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Platform GPL25526

Query DataSets for GPL25526

Status

Public on Sep 04, 2018

Title

Illumina NovaSeq 6000 (Homo sapiens; Mus musculus)

Technology type

high-throughput sequencing

Distribution

virtual

Organisms

Homo sapiens; Mus musculus

Submission date

Sep 04, 2018

Last update date

Sep 04, 2018

Contact name

GEO

Country

USA

Samples (601)

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GSM3374612, GSM3496505, GSM3496506, GSM3629670, GSM3629671, GSM3629672

Series (97)

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GSE115612	scSLAM-seq reveals core features of transcription dynamics in single cells
GSE119428	Recovery and analysis of transcriptome subsets from pooled single-cell RNA-seq libraries
GSE120992	AP-1 is a temporally regulated dual gatekeeper of reprogramming to pluripotency (ATAC-Seq)

GSE121053	AP-1 is a temporally regulated dual gatekeeper of reprogramming to pluripotency
GSE127171	Spatially patterned scaffolds enhances vascular organization and functional integration in volumetrc muscle loss
GSE129578	MULTI-seq: Universal sample multiplexing for single-cell RNA sequencing using lipid-tagged indices
GSE134004	Small RNA transcriptome analysis by parallel single cell small RNA sequencing (PSCSR-seq)
GSE134311	scRCAT-seq: simultaneously profile RNA TSS and TES at single-cell level
GSE141861	Secondary Resistance to Anti-EGFR Therapy by Transcriptional Reprogramming in Patient-Derived Colorectal Cancer Models
GSE147808	SCITO-seq: single-cell combinatorial indexed cytometry sequencing
GSE147948	Microglia coordinate the anti-tumor immune response to breast cancer brain metastasis [MITRG 10X data]
GSE147949	Microglia coordinate the anti-tumor immune response to breast cancer brain metastasis
GSE148495	Generation of a functional, patient specific human thymus from induced pluripotent stem cell in vivo
GSE148907	Generation of eosinophils with potent antitumor activity from human pluripotent stem cells
GSE152867	In Vivo Chimeric Alzheimer’s Disease Modeling of Apolipoprotein E4 Toxicity in Human Neurons
GSE153113	CASB: A concanavalin A-based sample barcoding strategy for single-cell sequencing [mixed Sample of cell lines and organisms]
GSE153116	CASB: A concanavalin A-based sample barcoding strategy for single-cell sequencing
GSE155286	SARS-CoV-2 infection is effectively treated and prevented by EIDD-2801
GSE158175	ScRNA-Seq of Fresh Mouse Glioblastoma Cells and Mouse Glioblastoma Cell line
GSE163781	Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling [10x]
GSE163793	Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling
GSE163971	POLYseq: A poly(ß-amino ester)-based vector for multifunctional cellular barcoding
GSE164430	Spatially resolved single-cell RNA-sequencing reveals expression heterogeneity in tumor microenvironment
GSE168620	Ultra-high throughput single-cell RNA sequencing by combinatorial fluidic indexing
GSE173244	Mouse spinal cords transplanted with human iPS cell-derived neural cells with and without chemogenetic stimulations on 14-days and 42-days after spinal cord injury.
GSE173245	Stimulation to human iPS cell derived neural stem/progenitor cells
GSE174361	Gene expression profile in prostate cancer xenograft tumors after FGFRL1 knockdown
GSE176588	Droplet-based Single-cell Total RNA-seq Reveals Differential Non-Coding Expression and Splicing Patterns during Mouse Development
GSE178221	SpotClean adjusts for spot swapping in spatial transcriptomics data
GSE183187	Total RNA-seq from Patient-Derived Xenograft models of Breast Cancer developed at Baylor College of Medicine
GSE183221	Identification of gene expression alteration in macrophage cells with oncolytic HSV
GSE185002	NGS Analysis of human mRNAs in mouse cells following a 12-hr 2D-coculture
GSE186027	A Developmentally Prometastatic Niche in Neonatal Liver to Hepatoblastoma mediated by Cxcl1/Cxcr2 Axis
GSE188512	High throughput single cell epigenomic profiling by targeted insertion of promoters (TIP-seq)
GSE189014	Podocalyxin-Like Protein 1 Regulates Extended and Primed Pluripotency through the Cholesterol Biosynthesis Pathway
GSE189226	Type I Interferon Signaling Mediates Microglial Dysfunction and Senescence in Human-Mouse Chimeric Brain Models of Down Syndrome and Alzheimer’s Disease [single-cell RNA-seq]
GSE189227	Type I Interferon Signaling Mediates Microglial Dysfunction and Senescence in Human-Mouse Chimeric Brain Models of Down Syndrome and Alzheimer’s Disease
GSE194066	Study of HBV and HDV transcriptomic modulation
GSE194181	HBV and HDV transcriptomic modulation
GSE197409	A single-cell liver atlas of relapsing human malaria [scRNA-seq]
GSE197459	A single-cell liver atlas of relapsing human malaria
GSE199272	Transcriptome Analaysis of humanized lungs in COVID-19 [scRNAseq]
GSE200562	Transcriptome Analaysis of humanized lungs in COVID-19
GSE201647	SSN-seq: Multiplexed single-cell transcriptomic profiling via genetic barcoding with shielded small nucleotides
GSE206062	Development of an AAV-LK03 variant with improved liver lobular biodistribution in the humanised FRG model
GSE206102	Neuronal γ-secretase regulates lipid metabolism, linking cholesterol to synaptic dysfunction in Alzheimer's disease
GSE206322	Young human glial progenitor cells outcompete and replace older and diseased human cells when transplanted into adult human glial chimeric mice
GSE207225	Ultra-deep 3D genome structure mapping with Region Capture Micro-C
GSE207308	SHARE-seqV2 for single-cell epigenomic and transcriptomic mapping of human hematopoiesis at scale
GSE207809	Development of an AAV-LK03 variant with improved liver lobular biodistribution in the humanised FRG model II
GSE210751	Co-culture of human prostate cancer cells and mouse osteoblasts as a model for tumor dormancy in bone metastasis
GSE211373	RNA data of MKN45 tumours treated with ERY974 and/or capecitabine in huNOG mice
GSE211803	The immunogenicity of human kidney organoids
GSE212658	Preclinical optimization of a GPC2-targeting CAR T cell therapy for neuroblastoma
GSE214105	Cerebral organoids display dynamic clonal growth with lineage replenishment
GSE215901	SPATAC-seq: split-pool ligation-based single cell ATAC-seq method
GSE216189	Fragment-sequencing unveils local tissue microenvironments at single cell resolution
GSE217499	Single-cell transcriptional profiles of different tissue-derived myeloid cells from naïve and MDA-MB-231 tumor-bearing humanized mice
GSE218206	RevGel-seq: instrument-free single-cell RNA sequencing using a reversible hydrogel for cell-specific barcoding [NIH-HEK_perf_Scipio]
GSE218209	RevGel-seq: instrument-free single-cell RNA sequencing using a reversible hydrogel for cell-specific barcoding [scRNA-seq_stopping_Scipio]
GSE218213	RevGel-seq: instrument-free single-cell RNA sequencing using a reversible hydrogel for cell-specific barcoding
GSE218242	Circadian rhythm-dependent programs control inflammatory responses and drug metabolism in primary human hepatocytes I.
GSE218243	Circadian rhythm-dependent programs control inflammatory responses and drug metabolism in primary human hepatocytes II.
GSE218244	Circadian rhythm-dependent programs control inflammatory responses and drug metabolism in primary human hepatocytes
GSE220435	Single-cell analysis reveals dynamic changes of A549 cells in monolayer, A549 xenografts in nude mice, and xenografts after exposure to dacomitinib
GSE222791	Synergistic immunochemotherapy exerts efficiently anti-hepatocellular carcinoma effect to induce SAMD4B-APOA2 axis for inhibition of tumor immune evasion
GSE223026	Human CD4 cytotoxic T lymphocytes mediate potent tumor control via tumor cell HLA 2 class II expression in a humanized immune system mouse model
GSE223550	Secretion encoded single-cell sequencing (SEC-seq) uncovers gene expression signatures associated with high VEGF-A secretion in mesenchymal stromal cells
GSE224081	Transgene-free haematopoietic stem and progenitor cells from human induced pluripotent stem cells
GSE224347	Merlin rescue drives Wnt signalling
GSE228002	Foreign RNA spike-ins enable accurate allele-specific expression analysis at scale [I]
GSE228004	Foreign RNA spike-ins enable accurate allele-specific expression analysis at scale [III]
GSE228009	Foreign RNA spike-ins enable accurate allele-specific expression analysis at scale
GSE229517	Resistance to PRMT5-targeted therapy in mantle cell lymphoma
GSE230316	DNA-guided transcription factor cooperativity shapes face and limb mesenchyme [ChIP-seq]
GSE230319	DNA-guided transcription factor cooperativity shapes face and limb mesenchyme
GSE230706	Cutaneous squamous cell carcinoma-derived extracellular vesicles exert an oncogenic role by activating cancer-associated fibroblasts
GSE232450	Dissecting the sequence and structural determinants guiding m6A deposition and evolution via inter- and intra-species hybrids
GSE233170	The transcriptome profiling of multi-cell types by the droplet based full-length single-cell transcript sequencing
GSE234614	Osteosarcoma uses host-derived growth factors to drive ERK phosphorylation and MCL1 expression to survive in the metastatic environment
GSE235152	The transpeptidase sortase A, binds nucleic acids, which can be used and to mediates their cell labeling
GSE236378	Deep dynamical modelling of developmental trajectories with temporal transcriptomics [SPECIES_MIXTURE_DATA]
GSE236520	Deep dynamical modelling of developmental trajectories with temporal transcriptomics
GSE236681	Targeting Metabolic Adaptations in the Breast Cancer–Liver Metastatic Niche Using Dietary Approaches to Improve Endocrine Therapy Efficacy
GSE237166	Pan-cancer single-nucleus total RNA sequencing using HH-seq
GSE238001	Concurrent profiling of multiscale 3D genome organization and gene expression in single mammalian cells
GSE239651	Single-cell lineage tracing of ispinesib-resistant glioma cells
GSE244521	Assessment of myogenic maturation for human iPSC-derived iPAX7 myogenic progenitors in vitro and in vivo
GSE244725	Harnessing HetHydrogel: An Approach to Single-Cell Multi-Omics
GSE253623	Therapeutic potential of human microglial transplantation in a chimeric model of CSF1R-related leukoencephalopathy
GSE253754	Single-cell multiplex chromatin and RNA interactions in aging human brain
GSE254890	Single cell profiling of SW480 subtype-specific subcutaneous and orthotopic xenografts (SW480-CBC and SW480-RSC) as presented in "Colorectal Cancer Stem Cell Subtypes Orchestrate Distinct Tumor Microenvironments" [scRNA-seq]
GSE256434	Flexible and high-throughput simultaneous profiling of gene expression and chromatin accessibility in single cells
GSE261475	Engineered CD47 protects T cells for enhanced antitumor immunity
GSE265962	RoCK and ROI: a single-cell RNA-sequencing method with enhanced transcriptome information via targeted enrichment of transcripts and preselected, region-specific sequencing I
GSE266117	RoCK and ROI: a single-cell RNA-sequencing method with enhanced transcriptome information via targeted enrichment of transcripts and preselected, region-specific sequencing II
GSE266161	RoCK and ROI: a single-cell RNA-sequencing method with enhanced transcriptome information via targeted enrichment of transcripts and preselected, region-specific sequencing

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Supplementary data files not provided