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Series GSE3675 Query DataSets for GSE3675
Status Public on Feb 01, 2006
Title Gene expression profiles during the development of compensated or decompensated hypertrophy during pressure overload
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary We recently introduced a modification of the established monocrotaline (MCT) model for pulmonary hypertension (PH) and subsequent right ventricular (RV) hypertrophy, which allows for the selective induction of either a compensate or decompensated RV hypertrophic phenotype within four weeks after a single subcutaneous MCT injection. Both doses of 30 or 80 mg/kg body weight lead to an intermediate phase of compensated RV hypertrophy (day 14-19), while the former dose leads to a stable compensated phenotype (HYP) and the latter dose progresses towards decompensated ventricular hypertrophy and RV failure (CHF) around day 25-28 (Buermans et. al, Physiological Genomics 2005). This model provides the unique opportunity to characterize the development of either hypertrophic phenotype during the very early stages after imposition of RV pressure overload remodeling, well before phenotypical differences have become apparent. This experiment series describes gene expression profiles, generated by spotted oligonucleotide microarrays, to characterize and compare the expression of ~4800 genes from the RV of HYP, CHF and time matched control rats at 10, 19 and 25 days after injections. RV samples were hybridized against a common reference pool, prepared from total RNA isolated from the interventricular septum wall from animals at day 19 and 25.
Keywords: dose response x time course
 
Overall design Comparison of three groups (Controls, 30mg MCT/kg bw, 80 mg MCT/kg bw) on three time points (day10, 19, 25). Three samples pee groups per time point = 27 arrays. Hybridized against a common reference pool.
 
Contributor(s) Buermans H, Simonides W
Citation(s) 15728335
Submission date Nov 24, 2005
Last update date Apr 23, 2012
Contact name Henk Buermans
E-mail(s) h.buermans@lumc.nl
Phone +31715268558
Organization name Leiden University Medical Center
Department Human Genetics
Lab Leiden Genome Technology Center
Street address Albinusdreef 2
City Leiden
State/province ZH
ZIP/Postal code 2300 RC
Country Netherlands
 
Platforms (1)
GPL1397 Compugen Rat 5K - 65nt
Samples (27)
GSM85063 RV82.01_CONTROL_day10_Slide53
GSM85064 RV82.03_CONTROL_day10_Slide54
GSM85065 RV83.02_CONTROL_day10_Slide52
Relations
BioProject PRJNA93809

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Supplementary file Size Download File type/resource
GSE3675_RAW.tar 44.9 Mb (http)(custom) TAR (of IMAGENE)

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