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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 29, 2016 |
| Title |
nCounter Mouse Inflammation panel V2 |
| Technology type |
other |
| Distribution |
commercial |
| Organism |
Mus musculus |
| Manufacturer |
NanoString |
| Manufacture protocol |
See manufacturer's website (http://www.nanostring.com)
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| Submission date |
Sep 04, 2015 |
| Last update date |
Jul 12, 2022 |
| Contact name |
NanoString Technologies |
| Organization name |
NanoString Technologies
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| Street address |
530 Fairview Ave N | Suite 2000
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| City |
Seattle |
| ZIP/Postal code |
98109 |
| Country |
USA |
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| Samples (193)
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GSM2226141, GSM2226142, GSM2226143, GSM2226144, GSM2226145, GSM2226146
GSM2226147, GSM2226148, GSM2226149, GSM2226150, GSM2226151, GSM2226152, GSM2226153, GSM2226154, GSM2226155, GSM2226156, GSM2226157, GSM2226158, GSM2226159, GSM2226160, GSM2226161, GSM2226162, GSM2226163, GSM2226164, GSM2226173, GSM2226174, GSM2226175, GSM2226176, GSM2226177, GSM2226178, GSM2226179, GSM2226180, GSM2745741, GSM2745742, GSM2745743, GSM2745744, GSM2745745, GSM2745746, GSM2745747, GSM2745748, GSM2745749, GSM2745750, GSM2745751, GSM2745752, GSM2745753, GSM2745754, GSM2745755, GSM2745756, GSM2745757, GSM2745758, GSM2745759, GSM2745760, GSM2745761, GSM2745762, GSM2745763, GSM2745764, GSM2745765, GSM2745766, GSM2745767, GSM2745768, GSM2745769, GSM2745770, GSM3564558, GSM3564559, GSM3564560, GSM3564561, GSM3564562, GSM3564563, GSM3564564, GSM4355779, GSM4355780, GSM4355782, GSM4355783, GSM4355784, GSM4355786, GSM4560084, GSM4560085, GSM4560086, GSM4560087, GSM4560088, GSM4560089, GSM4560090, GSM4560091, GSM4560092, GSM4560093, GSM4560094, GSM4560095, GSM4645072, GSM4645073, GSM4645074, GSM4645075, GSM4645076, GSM4645077, GSM4645078, GSM4645079, GSM4645080, GSM4645081, GSM4645082, GSM4822446, GSM4822447, GSM4822448, GSM4822449, GSM4822450, GSM4822451, GSM4822452, GSM4822453, GSM4822454, GSM4822455, GSM4822456, GSM4822457, GSM5493604, GSM5493605, GSM5493606, GSM5493607, GSM5493608, GSM5493609, GSM5493610, GSM5493611, GSM5493612, GSM5493613, GSM5493614, GSM5493615, GSM5493616, GSM5493617, GSM5493618, GSM5493619, GSM5493620, GSM5493621, GSM5493622, GSM5493623, GSM5493624, GSM5493625, GSM5493626, GSM5493627, GSM6047841, GSM6047842, GSM6047843, GSM6047844, GSM6047845, GSM6047846, GSM6047847, GSM6047848, GSM6047849, GSM6047850, GSM6047851, GSM6047852, GSM6047853, GSM6047854, GSM6047855, GSM6047856, GSM6047857, GSM6047858, GSM6112198, GSM6112199, GSM6112200, GSM6112201, GSM6112202, GSM6112203, GSM6112204, GSM6112205, GSM6112206, GSM6112207, GSM6112208, GSM6329622, GSM6329623, GSM6329624, GSM6329625, GSM6329626, GSM6329627, GSM7838676, GSM7838677, GSM7838678, GSM7838679, GSM7838680, GSM7838681, GSM7838682, GSM7838683, GSM7838684, GSM7838685, GSM7838686, GSM7838687, GSM7838688, GSM7838689, GSM7838690, GSM7838691, GSM7838692, GSM7838693, GSM7971909, GSM7971910, GSM7971911, GSM7971912, GSM7971913, GSM7971914
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| Series (19)
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| GSE84036 |
Type-I-Interferons induce the decimation of antiviral B cells at the onset of chronic infection [nanostring] |
| GSE84038 |
Type-I-Interferons induce the decimation of antiviral B cells at the onset of chronic infection |
| GSE84039 |
Development of live-attenuated lymphocytic choriomeningitis virus vectors for potent alarmin-driven CD8+ T cell induction in tumor immunotherapy |
| GSE102735 |
Cyclooxygenase gene (Ptgs) exchange and differentially regulated inflammatory pathways in peritoneal macrophages |
| GSE125170 |
Taenia crassiceps excreted/secreted products alters the microRNA profile and regulates the pro-inflammatory response of M1 macrophages [mRNA] |
| GSE125172 |
Taenia crassiceps excreted/secreted products alters the microRNA profile and regulates the pro-inflammatory response of M1 macrophages |
| GSE146022 |
Th1/Th2 cross-regulation controls early Leishmania infection in the skin by modulating the size of the permissive monocytic host cell reservoir |
| GSE150878 |
Differential expression of genes associated with inflammation in KC (Kupffer cells) and MNCs (blood monocytes): |
| GSE153488 |
Mouse immune cells response Interleukin-33 (IL-33) [nanostring] |
| GSE153489 |
Cerebral immune cells in the Interleukin-33 (IL-33) driven tumor microenvironment |
| GSE159197 |
Differential expression of genes associated with inflammation in KC (Kupffer cells) after partial hepatoctomy |
| GSE159199 |
mRNA and microRNA profiles in KC (Kupffer cells) after partial hepatoctomy |
| GSE181253 |
The potent and selective RIPK2 inhibitor BI 706039 improves intestinal inflammation in the TRUC mouse model of Inflammatory Bowel Disease |
| GSE200985 |
ADAR1 mutation causes ZBP1-dependent immunopathology I |
| GSE200986 |
ADAR1 mutation causes ZBP1-dependent immunopathology II |
| GSE202378 |
New, Potent, Small Molecule Agonists of Tyrosine Kinase Receptors Improve Dry Eye Disease |
| GSE207990 |
Chemotherapy-induced complement signaling modulates immunosuppression and metastatic relapse in breast cancer |
| GSE245208 |
nCounter Mouse Inflammation (V2) Panel on Muscle from Cancer Cachexia Models |
| GSE250046 |
Inhibition of UV-Induced Stress Signaling and Inflammatory Responses in SKH-1 Mouse Skin by Topical Small Molecule PD-L1 Blockade |
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| Data table header descriptions |
| ID |
Official Symbol |
| GB_ACC |
GenBank Accession number |
| Alias |
Alias / Previous Symbol |
| Code_Class |
Class of target (Endogenous, Housekeeping, Negative, Positive) |
| SEQUENCE |
Targeted sequence |
| Official Full Name |
Official Full Name |
| SPOT_ID |
Control |
| Data table |
| ID |
GB_ACC |
Alias |
Code_Class |
SEQUENCE |
Official Full Name |
SPOT_ID |
| C1s |
NM_144938.2 |
AA959438, AI255193, AI327365, C1sa |
Endogenous |
GGCAGGGTTGATCACTGAGCCGTGTTGGTTATTCAGTTACTATTGCTAACAACATGGCAGAAACCCTTCTATCTTGCGCTATTCCACAGGGATATCTTAT |
complement component 1, s subcomponent |
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| C4a |
NM_011413.2 |
Slp |
Endogenous |
TCCTCTGGGGGCTGGCTTGGGTGTTCAGCTTCTGTGCCTCATCCCTGCAGAAGCCCAGGTTGCTCCTGTTTTCCCCTTCTGTGGTTAATTTGGGGACTCC |
complement component 4A (Rodgers blood group) |
|
| C7 |
XM_356827.6 |
A530026G17, Gm1238 |
Endogenous |
AGACAAATGTGAAAATGTGGCTAACCCTTCCTGCAACATTGATAAGCCTCCTCCCAACATAGAACTTACCGGTTATGGTTACAACGTAGTTACTGGCCAG |
complement component 7 |
|
| Ccl19 |
NM_011888.2 |
CKb11, ELC, MIP3B, Scya19, exodus-3 |
Endogenous |
CTTCTGCCAAGAACAAAGGCAACAGCACCAGAAGGAGCCCTGTGTCTTGAGTAAAGAGATGTGAATCACTCTGGCCCAGGAAACCAAGGACCAGAAGAGA |
chemokine (C-C motif) ligand 19 |
|
| Ccl21a |
NM_011124.4 |
6CKBAC2, 6Ckine, ALP, AW987545, CKb9, SCYA21a, SLC, Scya21, Scya21b, Tca4, plt |
Endogenous |
TTAAGTACAGCCAGAAGAAAATTCCCTACAGTATTGTCCGAGGCTATAGGAAGCAAGAACCAAGTTTAGGCTGTCCCATCCCGGCAATCCTGTTCTCACC |
chemokine (C-C motif) ligand 21A (serine) |
|
| Ccl8 |
NM_021443.2 |
1810063B20Rik, AB023418, HC14, MCP-2, Mcp2, Scya8 |
Endogenous |
ACCTGCTGCTTTCATGTACTAAAGCTGAAGATCCCCCTTCGGGTGCTGAAAAGCTACGAGAGAATCAACAATATCCAGTGCCCCATGGAAGCTGTGGTTT |
chemokine (C-C motif) ligand 8 |
|
| Chi3l3 |
NM_009892.1 |
|
Endogenous |
AGAGGAGCTTTACACAATGATTTGTCCTTGAAACTCTCAGAATAAGATCAAGTTCAACGGTTTTTCCACAGCGCATTCTGCATCATGCTTCCATGGAGAA |
chitinase 3-like 3 |
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| Defa-rs1 |
NM_007844.2 |
2010300L12Rik, 2010319H24Rik, CRS1C, CRS1C-2, CRS1C-5, Defcr-rs1 |
Endogenous |
GCAAAATAAAACTGCAATCACCACCCAAGCTCCAAATACACAGCATAAAGGCTGTTGAGCTGAATGTGGAATCTGGGTTGAGATGACCATTTGCTTTTGG |
defensin, alpha, related sequence 1 |
|
| Ifit3 |
NM_010501.1 |
Ifi49, P49 |
Endogenous |
AATTGTGGTGGATTCTTGGCAGTTGCAGGGATAAAGGAGTGGCTGAATGGTTTTGGGGTTTGGGAGGCAACGCACTTTGGGGCACAGGCAGGCTTTTCCT |
interferon-induced protein with tetratricopeptide repeats 3 |
|
| Ifna1 |
NM_010502.2 |
Ifa1 |
Endogenous |
CTGCAAGGCTGTCTGATGCAGCAGGTGGGGGTGCAGGAATTTCCCCTGACCCAGGAAGATGCCCTGCTGGCTGTGAGGAAATACTTCCACAGGATCACTG |
interferon alpha 1 |
|
| Il1a |
NM_010554.4 |
Il-1a |
Endogenous |
ACCTCTGAAACGTCAAAGATGTCCAACTTCACCTTCAAGGAGAGCCGGGTGACAGTATCAGCAACGTCAAGCAACGGGAAGATTCTGAAGAAGAGACGGC |
interleukin 1 alpha |
|
| Il22 |
NM_016971.1 |
IL-22, IL-22a, ILTIFa, Iltif |
Endogenous |
AGAAGAATGTCAGAAGGCTGAAGGAGACAGTGAAAAAGCTTGGAGAGAGTGGAGAGATCAAGGCGATTGGGGAACTGGACCTGCTGTTTATGTCTCTGAG |
interleukin 22 |
|
| Rhoa |
NM_016802.4 |
Arha, Arha1, Arha2 |
Endogenous |
CCTGAGGCAGTTATACTTTGGAGGTGGCATAGCCTTTCTCACCTGGACTGCAGGGTCTGGCTCTAAGTCACAGTGCTCCTTTCTCCACACTGTATCCAAG |
ras homolog gene family, member A |
|
| Ager |
NM_007425.2 |
RAGE |
Endogenous |
CAACTACCGAGTCCGAGTCTACCAGATTCCTGGGAAGCCAGAAATTGTGGATCCTGCCTCTGAACTCACAGCCAGTGTCCCTAATAAGGTGGGGACATGT |
advanced glycosylation end product-specific receptor |
|
| Alox12 |
NM_007440.4 |
9930022G08Rik, Alox12p, P-12LO |
Endogenous |
TGAGAATCCCAAGTGCTCTCTATGCTCGGGATGCTTTACAGCTCTGGGAAGTCACTGCCAGGTATGTGAAGGGGATGGTCCATCTCTTCTACCAGAGTGA |
arachidonate 12-lipoxygenase |
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| Alox15 |
NM_009660.3 |
12-LO, 12/15-LO, 15-LOX, Alox12l, L-12LO |
Endogenous |
CCCTGCAGCTCTGGCAAGTCATGAATCGGTACGTGGTGGGAATGTTCGATCTCTACTACAAGACCGACCAAGCTGTTCAGGATGACTATGAACTGCAGAG |
arachidonate 15-lipoxygenase |
|
| Alox5 |
NM_009662.2 |
5-LO, 5-LOX, 5LO, 5LX, AI850497, F730011J02 |
Endogenous |
CAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCCATCAAACGATCACCCACCTTCTGCGCACGCATCTGGTGTCTGAGGTGTTTGGTATCGCCATGTAC |
arachidonate 5-lipoxygenase |
|
| Areg |
NM_009704.3 |
AR, Sdgf |
Endogenous |
AAGATTACTTTGGTGAACGGTGTGGAGAAAAATCCATGAAGACTCACAGCGAGGATGACAAGGACCTATCCAAGATTGCAGTAGTAGCTGTCACTATCTT |
amphiregulin |
|
| Arg1 |
NM_007482.3 |
AI, AI256583, Arg-1, PGIF |
Endogenous |
GTACATTGGCTTGCGAGACGTAGACCCTGGGGAACACTATATAATAAAAACTCTGGGAATTAAGTATTTCTCCATGACTGAAGTAGACAAGCTGGGGATT |
arginase, liver |
|
| Atf2 |
NM_001025093.1 |
Atf-2, CRE-BP, Creb2, D130078H02Rik, D18875, Tg(Gzma-Klra1)7Wum, mXBP |
Endogenous |
GCAATTGTAAAGTAGAAGTGCATAGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAGCGCTCGTTTTAAATCAGTCTGTACTCAGCA |
activating transcription factor 2 |
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Total number of rows: 270
Table truncated, full table size 48 Kbytes.
| Supplementary data files not provided |
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