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GEO accession:
Series GSE3435
Query DataSets for GSE3435
Status
Public on Apr 14, 2006
Title
Human ependymomas.
Organism
Homo sapiens
Experiment type
Genome variation profiling by genome tiling array
Summary
Whole-genome screening of DNA-copy number changes by array-based or matrix comparative genomic hybridization (matrix-CGH).
Keywords: Repeat sample.
Overall design
Tumor DNA (Cy3) was hybridized against a single standard reference DNA-pool (Cy5) of the opposite sex than the patient.
Contributor(s)
Mendrzyk F
Citation(s)
16609018
Submission date
Oct 11, 2005
Last update date
Mar 16, 2012
Contact name
Frank Mendrzyk
E-mail(s)
f.mendrzyk@dkfz.de
Phone
49-6221-424676
Organization name
German Cancer Research Center (DKFZ)
Street address
City
Heidelberg
ZIP/Postal code
69120
Country
Germany
Platforms (1)
GPL2920
DKFZ Homo sapiens 6k-array, version 3/4, upgrade
Samples (68)
Less...
More...
GSM77088
1EP1
GSM77089
1EP2
GSM77090
1EP3
GSM77491
1EP4
GSM77492
1EP5
GSM77493
1EP7
GSM77494
1EP8
GSM77495
1EP9
GSM77496
1EP10
GSM77497
1EP11
GSM77498
1EP12
GSM77499
1EP13
GSM77500
1EP14
GSM77501
1EP15
GSM77502
1EP16
GSM77503
1EP17
GSM77504
1EP19
GSM77505
1EP20
GSM77506
1EP21
GSM77507
1EP22
GSM77508
1EP23
GSM77509
1EP24
GSM77510
1EP25
GSM77511
1EP26
GSM77512
1EP29
GSM77513
1EP31
GSM77514
1EP32
GSM77515
1EP33
GSM77516
1EP36
GSM77517
1EP37
GSM77518
1EP38
GSM77519
1EP39
GSM77520
2EP1
GSM77521
2EP2
GSM77522
2EP3
GSM77523
2EP4
GSM77524
2EP5
GSM77525
2EP6
GSM77526
2EP7
GSM77527
2EP8
GSM77528
2EP9
GSM77529
2EP10
GSM77530
2EP11
GSM77531
2EP12
GSM77532
2EP13
GSM77533
2EP14
GSM77534
2EP15
GSM77535
2EP16
GSM77536
2EP17
GSM77537
2EP18
GSM77538
2EP19
GSM77539
2EP20
GSM77540
2EP21
GSM77541
2EP22
GSM77542
2EP23
GSM77543
2EP24
GSM77544
2EP25
GSM77545
2EP26
GSM77546
2EP27
GSM77547
2EP28
GSM77548
2EP29
GSM77549
2EP30
GSM77550
2EP31
GSM77551
2EP32
GSM77552
2EP33
GSM77553
2EP34
GSM77554
2EP35
GSM77555
2EP36
Relations
BioProject
PRJNA93471
Final filtered log ratios of the corresponding tumors (Cy3/Cy5) header descriptions
ID
1EP1
1EP2
1EP3
1EP5
1EP7
1EP8
1EP9
1EP10
1EP11
1EP12
1EP13
1EP14
1EP15
1EP16
1EP17
1EP19
1EP21
1EP22
1EP23
1EP24
1EP25
1EP26
1EP29
1EP32
1EP33
1EP36
1EP37
1EP39
2EP1
2EP2
2EP3
2EP5
2EP6
2EP7
2EP8
2EP9
2EP10
2EP11
2EP12
2EP13
2EP15
2EP16
2EP17
2EP18
2EP19
2EP20
2EP21
2EP22
2EP23
2EP24
2EP25
2EP27
2EP28
2EP29
2EP30
2EP31
2EP32
2EP34
2EP35
2EP36
1EP4
1EP20
1EP31
1EP38
2EP4
2EP14
2EP26
2EP33
Data table
ID
1EP1
1EP2
1EP3
1EP5
1EP7
1EP8
1EP9
1EP10
1EP11
1EP12
1EP13
1EP14
1EP15
1EP16
1EP17
1EP19
1EP21
1EP22
1EP23
1EP24
1EP25
1EP26
1EP29
1EP32
1EP33
1EP36
1EP37
1EP39
2EP1
2EP2
2EP3
2EP5
2EP6
2EP7
2EP8
2EP9
2EP10
2EP11
2EP12
2EP13
2EP15
2EP16
2EP17
2EP18
2EP19
2EP20
2EP21
2EP22
2EP23
2EP24
2EP25
2EP27
2EP28
2EP29
2EP30
2EP31
2EP32
2EP34
2EP35
2EP36
1EP4
1EP20
1EP31
1EP38
2EP4
2EP14
2EP26
2EP33
G000001
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0.075319656
0.188859471
0.10408235
0.284927899
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0.088173943
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0.277070073
0.069859199
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0.020012236
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0.011405549
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0.220758454
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0.041862759
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0.019768747
G000002
-0.019111648
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0.142219647
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0.028050878
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0.030887401
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0.084755625
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0.088118252
0.023514149
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0.163213037
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0.226192874
0.021347387
0.007993553
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0.032108523
0.025180952
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0.124766365
0.033082329
0.005778048
0.321523157
0.038263038
0.011960229
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-0.207717703
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0.014419583
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-0.147487515
G000003
0.012401602
-0.171997727
0.093301472
0.022918355
0.161121487
0.151465855
-0.015717406
0.162363638
0.220798939
0.152739462
0.113724429
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-0.055345274
0.088401961
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0.115300143
-0.107774357
0.143188071
0.115116822
0.070206976
0.07394983
-0.166952443
-0.082128985
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0.139477463
0.139930717
0.029345181
0.242868049
0.306352349
-0.06834076
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-0.158063274
-0.108627415
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-0.334634769
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0.016897189
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0.036321314
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0.166587505
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0.106473097
0.151411003
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0.143771759
0.039688029
0.036595755
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-0.19883185
-0.108453183
-0.145751128
0.160629894
-0.199360276
-0.017252475
-0.070177951
G000004
-0.189438246
-0.119378086
-0.045398466
-0.140322752
0.139519457
-0.034590987
-0.14615634
-0.015682024
0.025928437
0.056516717
-0.138395143
-0.189163686
-0.120796229
-0.251843322
-0.027158237
-0.036986242
-0.278483764
-0.072448717
-0.135002713
0.021249556
0.094371323
0.048183312
0.025084289
0.017752349
-0.002919992
-0.026106976
-0.005758702
-0.256429599
0.137195353
0.244020413
-0.038030947
-0.060580897
-0.248676001
-0.047792574
0.004204961
-0.629233725
-0.057318703
-0.498530902
-0.163105553
0.013205148
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-0.127672276
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0.045775193
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-0.099829936
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0.002712584
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-0.031727632
0.011491211
0.061638814
-0.066916022
0.010681771
-0.091656209
-0.526960733
-0.341369952
-0.32696688
-0.055491789
-0.294505021
-0.068030159
-0.125585302
G000005
-0.167182843
-0.418506978
-0.021186945
-0.041535296
0.078737662
-0.062426019
-0.064966003
-0.000902969
0.078503528
-0.161358971
-0.23048201
-0.190395558
-0.053779427
-0.553924393
-0.100436552
-0.177060166
-0.065681294
-0.099648047
-0.34244776
-0.073177641
0.009727669
0.022045105
0.092838448
-0.289969696
-0.149298683
0.061737606
-0.018807821
-0.120963929
-0.14283445
-0.123669154
0.298092547
0.109025118
-0.118195954
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-0.120882697
-0.117541677
-0.666457789
-0.297718949
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-0.276409917
0.025492877
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-0.306987666
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-0.171439221
0.111881435
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0.111979614
-0.140016628
0.025913175
-0.057852599
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0.05349292
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-0.309918613
-0.681011456
-0.595900826
-0.180425036
-0.358833833
-0.15734971
0.029046225
G000006
0.021476373
-0.270741552
0.075481555
-0.165013469
0.033294059
0.035349199
-0.121762066
-0.007534695
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0.07861729
-0.12530681
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0.043832327
0.093485313
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0.241016068
0.10520059
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0.111744864
0.250490324
0.041401968
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0.027061082
0.048068598
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0.040696441
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0.044976051
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0.084793951
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0.103560824
0.093205918
0.046650801
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0.016309502
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0.086495673
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-0.16361639
-0.282897546
-0.287833907
-0.049398057
-0.258879929
-0.168409853
-0.120361864
G000007
0.178631515
-0.224951043
0.21012187
0.08876083
0.022884245
0.11910956
0.082411885
0.090656207
0.083037665
0.163245661
0.084221625
-0.026162843
-0.02609817
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-0.046154226
0.125837522
0.112424402
0.019904434
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0.020170367
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0.215524528
0.076171794
0.038097988
0.187749743
0.308999995
0.020677416
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0.018860334
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0.009814036
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0.120560374
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0.636769939
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0.117665863
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0.105454371
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0.040835755
G000008
-0.019844729
-0.121837435
0.083479043
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0.003466841
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G000009
-0.000101355
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0.095214981
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G000010
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G000011
-0.064128211
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0.018769357
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0.045840841
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0.02251941
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G000012
-0.105562766
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-0.07683668
-0.3432819
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Total number of rows:
6465
Table truncated, full table size
4901 Kbytes
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