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Series GSE5013 Query DataSets for GSE5013
Status Public on Sep 30, 2006
Title Global variation of copy number in the human genome_EA
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
SNP genotyping by SNP array
Summary Identify and categorize copy number variation in normal populations
Keywords: Copy number variation detection
Overall design 270 Hapmap samples were hybridized to 500K EA mapping arrays (Nsp and Sty) to identifying variable copy number regions in the genome. 10 Hapmap samples were hybridized to 500K EA mapping arrays in triplicate to determine reproducibility (technical replicates). NA15510 and NA10851 were hybridized to 500K EA mapping arrays in triplicate for parameter-tuning and validation of algorithm.
Citation(s) 17122850
Submission date Jun 06, 2006
Last update date Mar 16, 2012
Contact name Fan Shen
Phone 408-731-5762
Organization name Affymetrix, Inc
Street address 3420 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
Platforms (2)
GPL3811 Affymetrix GeneChip Early Access Mapping 500K Set Array (250K_Nsp_SNP)
GPL3812 Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP)
Samples (612)
GSM112392 NA06985_Nsp_EA
GSM112393 NA06991_Nsp_EA
GSM112394 NA06993_Nsp_EA
BioProject PRJNA95797

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE5013_GSM112392_GSM112498_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112499_GSM112518_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112519_GSM112538_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112539_GSM112560_RAW.tar 1.3 Gb (ftp)(http) TAR
GSE5013_GSM112561_GSM112580_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112581_GSM112600_RAW.tar 1.3 Gb (ftp)(http) TAR
GSE5013_GSM112601_GSM112620_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112621_GSM112640_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112641_GSM112660_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112662_GSM112688_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112689_GSM112708_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112709_GSM112728_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112729_GSM112748_RAW.tar 1.3 Gb (ftp)(http) TAR
GSE5013_GSM112749_GSM112768_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112769_GSM112788_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112789_GSM112833_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112834_GSM112853_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112854_GSM112873_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112874_GSM112894_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112895_GSM112986_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM112987_GSM113006_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM113007_GSM113031_RAW.tar 1.3 Gb (ftp)(http) TAR
GSE5013_GSM113032_GSM113051_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM113052_GSM113071_RAW.tar 1.4 Gb (ftp)(http) TAR
GSE5013_GSM113072_GSM113108_RAW.tar 1.3 Gb (ftp)(http) TAR
GSE5013_GSM113109_GSM113129_RAW.tar 1.3 Gb (ftp)(http) TAR
GSE5013_GSM113130_GSM113151_RAW.tar 1.3 Gb (ftp)(http) TAR
GSE5013_GSM113152_GSM113181_RAW.tar 1.1 Gb (ftp)(http) TAR
GSE5013_GSM113182_GSM113203_RAW.tar 1.1 Gb (ftp)(http) TAR
GSE5013_GSM113204_GSM113224_RAW.tar 1.1 Gb (ftp)(http) TAR
GSE5013_GSM113225_GSM113237_RAW.tar 668.4 Mb (ftp)(http) TAR
GSE5013_RAW.tar 40.6 Gb (http)(custom) TAR (of CEL, TXT)
GSE5013_README.txt 1.3 Kb (ftp)(http) TXT

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