilm growth conditions

(Submitter supplied) Candida albicans can stochastically switch between two phenotypes, white and opaque. Opaque cells are the sexually competent form of C. albicans and therefore undergo efficient polarized growth and mating in the presence of pheromone. In contrast, white cells cannot mate, but are induced - under a specialized set of conditions - to form biofilms in response to pheromone. In this work, we compare the genetic regulation of such "pheromone-stimulated" biofilms with that of "conventional" C. more...

Organism:: Candida albicans

Type:: Expression profiling by array

Platform:: GPL16385
17 Samples

Download data: GPR

Series

Accession:: GSE44449

ID:: 200044449

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Select item 2001527007.

Transcriptional responses of primary murine macrophages to four Candida species

(Submitter supplied) Candidiasis is an infection caused by yeasts of the genus Candida that ranges in severity from debilitating mucosal infections to disseminated disease with high mortality rates. C. albicans is the most common cause of infection, but non-albicans species collectively represent a significant disease burden. Disseminated disease rarely affects immunocompetent individuals, largely due to the action of innate immune cells, including macrophages, in controlling infection. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24247
21 Samples

Download data: TXT

Series

Accession:: GSE152700

ID:: 200152700

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001512888.

Comparative transcriptomic analysis of the response of CUG-clade Candida species to phagocytosis

(Submitter supplied) Pathogenic Candida fungi are a leading cause of opportunistic, hospital-associated bloodstream infections with high mortality rates, typically in immunocompromised patients. Several species, including C. albicans, the most prevalent cause of infection, belong to the monophyletic CUG clade of yeasts. Much is known about the interaction of C. albicans with innate immune cells, which are crucial for controlling infection. more...

Organism:: Candida albicans; Lodderomyces elongisporus; Candida parapsilosis; Clavispora lusitaniae; Candida tropicalis; Mus musculus; Candida dubliniensis

Type:: Expression profiling by high throughput sequencing

12 related Platforms
24 Samples

Download data: TXT

Series

Accession:: GSE151288

ID:: 200151288

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001343219.

Filamentation is Associated with Reduced Pathogenicity of Multiple Non-albicans Candida Species

(Submitter supplied) Candidiasis affects a wide variety of immunocompromised individuals, including HIV/AIDS patients and cancer patients on chemotherapy. Candida albicans, a major human fungal pathogen, accounts for about 50% of all cases, while the remainder are caused by the less pathogenic non-albicans Candida species (NACS). These species are believed to be less pathogenic, in part, because they do not filament as readily or robustly as C. more...

Organism:: Candida parapsilosis; Candida tropicalis

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL21876 GPL18663
16 Samples

Download data: TXT

Series

Accession:: GSE134321

ID:: 200134321

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20003271610.

Transcriptional landscape of the pathogenic yeast Candida parapsilosis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Candida parapsilosis

Type:: Expression profiling by array; Expression profiling by high throughput sequencing

Platforms:: GPL13192 GPL14718
34 Samples

Download data: GPR, SAM

Series

Accession:: GSE32716

ID:: 200032716

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Select item 20003271411.

Transcriptional landscape of Candida parapsilosis

(Submitter supplied) We used next generation sequencing (RNA-seq) to determine the transcriptional profile of C. parapsilosis growing in several conditions including different media, temperatures and oxygen concentrations.

Organism:: Candida parapsilosis

Type:: Expression profiling by high throughput sequencing

Platform:: GPL14718
26 Samples

Download data: SAM

Series

Accession:: GSE32714

ID:: 200032714

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20003271312.

Transcriptional profile of Candida parapsilosis CLIB214 versus UPC2 delete, both at 1% oxygen (hypoxia)

(Submitter supplied) Whole genome microarray were used to generate the transcriptional profile of C. parapsilosis UPC2 delete in hypoxia.

Organism:: Candida parapsilosis

Type:: Expression profiling by array

Platform:: GPL13192
4 Samples

Download data: GPR

Series

Accession:: GSE32713

ID:: 200032713

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Select item 20003271213.

Transcriptional profile of Candida parapsilosis CLIB214 21% Oxygen (normoxia) versus at 1% oxygen (hypoxia).

(Submitter supplied) Whole genome microarray were used to generate the transcriptional profile of C. parapsilosis in hypoxic condition.

Organism:: Candida parapsilosis

Type:: Expression profiling by array

Platform:: GPL13192
4 Samples

Download data: GPR

Series

Accession:: GSE32712

ID:: 200032712

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Select item 20001383214.

Hypoxia and biofilms in Candida parapsilosis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Candida parapsilosis

Type:: Expression profiling by array

Platforms:: GPL4574 GPL7693
10 Samples

Download data: GPR

Series

Accession:: GSE13832

ID:: 200013832

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Select item 20001372215.

Transcriptional response of Candida parapsilosis in low oxygen (hypoxic) conditions in SD media

(Submitter supplied) Whole genome microarray was used to compare the transcriptional profile of C. parapsilosis growing in normoxic (21% oxygen) and hypoxic (1% oxygen) conditions.

Organism:: Candida parapsilosis

Type:: Expression profiling by array

Platform:: GPL7693
6 Samples

Download data: GPR

Series

Accession:: GSE13722

ID:: 200013722

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Select item 20001371716.

Transcriptional profile of Candida parapsilosis in SD media

(Submitter supplied) Partial genome microarray and plankton cells

Organism:: Candida parapsilosis

Type:: Expression profiling by array

Platform:: GPL4574
4 Samples

Download data: GPR

Series

Accession:: GSE13717

ID:: 200013717

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Select item 20004288617.

ChIP-Seq analysis of Candida albicans Sfl1p and Sfl2p

(Submitter supplied) Sfl1p and Sfl2p are two homologous heat shock factor-type transcriptional regulators that antagonistically control morphogenesis in Candida albicans, while being required for full pathogenesis and virulence. To understand how Sfl1p and Sfl2p exert their function, we combined genome-wide location and expression analyses to reveal their transcriptional targets in vivo together with the associated changes of the C. more...

Organism:: Candida albicans

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL15645
8 Samples

Download data: WIG

Series

Accession:: GSE42886

ID:: 200042886

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20011418018.

Homo sapiens whole blood infected with Candida spp.

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Nakaseomyces glabratus; Homo sapiens; Candida tropicalis; Candida albicans; Candida parapsilosis

Type:: Expression profiling by high throughput sequencing

5 related Platforms
75 Samples

Download data

Series

Accession:: GSE114180

ID:: 200114180

PubMed Full text in PMC Similar studies

Select item 20011417919.

Homo sapiens whole blood.

(Submitter supplied) RNA extracted at 240min. Samples are rRNA depleted. Expression measurement of Homo sapiens genes.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL16791
3 Samples

Download data: CSV

Series

Accession:: GSE114179

ID:: 200114179

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 20011417820.

Homo sapiens whole blood infected with Candida spp. (here: Candida tropicalis)

(Submitter supplied) Homo sapiens fresh whole blood was infected with Candida tropicalis. RNA-pool of both species extracted at 0min (control), 15, 30, 60, 120, 240 min. Samples are rRNA depleted. Measurement of Candida tropicalis gene expression.